RNA–Protein interactions for RNA: ENST00000519295.5

AP3B1-204, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene AP3B1, Length 3,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-204ENST00000519295 VPS33BQ9H267 617 aa6.37□□□□□ -1.39
AP3B1-204ENST00000519295 CHST12Q9NRB3 414 aa6.37□□□□□ -1.39
AP3B1-204ENST00000519295 SOS1Q07889 1333 aaPredicted RBP6.37□□□□□ -1.39
AP3B1-204ENST00000519295 COL19A1Q14993 1142 aa6.37□□□□□ -1.39
AP3B1-204ENST00000519295 NEUROD2Q15784 382 aa6.37□□□□□ -1.39
AP3B1-204ENST00000519295 PACS1Q6VY07 963 aa6.37□□□□□ -1.39
AP3B1-204ENST00000519295 SPRYD3Q8NCJ5 442 aa6.37□□□□□ -1.39
AP3B1-204ENST00000519295 AKAP2Q9Y2D5 859 aa6.37□□□□□ -1.39
AP3B1-204ENST00000519295 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.37□□□□□ -1.39
AP3B1-204ENST00000519295 TMEM110-MUSTN1A8MSY1 372 aa6.37□□□□□ -1.39
AP3B1-204ENST00000519295 MTA2O94776 668 aa6.37□□□□□ -1.39
AP3B1-204ENST00000519295 BMS1Q14692 1282 aaKnown RBP6.37□□□□□ -1.39
AP3B1-204ENST00000519295 CLUAP1Q96AJ1 413 aa6.37□□□□□ -1.39
AP3B1-204ENST00000519295 PGAP2Q9UHJ9 254 aa6.37□□□□□ -1.39
AP3B1-204ENST00000519295 N6AMT1Q9Y5N5 214 aa6.37□□□□□ -1.39
AP3B1-204ENST00000519295 CCDC97Q96F63 343 aaPredicted RBP6.36□□□□□ -1.39
AP3B1-204ENST00000519295 SPACA7Q96KW9 195 aa6.36□□□□□ -1.39
AP3B1-204ENST00000519295 NOL10Q9BSC4 688 aaKnown RBP6.36□□□□□ -1.39
AP3B1-204ENST00000519295 RBM28Q9NW13 759 aaKnown RBP6.36□□□□□ -1.39
AP3B1-204ENST00000519295 COL4A5P29400 1685 aa6.36□□□□□ -1.39
AP3B1-204ENST00000519295 IPO7O95373 1038 aaKnown RBP6.36□□□□□ -1.39
AP3B1-204ENST00000519295 ZC3H6P61129 1189 aaKnown RBP6.36□□□□□ -1.39
AP3B1-204ENST00000519295 NSUN2Q08J23 767 aaKnown RBP eCLIP6.36□□□□□ -1.39
AP3B1-204ENST00000519295 ANKRD13DQ6ZTN6 518 aa6.36□□□□□ -1.39
AP3B1-204ENST00000519295 KIAA1211Q6ZU35 1233 aa6.36□□□□□ -1.39
AP3B1-204ENST00000519295 LILRB2Q8N423 598 aa6.36□□□□□ -1.39
AP3B1-204ENST00000519295 CASS4Q9NQ75 786 aa6.36□□□□□ -1.39
AP3B1-204ENST00000519295 KIF7Q2M1P5 1343 aa6.36□□□□□ -1.39
AP3B1-204ENST00000519295 A6NJY4 79 aa6.36□□□□□ -1.39
AP3B1-204ENST00000519295 B4GALT4O60513 344 aa6.36□□□□□ -1.39
AP3B1-204ENST00000519295 TPPPO94811 219 aa6.36□□□□□ -1.39
AP3B1-204ENST00000519295 KANK3Q6NY19 840 aa6.36□□□□□ -1.39
AP3B1-204ENST00000519295 DRAXINQ8NBI3 349 aaPredicted RBP6.36□□□□□ -1.39
AP3B1-204ENST00000519295 PASKQ96RG2 1323 aa6.36□□□□□ -1.39
AP3B1-204ENST00000519295 VAMP4O75379 141 aa6.35□□□□□ -1.39
AP3B1-204ENST00000519295 YY1P25490 414 aa6.35□□□□□ -1.39
AP3B1-204ENST00000519295 INHBCP55103 352 aa6.35□□□□□ -1.39
AP3B1-204ENST00000519295 SRPK2P78362 688 aaKnown RBP6.35□□□□□ -1.39
AP3B1-204ENST00000519295 POU5F1Q01860 360 aaKnown RBP6.35□□□□□ -1.39
AP3B1-204ENST00000519295 BIRC2Q13490 618 aa6.35□□□□□ -1.39
AP3B1-204ENST00000519295 LAPTM5Q13571 262 aa6.35□□□□□ -1.39
AP3B1-204ENST00000519295 E2F5Q15329 346 aa6.35□□□□□ -1.39
AP3B1-204ENST00000519295 FXNQ16595 210 aa6.35□□□□□ -1.39
AP3B1-204ENST00000519295 TOM1L2Q6ZVM7 507 aa6.35□□□□□ -1.39
AP3B1-204ENST00000519295 PLEKHG4BQ96PX9 1271 aa6.35□□□□□ -1.39
AP3B1-204ENST00000519295 SLC4A9Q96Q91 983 aa6.35□□□□□ -1.39
AP3B1-204ENST00000519295 TIMM22Q9Y584 194 aa6.35□□□□□ -1.39
AP3B1-204ENST00000519295 FOCADQ5VW36 1801 aa6.35□□□□□ -1.39
AP3B1-204ENST00000519295 USP42Q9H9J4 1324 aaKnown RBP6.35□□□□□ -1.39
AP3B1-204ENST00000519295 IL13P35225 146 aa6.35□□□□□ -1.39
AP3B1-204ENST00000519295 SPDYCQ5MJ68 293 aa6.35□□□□□ -1.39
AP3B1-204ENST00000519295 C16orf54Q6UWD8 224 aa6.35□□□□□ -1.39
AP3B1-204ENST00000519295 C1orf131Q8NDD1 294 aaKnown RBP6.35□□□□□ -1.39
AP3B1-204ENST00000519295 LILRB1Q8NHL6 650 aaPredicted RBP6.35□□□□□ -1.39
AP3B1-204ENST00000519295 DHRS1Q96LJ7 313 aa6.35□□□□□ -1.39
AP3B1-204ENST00000519295 DRC1Q96MC2 740 aa6.35□□□□□ -1.39
AP3B1-204ENST00000519295 PDGFDQ9GZP0 370 aaPredicted RBP6.35□□□□□ -1.39
AP3B1-204ENST00000519295 SCINQ9Y6U3 715 aa6.35□□□□□ -1.39
AP3B1-204ENST00000519295 HSP90AB1P08238 724 aaKnown RBP6.35□□□□□ -1.39
AP3B1-204ENST00000519295 IMPDH2P12268 514 aa6.35□□□□□ -1.39
AP3B1-204ENST00000519295 PDAP1Q13442 181 aaKnown RBP6.35□□□□□ -1.39
AP3B1-204ENST00000519295 CCDC178Q5BJE1 867 aa6.35□□□□□ -1.39
AP3B1-204ENST00000519295 RBM12BQ8IXT5 1001 aaKnown RBP6.35□□□□□ -1.39
AP3B1-204ENST00000519295 NKAIN3Q8N8D7 197 aa6.35□□□□□ -1.39
AP3B1-204ENST00000519295 LINC00116Q8NCU8 138 aa6.35□□□□□ -1.39
AP3B1-204ENST00000519295 L3MBTL3Q96JM7 780 aaPredicted RBP6.35□□□□□ -1.39
AP3B1-204ENST00000519295 POLKQ9UBT6 870 aa6.35□□□□□ -1.39
AP3B1-204ENST00000519295 BARX2Q9UMQ3 279 aaPredicted RBP6.35□□□□□ -1.39
AP3B1-204ENST00000519295 PSDA5PKW4 1024 aaPredicted RBP6.34□□□□□ -1.39
AP3B1-204ENST00000519295 SSR1P43307 286 aaKnown RBP6.34□□□□□ -1.39
AP3B1-204ENST00000519295 RGS19P49795 217 aa6.34□□□□□ -1.39
AP3B1-204ENST00000519295 ZBED6P86452 979 aa6.34□□□□□ -1.39
AP3B1-204ENST00000519295 ADCY2Q08462 1091 aa6.34□□□□□ -1.39
AP3B1-204ENST00000519295 KIAA1958Q8N8K9 716 aa6.34□□□□□ -1.39
AP3B1-204ENST00000519295 RABGGTAQ92696 567 aa6.34□□□□□ -1.39
AP3B1-204ENST00000519295 IL17RAQ96F46 866 aa6.34□□□□□ -1.39
AP3B1-204ENST00000519295 SWAP70Q9UH65 585 aa6.34□□□□□ -1.39
AP3B1-204ENST00000519295 KINO60870 393 aaKnown RBP6.34□□□□□ -1.39
AP3B1-204ENST00000519295 RPS6KA4O75676 772 aa6.34□□□□□ -1.39
AP3B1-204ENST00000519295 ATG7O95352 703 aa6.34□□□□□ -1.39
AP3B1-204ENST00000519295 PSMC1P62191 440 aaKnown RBP6.34□□□□□ -1.39
AP3B1-204ENST00000519295 KIAA1614Q5VZ46 1190 aa6.34□□□□□ -1.39
AP3B1-204ENST00000519295 PODNQ7Z5L7 613 aa6.34□□□□□ -1.39
AP3B1-204ENST00000519295 RPAP2Q8IXW5 612 aaPredicted RBP6.34□□□□□ -1.39
AP3B1-204ENST00000519295 ANKRD7Q92527 254 aa6.34□□□□□ -1.39
AP3B1-204ENST00000519295 NELL1Q92832 810 aa6.34□□□□□ -1.39
AP3B1-204ENST00000519295 SPOCK3Q9BQ16 436 aa6.34□□□□□ -1.39
AP3B1-204ENST00000519295 OTOFQ9HC10 1997 aa6.34□□□□□ -1.39
AP3B1-204ENST00000519295 CCDC196A0A1B0GTZ2 297 aa6.34□□□□□ -1.39
AP3B1-204ENST00000519295 BICDL2A1A5D9 508 aa6.34□□□□□ -1.39
AP3B1-204ENST00000519295 DYNC1I1O14576 645 aa6.34□□□□□ -1.39
AP3B1-204ENST00000519295 ZNF394Q53GI3 561 aa6.34□□□□□ -1.39
AP3B1-204ENST00000519295 MTERF4Q7Z6M4 381 aaKnown RBP6.34□□□□□ -1.39
AP3B1-204ENST00000519295 AMIGO3Q86WK7 504 aa6.34□□□□□ -1.39
AP3B1-204ENST00000519295 ACAD8Q9UKU7 415 aa6.34□□□□□ -1.39
AP3B1-204ENST00000519295 NEFHP12036 1026 aa6.33□□□□□ -1.4
AP3B1-204ENST00000519295 MAGEA10P43363 369 aaPredicted RBP6.33□□□□□ -1.4
AP3B1-204ENST00000519295 GJC2Q5T442 439 aaPredicted RBP6.33□□□□□ -1.4
AP3B1-204ENST00000519295 MYSM1Q5VVJ2 828 aa6.33□□□□□ -1.4
AP3B1-204ENST00000519295 CEP63Q96MT8 703 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms