RNA–Protein interactions for RNA: ENST00000517181.1

RNU1-54P-201, Transcript of RNA, U1 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU1-54P, Length 120 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-54P-201ENST00000517181 CDC25BP30305 580 aa5.31□□□□□ -1.56
RNU1-54P-201ENST00000517181 CABP4P57796 275 aa5.31□□□□□ -1.56
RNU1-54P-201ENST00000517181 ORC1Q13415 861 aa5.31□□□□□ -1.56
RNU1-54P-201ENST00000517181 KIAA0319Q5VV43 1072 aa5.31□□□□□ -1.56
RNU1-54P-201ENST00000517181 UBASH3BQ8TF42 649 aa5.31□□□□□ -1.56
RNU1-54P-201ENST00000517181 FAM46AQ96IP4 442 aaKnown RBP5.31□□□□□ -1.56
RNU1-54P-201ENST00000517181 NRSN2Q9GZP1 204 aa5.31□□□□□ -1.56
RNU1-54P-201ENST00000517181 MEGF11A6BM72 1044 aa5.3□□□□□ -1.56
RNU1-54P-201ENST00000517181 METTL12A8MUP2 240 aa5.3□□□□□ -1.56
RNU1-54P-201ENST00000517181 NEFLP07196 543 aa5.3□□□□□ -1.56
RNU1-54P-201ENST00000517181 ESRRAP11474 423 aaPredicted RBP5.3□□□□□ -1.56
RNU1-54P-201ENST00000517181 C19orf57Q0VDD7 668 aa5.3□□□□□ -1.56
RNU1-54P-201ENST00000517181 UVSSAQ2YD98 709 aa5.3□□□□□ -1.56
RNU1-54P-201ENST00000517181 ACAD11Q709F0 780 aa5.3□□□□□ -1.56
RNU1-54P-201ENST00000517181 ARMC10Q8N2F6 343 aa5.3□□□□□ -1.56
RNU1-54P-201ENST00000517181 Q8N3U1 123 aa5.3□□□□□ -1.56
RNU1-54P-201ENST00000517181 DNAJC25Q9H1X3 360 aa5.3□□□□□ -1.56
RNU1-54P-201ENST00000517181 FAM177BA6PVY3 158 aa5.29□□□□□ -1.56
RNU1-54P-201ENST00000517181 CPNE3O75131 537 aaKnown RBP5.29□□□□□ -1.56
RNU1-54P-201ENST00000517181 GRIA4P48058 902 aa5.29□□□□□ -1.56
RNU1-54P-201ENST00000517181 IKBKEQ14164 716 aa5.29□□□□□ -1.56
RNU1-54P-201ENST00000517181 DUOXA2Q1HG44 320 aa5.29□□□□□ -1.56
RNU1-54P-201ENST00000517181 XP32Q5T750 250 aa5.29□□□□□ -1.56
RNU1-54P-201ENST00000517181 DMRTB1Q96MA1 342 aa5.29□□□□□ -1.56
RNU1-54P-201ENST00000517181 CEP41Q9BYV8 373 aa5.29□□□□□ -1.56
RNU1-54P-201ENST00000517181 A0A096LPE4 126 aa5.28□□□□□ -1.56
RNU1-54P-201ENST00000517181 A0A1W2PPZ6 126 aa5.28□□□□□ -1.56
RNU1-54P-201ENST00000517181 EIF1AYO14602 144 aaKnown RBP5.28□□□□□ -1.56
RNU1-54P-201ENST00000517181 GLB1P16278 677 aa5.28□□□□□ -1.56
RNU1-54P-201ENST00000517181 ITPKAP23677 461 aa5.28□□□□□ -1.56
RNU1-54P-201ENST00000517181 NLRP12P59046 1061 aa5.28□□□□□ -1.56
RNU1-54P-201ENST00000517181 DSC3Q14574 896 aa5.28□□□□□ -1.56
RNU1-54P-201ENST00000517181 ZMYM1Q5SVZ6 1142 aa5.28□□□□□ -1.56
RNU1-54P-201ENST00000517181 PRPF40BQ6NWY9 871 aaKnown RBP5.28□□□□□ -1.56
RNU1-54P-201ENST00000517181 SLC51AQ86UW1 340 aa5.28□□□□□ -1.56
RNU1-54P-201ENST00000517181 TMPRSS13Q9BYE2 586 aa5.28□□□□□ -1.56
RNU1-54P-201ENST00000517181 LIN7BQ9HAP6 207 aa5.28□□□□□ -1.56
RNU1-54P-201ENST00000517181 LOC100289279A0A1B0GTE1 492 aa5.27□□□□□ -1.57
RNU1-54P-201ENST00000517181 DLGAP3O95886 979 aa5.27□□□□□ -1.57
RNU1-54P-201ENST00000517181 ZNF423Q2M1K9 1284 aa5.27□□□□□ -1.57
RNU1-54P-201ENST00000517181 SPRED3Q2MJR0 410 aa5.27□□□□□ -1.57
RNU1-54P-201ENST00000517181 ANKRD34AQ69YU3 496 aa5.27□□□□□ -1.57
RNU1-54P-201ENST00000517181 TMC7Q7Z402 723 aa5.27□□□□□ -1.57
RNU1-54P-201ENST00000517181 GLIS3Q8NEA6 775 aa5.27□□□□□ -1.57
RNU1-54P-201ENST00000517181 ASAP3Q8TDY4 903 aa5.27□□□□□ -1.57
RNU1-54P-201ENST00000517181 SLC7A3Q8WY07 619 aa5.27□□□□□ -1.57
RNU1-54P-201ENST00000517181 CCDC74AQ96AQ1 378 aa5.27□□□□□ -1.57
RNU1-54P-201ENST00000517181 MYRFLQ96LU7 910 aa5.27□□□□□ -1.57
RNU1-54P-201ENST00000517181 TRAIPQ9BWF2 469 aa5.27□□□□□ -1.57
RNU1-54P-201ENST00000517181 NIF3L1Q9GZT8 377 aa5.27□□□□□ -1.57
RNU1-54P-201ENST00000517181 RNF208Q9H0X6 261 aa5.27□□□□□ -1.57
RNU1-54P-201ENST00000517181 CLEC4MQ9H2X3 399 aaPredicted RBP5.27□□□□□ -1.57
RNU1-54P-201ENST00000517181 SUGCTQ9HAC7 445 aa5.27□□□□□ -1.57
RNU1-54P-201ENST00000517181 ABCB6Q9NP58 842 aa5.27□□□□□ -1.57
RNU1-54P-201ENST00000517181 NPHS2Q9NP85 383 aa5.27□□□□□ -1.57
RNU1-54P-201ENST00000517181 DCTN4Q9UJW0 460 aa5.27□□□□□ -1.57
RNU1-54P-201ENST00000517181 TREHO43280 583 aa5.26□□□□□ -1.57
RNU1-54P-201ENST00000517181 EIF4EBP3O60516 100 aaPredicted RBP5.26□□□□□ -1.57
RNU1-54P-201ENST00000517181 TIAF1O95411 115 aa5.26□□□□□ -1.57
RNU1-54P-201ENST00000517181 B3GALT4O96024 378 aa5.26□□□□□ -1.57
RNU1-54P-201ENST00000517181 FSTP19883 344 aa5.26□□□□□ -1.57
RNU1-54P-201ENST00000517181 ARL4DP49703 201 aa5.26□□□□□ -1.57
RNU1-54P-201ENST00000517181 PTPN12Q05209 780 aaKnown RBP5.26□□□□□ -1.57
RNU1-54P-201ENST00000517181 PCDH1Q08174 1060 aa5.26□□□□□ -1.57
RNU1-54P-201ENST00000517181 KCNA1Q09470 495 aa5.26□□□□□ -1.57
RNU1-54P-201ENST00000517181 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.26□□□□□ -1.57
RNU1-54P-201ENST00000517181 SMG8Q8ND04 991 aaKnown RBP5.26□□□□□ -1.57
RNU1-54P-201ENST00000517181 CSRNP1Q96S65 589 aa5.26□□□□□ -1.57
RNU1-54P-201ENST00000517181 ZNF576Q9H609 170 aa5.26□□□□□ -1.57
RNU1-54P-201ENST00000517181 RAXQ9Y2V3 346 aa5.26□□□□□ -1.57
RNU1-54P-201ENST00000517181 DHX15O43143 795 aaKnown RBP5.25□□□□□ -1.57
RNU1-54P-201ENST00000517181 PREPP48147 710 aa5.25□□□□□ -1.57
RNU1-54P-201ENST00000517181 ARTNQ5T4W7 220 aa5.25□□□□□ -1.57
RNU1-54P-201ENST00000517181 TRIM56Q9BRZ2 755 aaKnown RBP5.25□□□□□ -1.57
RNU1-54P-201ENST00000517181 RUSC1Q9BVN2 902 aa5.25□□□□□ -1.57
RNU1-54P-201ENST00000517181 RNF112Q9ULX5 631 aa5.25□□□□□ -1.57
RNU1-54P-201ENST00000517181 GRM2Q14416 872 aa5.24□□□□□ -1.57
RNU1-54P-201ENST00000517181 RPS26P11Q5JNZ5 115 aaPredicted RBP5.24□□□□□ -1.57
RNU1-54P-201ENST00000517181 FAM20CQ8IXL6 584 aa5.24□□□□□ -1.57
RNU1-54P-201ENST00000517181 UTP4Q969X6 686 aaKnown RBP5.24□□□□□ -1.57
RNU1-54P-201ENST00000517181 EHD4Q9H223 541 aa5.24□□□□□ -1.57
RNU1-54P-201ENST00000517181 HIF3AQ9Y2N7 669 aa5.24□□□□□ -1.57
RNU1-54P-201ENST00000517181 CTSBP07858 339 aa5.23□□□□□ -1.57
RNU1-54P-201ENST00000517181 GSTM4Q03013 218 aa5.23□□□□□ -1.57
RNU1-54P-201ENST00000517181 LRP8Q14114 963 aa5.23□□□□□ -1.57
RNU1-54P-201ENST00000517181 ENOX2Q16206 610 aaKnown RBP5.23□□□□□ -1.57
RNU1-54P-201ENST00000517181 EXOSC6Q5RKV6 272 aaKnown RBP5.23□□□□□ -1.57
RNU1-54P-201ENST00000517181 EPS8L3Q8TE67 593 aaKnown RBP5.23□□□□□ -1.57
RNU1-54P-201ENST00000517181 C7orf69Q9H7B7 122 aa5.23□□□□□ -1.57
RNU1-54P-201ENST00000517181 STOML1Q9UBI4 398 aa5.23□□□□□ -1.57
RNU1-54P-201ENST00000517181 IVNS1ABPQ9Y6Y0 642 aa5.23□□□□□ -1.57
RNU1-54P-201ENST00000517181 TMEM238LA0A1B0GVL6 79 aa5.22□□□□□ -1.57
RNU1-54P-201ENST00000517181 GSC2O15499 205 aa5.22□□□□□ -1.57
RNU1-54P-201ENST00000517181 IGLV1-40P01703 118 aa5.22□□□□□ -1.57
RNU1-54P-201ENST00000517181 FMR1Q06787 632 aaKnown RBP eCLIP5.22□□□□□ -1.57
RNU1-54P-201ENST00000517181 NUTM2GQ5VZR2 741 aa5.22□□□□□ -1.57
RNU1-54P-201ENST00000517181 CLEC10AQ8IUN9 316 aa5.22□□□□□ -1.57
RNU1-54P-201ENST00000517181 TMC1Q8TDI8 760 aa5.22□□□□□ -1.57
RNU1-54P-201ENST00000517181 FAM83CQ9BQN1 747 aa5.22□□□□□ -1.57
RNU1-54P-201ENST00000517181 USP26Q9BXU7 913 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms