RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 FOXD4L4Q8WXT5 416 aaPredicted RBP5.64□□□□□ -1.51
RNU6-1088P-201ENST00000516850 HHIPQ96QV1 700 aa5.64□□□□□ -1.51
RNU6-1088P-201ENST00000516850 KCNF1Q9H3M0 494 aa5.64□□□□□ -1.51
RNU6-1088P-201ENST00000516850 ZFYVE28Q9HCC9 887 aa5.64□□□□□ -1.51
RNU6-1088P-201ENST00000516850 SOX13Q9UN79 622 aa5.64□□□□□ -1.51
RNU6-1088P-201ENST00000516850 H3BRB1 525 aa5.63□□□□□ -1.51
RNU6-1088P-201ENST00000516850 NDUFB5O43674 189 aa5.63□□□□□ -1.51
RNU6-1088P-201ENST00000516850 GAS2O43903 313 aaKnown RBP5.63□□□□□ -1.51
RNU6-1088P-201ENST00000516850 ADAM11O75078 769 aa5.63□□□□□ -1.51
RNU6-1088P-201ENST00000516850 PDE3BQ13370 1112 aa5.63□□□□□ -1.51
RNU6-1088P-201ENST00000516850 NUTM2GQ5VZR2 741 aa5.63□□□□□ -1.51
RNU6-1088P-201ENST00000516850 TUT1Q9H6E5 874 aaKnown RBP5.63□□□□□ -1.51
RNU6-1088P-201ENST00000516850 PCMTD2Q9NV79 361 aa5.63□□□□□ -1.51
RNU6-1088P-201ENST00000516850 SOX1O00570 391 aaPredicted RBP5.62□□□□□ -1.51
RNU6-1088P-201ENST00000516850 ARMC10Q8N2F6 343 aa5.62□□□□□ -1.51
RNU6-1088P-201ENST00000516850 TMC1Q8TDI8 760 aa5.62□□□□□ -1.51
RNU6-1088P-201ENST00000516850 FAM46AQ96IP4 442 aaKnown RBP5.62□□□□□ -1.51
RNU6-1088P-201ENST00000516850 MYRFLQ96LU7 910 aa5.62□□□□□ -1.51
RNU6-1088P-201ENST00000516850 USP26Q9BXU7 913 aa5.62□□□□□ -1.51
RNU6-1088P-201ENST00000516850 CYP4F12Q9HCS2 524 aa5.62□□□□□ -1.51
RNU6-1088P-201ENST00000516850 SUPT5HO00267 1087 aaKnown RBP5.61□□□□□ -1.51
RNU6-1088P-201ENST00000516850 TM4SF5O14894 197 aa5.61□□□□□ -1.51
RNU6-1088P-201ENST00000516850 BMP3P12645 472 aa5.61□□□□□ -1.51
RNU6-1088P-201ENST00000516850 SERPINB4P48594 390 aa5.61□□□□□ -1.51
RNU6-1088P-201ENST00000516850 GSTM4Q03013 218 aa5.61□□□□□ -1.51
RNU6-1088P-201ENST00000516850 NFIAQ12857 509 aa5.61□□□□□ -1.51
RNU6-1088P-201ENST00000516850 CLEC10AQ8IUN9 316 aa5.61□□□□□ -1.51
RNU6-1088P-201ENST00000516850 C12orf50Q8NA57 414 aaPredicted RBP5.61□□□□□ -1.51
RNU6-1088P-201ENST00000516850 DDX54Q8TDD1 881 aaKnown RBP5.61□□□□□ -1.51
RNU6-1088P-201ENST00000516850 BHLHE41Q9C0J9 482 aaPredicted RBP5.61□□□□□ -1.51
RNU6-1088P-201ENST00000516850 SOX17Q9H6I2 414 aaPredicted RBP5.61□□□□□ -1.51
RNU6-1088P-201ENST00000516850 HIF3AQ9Y2N7 669 aa5.61□□□□□ -1.51
RNU6-1088P-201ENST00000516850 MEGF11A6BM72 1044 aa5.6□□□□□ -1.51
RNU6-1088P-201ENST00000516850 COBLO75128 1261 aa5.6□□□□□ -1.51
RNU6-1088P-201ENST00000516850 POLR3DP05423 398 aaPredicted RBP5.6□□□□□ -1.51
RNU6-1088P-201ENST00000516850 ESRRAP11474 423 aaPredicted RBP5.6□□□□□ -1.51
RNU6-1088P-201ENST00000516850 RXRBP28702 533 aa5.6□□□□□ -1.51
RNU6-1088P-201ENST00000516850 SSTR4P31391 388 aa5.6□□□□□ -1.51
RNU6-1088P-201ENST00000516850 GRIK1P39086 918 aa5.6□□□□□ -1.51
RNU6-1088P-201ENST00000516850 EXOSC6Q5RKV6 272 aaKnown RBP5.6□□□□□ -1.51
RNU6-1088P-201ENST00000516850 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.6□□□□□ -1.51
RNU6-1088P-201ENST00000516850 BEND4Q6ZU67 534 aa5.6□□□□□ -1.51
RNU6-1088P-201ENST00000516850 VN1R5Q7Z5H4 357 aa5.6□□□□□ -1.51
RNU6-1088P-201ENST00000516850 TRIM42Q8IWZ5 723 aa5.6□□□□□ -1.51
RNU6-1088P-201ENST00000516850 GALNT12Q8IXK2 581 aa5.6□□□□□ -1.51
RNU6-1088P-201ENST00000516850 FAM20CQ8IXL6 584 aa5.6□□□□□ -1.51
RNU6-1088P-201ENST00000516850 GIMAP7Q8NHV1 300 aa5.6□□□□□ -1.51
RNU6-1088P-201ENST00000516850 CCER1Q8TC90 406 aaPredicted RBP5.6□□□□□ -1.51
RNU6-1088P-201ENST00000516850 FAM83CQ9BQN1 747 aa5.6□□□□□ -1.51
RNU6-1088P-201ENST00000516850 C7orf69Q9H7B7 122 aa5.6□□□□□ -1.51
RNU6-1088P-201ENST00000516850 LIN7BQ9HAP6 207 aa5.6□□□□□ -1.51
RNU6-1088P-201ENST00000516850 ZFYVE1Q9HBF4 777 aa5.6□□□□□ -1.51
RNU6-1088P-201ENST00000516850 LATS2Q9NRM7 1088 aa5.6□□□□□ -1.51
RNU6-1088P-201ENST00000516850 A0A096LPE4 126 aa5.59□□□□□ -1.51
RNU6-1088P-201ENST00000516850 A0A1W2PPZ6 126 aa5.59□□□□□ -1.51
RNU6-1088P-201ENST00000516850 HMX2A2RU54 273 aa5.59□□□□□ -1.51
RNU6-1088P-201ENST00000516850 PREPP48147 710 aa5.59□□□□□ -1.51
RNU6-1088P-201ENST00000516850 HP1BP3Q5SSJ5 553 aaPredicted RBP5.59□□□□□ -1.51
RNU6-1088P-201ENST00000516850 PEAR1Q5VY43 1037 aaPredicted RBP5.59□□□□□ -1.51
RNU6-1088P-201ENST00000516850 HGSNATQ68CP4 663 aa5.59□□□□□ -1.51
RNU6-1088P-201ENST00000516850 RNF43Q68DV7 783 aa5.59□□□□□ -1.51
RNU6-1088P-201ENST00000516850 CITED4Q96RK1 184 aa5.59□□□□□ -1.51
RNU6-1088P-201ENST00000516850 DBNDD2Q9BQY9 259 aa5.59□□□□□ -1.51
RNU6-1088P-201ENST00000516850 A0A1W2PP55 124 aa5.58□□□□□ -1.52
RNU6-1088P-201ENST00000516850 CPNE3O75131 537 aaKnown RBP5.58□□□□□ -1.52
RNU6-1088P-201ENST00000516850 USP11P51784 963 aa5.58□□□□□ -1.52
RNU6-1088P-201ENST00000516850 INTS5Q6P9B9 1019 aaKnown RBP5.58□□□□□ -1.52
RNU6-1088P-201ENST00000516850 EHD4Q9H223 541 aa5.58□□□□□ -1.52
RNU6-1088P-201ENST00000516850 CLEC4MQ9H2X3 399 aaPredicted RBP5.58□□□□□ -1.52
RNU6-1088P-201ENST00000516850 LOC100289279A0A1B0GTE1 492 aa5.57□□□□□ -1.52
RNU6-1088P-201ENST00000516850 METTL12A8MUP2 240 aa5.57□□□□□ -1.52
RNU6-1088P-201ENST00000516850 TGFB1P01137 390 aa5.57□□□□□ -1.52
RNU6-1088P-201ENST00000516850 CYP11A1P05108 521 aa5.57□□□□□ -1.52
RNU6-1088P-201ENST00000516850 MAP4P27816 1152 aaKnown RBP5.57□□□□□ -1.52
RNU6-1088P-201ENST00000516850 PCDH1Q08174 1060 aa5.57□□□□□ -1.52
RNU6-1088P-201ENST00000516850 CCNJLQ8IV13 435 aa5.57□□□□□ -1.52
RNU6-1088P-201ENST00000516850 RETREG2Q8NC44 543 aa5.57□□□□□ -1.52
RNU6-1088P-201ENST00000516850 SMG8Q8ND04 991 aaKnown RBP5.57□□□□□ -1.52
RNU6-1088P-201ENST00000516850 YIPF2Q9BWQ6 316 aa5.57□□□□□ -1.52
RNU6-1088P-201ENST00000516850 TMPRSS13Q9BYE2 586 aa5.57□□□□□ -1.52
RNU6-1088P-201ENST00000516850 SUGCTQ9HAC7 445 aa5.57□□□□□ -1.52
RNU6-1088P-201ENST00000516850 ARHGAP4P98171 946 aa5.56□□□□□ -1.52
RNU6-1088P-201ENST00000516850 NFKBIBQ15653 356 aa5.56□□□□□ -1.52
RNU6-1088P-201ENST00000516850 KIAA0319Q5VV43 1072 aa5.56□□□□□ -1.52
RNU6-1088P-201ENST00000516850 TXNDC2Q86VQ3 553 aa5.56□□□□□ -1.52
RNU6-1088P-201ENST00000516850 DNAJC25Q9H1X3 360 aa5.56□□□□□ -1.52
RNU6-1088P-201ENST00000516850 RAD18Q9NS91 495 aa5.56□□□□□ -1.52
RNU6-1088P-201ENST00000516850 ATG3Q9NT62 314 aa5.56□□□□□ -1.52
RNU6-1088P-201ENST00000516850 GADD45BO75293 160 aaPredicted RBP5.55□□□□□ -1.52
RNU6-1088P-201ENST00000516850 GRIA4P48058 902 aa5.55□□□□□ -1.52
RNU6-1088P-201ENST00000516850 CD97P48960 835 aa5.55□□□□□ -1.52
RNU6-1088P-201ENST00000516850 ORC1Q13415 861 aa5.55□□□□□ -1.52
RNU6-1088P-201ENST00000516850 POU4F3Q15319 338 aa5.55□□□□□ -1.52
RNU6-1088P-201ENST00000516850 SPRED3Q2MJR0 410 aa5.55□□□□□ -1.52
RNU6-1088P-201ENST00000516850 SGO2Q562F6 1265 aa5.55□□□□□ -1.52
RNU6-1088P-201ENST00000516850 USPL1Q5W0Q7 1092 aa5.55□□□□□ -1.52
RNU6-1088P-201ENST00000516850 PAOXQ6QHF9 649 aa5.55□□□□□ -1.52
RNU6-1088P-201ENST00000516850 ZDHHC13Q8IUH4 622 aa5.55□□□□□ -1.52
RNU6-1088P-201ENST00000516850 SHKBP1Q8TBC3 707 aa5.55□□□□□ -1.52
RNU6-1088P-201ENST00000516850 DMRTB1Q96MA1 342 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms