RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 GPC2Q8N158 579 aa13.88□□□□□ -0.19
UBE2D3-232ENST00000514755 GGA1Q9UJY5 639 aa13.88□□□□□ -0.19
UBE2D3-232ENST00000514755 KIF16BQ96L93 1317 aa13.88□□□□□ -0.19
UBE2D3-232ENST00000514755 A0A1B0GUL6 1792 aa13.87□□□□□ -0.19
UBE2D3-232ENST00000514755 GRXCR2A6NFK2 248 aa13.87□□□□□ -0.19
UBE2D3-232ENST00000514755 SNAP23O00161 211 aa13.87□□□□□ -0.19
UBE2D3-232ENST00000514755 OSBPP22059 807 aa13.87□□□□□ -0.19
UBE2D3-232ENST00000514755 KLRK1P26718 216 aa13.87□□□□□ -0.19
UBE2D3-232ENST00000514755 CCT4P50991 539 aaKnown RBP13.87□□□□□ -0.19
UBE2D3-232ENST00000514755 SCNN1DP51172 638 aa13.87□□□□□ -0.19
UBE2D3-232ENST00000514755 RABL6Q3YEC7 729 aaPredicted RBP13.87□□□□□ -0.19
UBE2D3-232ENST00000514755 RBM46Q8TBY0 533 aaKnown RBP13.87□□□□□ -0.19
UBE2D3-232ENST00000514755 ARHGAP45Q92619 1136 aa13.87□□□□□ -0.19
UBE2D3-232ENST00000514755 MPHOSPH8Q99549 860 aa13.87□□□□□ -0.19
UBE2D3-232ENST00000514755 TAF1DQ9H5J8 278 aaPredicted RBP13.87□□□□□ -0.19
UBE2D3-232ENST00000514755 SCN4AP35499 1836 aa13.87□□□□□ -0.19
UBE2D3-232ENST00000514755 SCN9AQ15858 1988 aa13.87□□□□□ -0.19
UBE2D3-232ENST00000514755 ECE2O60344 883 aa13.86□□□□□ -0.19
UBE2D3-232ENST00000514755 TAF5LO75529 589 aa13.86□□□□□ -0.19
UBE2D3-232ENST00000514755 ATP2B4P23634 1241 aa13.86□□□□□ -0.19
UBE2D3-232ENST00000514755 CHRNDQ07001 517 aa13.86□□□□□ -0.19
UBE2D3-232ENST00000514755 CCDC57Q2TAC2 916 aa13.86□□□□□ -0.19
UBE2D3-232ENST00000514755 ATF7IPQ6VMQ6 1270 aa13.86□□□□□ -0.19
UBE2D3-232ENST00000514755 TXNRD3Q86VQ6 643 aa13.86□□□□□ -0.19
UBE2D3-232ENST00000514755 HELBQ8NG08 1087 aaPredicted RBP13.86□□□□□ -0.19
UBE2D3-232ENST00000514755 CLUAP1Q96AJ1 413 aa13.86□□□□□ -0.19
UBE2D3-232ENST00000514755 EYA3Q99504 573 aa13.86□□□□□ -0.19
UBE2D3-232ENST00000514755 MEIS3Q99687 375 aa13.86□□□□□ -0.19
UBE2D3-232ENST00000514755 PUS3Q9BZE2 481 aaKnown RBP13.86□□□□□ -0.19
UBE2D3-232ENST00000514755 ZC3H12CQ9C0D7 883 aaKnown RBP13.86□□□□□ -0.19
UBE2D3-232ENST00000514755 SHTN1A0MZ66 631 aa13.85□□□□□ -0.19
UBE2D3-232ENST00000514755 EPS15P42566 896 aa13.85□□□□□ -0.19
UBE2D3-232ENST00000514755 INTS3Q68E01 1043 aaKnown RBP13.85□□□□□ -0.19
UBE2D3-232ENST00000514755 CIAPIN1Q6FI81 312 aa13.85□□□□□ -0.19
UBE2D3-232ENST00000514755 KLHDC4Q8TBB5 520 aa13.85□□□□□ -0.19
UBE2D3-232ENST00000514755 HACL1Q9UJ83 578 aa13.85□□□□□ -0.19
UBE2D3-232ENST00000514755 IQCA1LA6NCM1 817 aa13.84□□□□□ -0.19
UBE2D3-232ENST00000514755 PSMD14O00487 310 aa13.84□□□□□ -0.19
UBE2D3-232ENST00000514755 EPHX2P34913 555 aa13.84□□□□□ -0.19
UBE2D3-232ENST00000514755 FOSBP53539 338 aa13.84□□□□□ -0.19
UBE2D3-232ENST00000514755 EPAS1Q99814 870 aa13.84□□□□□ -0.19
UBE2D3-232ENST00000514755 ZNF804BA4D1E1 1349 aa13.84□□□□□ -0.19
UBE2D3-232ENST00000514755 MED23Q9ULK4 1368 aa13.83□□□□□ -0.19
UBE2D3-232ENST00000514755 UBTFL1P0CB47 393 aaPredicted RBP13.83□□□□□ -0.2
UBE2D3-232ENST00000514755 RFX5P48382 616 aaPredicted RBP13.83□□□□□ -0.2
UBE2D3-232ENST00000514755 GMPSP49915 693 aaPredicted RBP13.83□□□□□ -0.2
UBE2D3-232ENST00000514755 LRRC24Q50LG9 513 aa13.83□□□□□ -0.2
UBE2D3-232ENST00000514755 EAPPQ56P03 285 aaPredicted RBP13.83□□□□□ -0.2
UBE2D3-232ENST00000514755 TAF7LQ5H9L4 462 aa13.83□□□□□ -0.2
UBE2D3-232ENST00000514755 ZKSCAN2Q63HK3 967 aa13.83□□□□□ -0.2
UBE2D3-232ENST00000514755 LDHAL6AQ6ZMR3 332 aa13.83□□□□□ -0.2
UBE2D3-232ENST00000514755 TMEM57Q8N5G2 664 aa13.83□□□□□ -0.2
UBE2D3-232ENST00000514755 ANKRD2Q9GZV1 360 aa13.83□□□□□ -0.2
UBE2D3-232ENST00000514755 LEMD3Q9Y2U8 911 aa13.83□□□□□ -0.2
UBE2D3-232ENST00000514755 PCDHGA10Q9Y5H3 936 aa13.83□□□□□ -0.2
UBE2D3-232ENST00000514755 LRRFIP2Q9Y608 721 aaKnown RBP13.83□□□□□ -0.2
UBE2D3-232ENST00000514755 IRS2Q9Y4H2 1338 aa13.83□□□□□ -0.2
UBE2D3-232ENST00000514755 ADAMTSL1Q8N6G6 1762 aa13.83□□□□□ -0.2
UBE2D3-232ENST00000514755 IPO8O15397 1037 aaKnown RBP13.82□□□□□ -0.2
UBE2D3-232ENST00000514755 PLIN1O60240 522 aa13.82□□□□□ -0.2
UBE2D3-232ENST00000514755 ST18O60284 1047 aa13.82□□□□□ -0.2
UBE2D3-232ENST00000514755 HSPA6P17066 643 aa13.82□□□□□ -0.2
UBE2D3-232ENST00000514755 RBM26Q5T8P6 1007 aaKnown RBP13.82□□□□□ -0.2
UBE2D3-232ENST00000514755 SMC1BQ8NDV3 1235 aa13.82□□□□□ -0.2
UBE2D3-232ENST00000514755 CNNM1Q9NRU3 951 aa13.82□□□□□ -0.2
UBE2D3-232ENST00000514755 GPRC5DQ9NZD1 345 aa13.82□□□□□ -0.2
UBE2D3-232ENST00000514755 LHX6Q9UPM6 363 aa13.82□□□□□ -0.2
UBE2D3-232ENST00000514755 RLBP1P12271 317 aa13.81□□□□□ -0.2
UBE2D3-232ENST00000514755 HTRA3P83110 453 aa13.81□□□□□ -0.2
UBE2D3-232ENST00000514755 FSTL1Q12841 308 aa13.81□□□□□ -0.2
UBE2D3-232ENST00000514755 RIPOR2Q9Y4F9 1068 aa13.81□□□□□ -0.2
UBE2D3-232ENST00000514755 ZNF646O15015 1829 aaPredicted RBP13.8□□□□□ -0.2
UBE2D3-232ENST00000514755 LMOD1P29536 600 aaPredicted RBP13.8□□□□□ -0.2
UBE2D3-232ENST00000514755 TNIP1Q15025 636 aa13.8□□□□□ -0.2
UBE2D3-232ENST00000514755 MXD3Q9BW11 206 aa13.8□□□□□ -0.2
UBE2D3-232ENST00000514755 PSME4Q14997 1843 aa13.8□□□□□ -0.2
UBE2D3-232ENST00000514755 EGFRP00533 1210 aa13.79□□□□□ -0.2
UBE2D3-232ENST00000514755 VIL1P09327 827 aaKnown RBP13.79□□□□□ -0.2
UBE2D3-232ENST00000514755 KCNJ4P48050 445 aa13.79□□□□□ -0.2
UBE2D3-232ENST00000514755 HIRAP54198 1017 aaPredicted RBP13.79□□□□□ -0.2
UBE2D3-232ENST00000514755 PTPN12Q05209 780 aaKnown RBP13.79□□□□□ -0.2
UBE2D3-232ENST00000514755 MAP1SQ66K74 1059 aaPredicted RBP13.79□□□□□ -0.2
UBE2D3-232ENST00000514755 TYW1BQ6NUM6 668 aa13.79□□□□□ -0.2
UBE2D3-232ENST00000514755 PODNQ7Z5L7 613 aa13.79□□□□□ -0.2
UBE2D3-232ENST00000514755 LDHDQ86WU2 507 aa13.79□□□□□ -0.2
UBE2D3-232ENST00000514755 TRPM4Q8TD43 1214 aa13.79□□□□□ -0.2
UBE2D3-232ENST00000514755 FBXW7Q969H0 707 aa13.79□□□□□ -0.2
UBE2D3-232ENST00000514755 CNOT7Q9UIV1 285 aaKnown RBP13.79□□□□□ -0.2
UBE2D3-232ENST00000514755 SAMD7Q7Z3H4 446 aa13.78□□□□□ -0.2
UBE2D3-232ENST00000514755 PNMA8AQ86V59 439 aaPredicted RBP13.78□□□□□ -0.2
UBE2D3-232ENST00000514755 VGLL2Q8N8G2 317 aa13.78□□□□□ -0.2
UBE2D3-232ENST00000514755 COA1Q9GZY4 146 aa13.78□□□□□ -0.2
UBE2D3-232ENST00000514755 ADARB2Q9NS39 739 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-232ENST00000514755 PA2G4Q9UQ80 394 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-232ENST00000514755 ITGBL1O95965 494 aaPredicted RBP13.77□□□□□ -0.21
UBE2D3-232ENST00000514755 FMR1Q06787 632 aaKnown RBP eCLIP13.77□□□□□ -0.21
UBE2D3-232ENST00000514755 TPRNQ4KMQ1 711 aa13.77□□□□□ -0.21
UBE2D3-232ENST00000514755 RSBN1LQ6PCB5 846 aaPredicted RBP13.77□□□□□ -0.21
UBE2D3-232ENST00000514755 C15orf52Q6ZUT6 534 aaKnown RBP13.77□□□□□ -0.21
UBE2D3-232ENST00000514755 DZIP1LQ8IYY4 767 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms