RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 NLRP8Q86W28 1048 aa10.04□□□□□ -0.8
RFC1-213ENST00000512275 CRELD1Q96HD1 420 aa10.04□□□□□ -0.8
RFC1-213ENST00000512275 ZFYVE28Q9HCC9 887 aa10.04□□□□□ -0.8
RFC1-213ENST00000512275 GPAMQ9HCL2 828 aa10.04□□□□□ -0.8
RFC1-213ENST00000512275 SPHKAPQ2M3C7 1700 aa10.04□□□□□ -0.8
RFC1-213ENST00000512275 AGLP35573 1532 aa10.03□□□□□ -0.8
RFC1-213ENST00000512275 CLTCQ00610 1675 aaKnown RBP10.03□□□□□ -0.8
RFC1-213ENST00000512275 SENP3-EIF4A1A0A087X0R7 540 aa10.03□□□□□ -0.8
RFC1-213ENST00000512275 NANOS1Q8WY41 292 aaKnown RBP10.03□□□□□ -0.8
RFC1-213ENST00000512275 CCDC74AQ96AQ1 378 aa10.03□□□□□ -0.8
RFC1-213ENST00000512275 CEP63Q96MT8 703 aa10.03□□□□□ -0.8
RFC1-213ENST00000512275 CHRDQ9H2X0 955 aa10.03□□□□□ -0.8
RFC1-213ENST00000512275 RUBCNLQ9H714 662 aa10.03□□□□□ -0.8
RFC1-213ENST00000512275 SPG7Q9UQ90 795 aa10.03□□□□□ -0.8
RFC1-213ENST00000512275 ABCC3O15438 1527 aa10.02□□□□□ -0.8
RFC1-213ENST00000512275 EFCAB6Q5THR3 1501 aa10.02□□□□□ -0.8
RFC1-213ENST00000512275 KANK1Q14678 1352 aa10.02□□□□□ -0.8
RFC1-213ENST00000512275 ERCC5P28715 1186 aaPredicted RBP10.02□□□□□ -0.81
RFC1-213ENST00000512275 KCNQ4P56696 695 aa10.02□□□□□ -0.81
RFC1-213ENST00000512275 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.02□□□□□ -0.81
RFC1-213ENST00000512275 CNTNAP3BQ96NU0 1288 aa10.02□□□□□ -0.81
RFC1-213ENST00000512275 CNTNAP3Q9BZ76 1288 aa10.02□□□□□ -0.81
RFC1-213ENST00000512275 CLSPNQ9HAW4 1339 aa10.02□□□□□ -0.81
RFC1-213ENST00000512275 PHACTR2O75167 634 aa10.01□□□□□ -0.81
RFC1-213ENST00000512275 XYLBO75191 536 aa10.01□□□□□ -0.81
RFC1-213ENST00000512275 THBS1P07996 1170 aa10.01□□□□□ -0.81
RFC1-213ENST00000512275 ITGA6P23229 1130 aa10.01□□□□□ -0.81
RFC1-213ENST00000512275 IRS1P35568 1242 aa10.01□□□□□ -0.81
RFC1-213ENST00000512275 C9orf131Q5VYM1 1079 aa10.01□□□□□ -0.81
RFC1-213ENST00000512275 GGT6Q6P531 493 aa10.01□□□□□ -0.81
RFC1-213ENST00000512275 PI16Q6UXB8 463 aa10.01□□□□□ -0.81
RFC1-213ENST00000512275 SIN3AQ96ST3 1273 aa10.01□□□□□ -0.81
RFC1-213ENST00000512275 COL25A1Q9BXS0 654 aaPredicted RBP10.01□□□□□ -0.81
RFC1-213ENST00000512275 BRD7Q9NPI1 651 aa10.01□□□□□ -0.81
RFC1-213ENST00000512275 ZEB1P37275 1124 aaPredicted RBP10□□□□□ -0.81
RFC1-213ENST00000512275 NEUROD1Q13562 356 aa10□□□□□ -0.81
RFC1-213ENST00000512275 LBRQ14739 615 aaKnown RBP10□□□□□ -0.81
RFC1-213ENST00000512275 NT5DC4Q86YG4 428 aa10□□□□□ -0.81
RFC1-213ENST00000512275 EPS8L3Q8TE67 593 aaKnown RBP10□□□□□ -0.81
RFC1-213ENST00000512275 OSBPL7Q9BZF2 842 aa10□□□□□ -0.81
RFC1-213ENST00000512275 ZCCHC2Q9C0B9 1178 aaKnown RBP10□□□□□ -0.81
RFC1-213ENST00000512275 C12orf49Q9H741 205 aa10□□□□□ -0.81
RFC1-213ENST00000512275 USP35Q9P2H5 1018 aa10□□□□□ -0.81
RFC1-213ENST00000512275 GJA3Q9Y6H8 435 aa10□□□□□ -0.81
RFC1-213ENST00000512275 LMTK2Q8IWU2 1503 aa10□□□□□ -0.81
RFC1-213ENST00000512275 FER1L4A9Z1Z3 1794 aa9.99□□□□□ -0.81
RFC1-213ENST00000512275 GIPC1O14908 333 aa9.99□□□□□ -0.81
RFC1-213ENST00000512275 EFSO43281 561 aa9.99□□□□□ -0.81
RFC1-213ENST00000512275 FAM157BP0CG42 384 aa9.99□□□□□ -0.81
RFC1-213ENST00000512275 EIF4BP23588 611 aaKnown RBP9.99□□□□□ -0.81
RFC1-213ENST00000512275 ZNF76P36508 570 aa9.99□□□□□ -0.81
RFC1-213ENST00000512275 MLECQ14165 292 aa9.99□□□□□ -0.81
RFC1-213ENST00000512275 NLRP13Q86W25 1043 aa9.99□□□□□ -0.81
RFC1-213ENST00000512275 PGBD3Q8N328 593 aa9.99□□□□□ -0.81
RFC1-213ENST00000512275 RNF34Q969K3 372 aa9.99□□□□□ -0.81
RFC1-213ENST00000512275 CNTN3Q9P232 1028 aa9.99□□□□□ -0.81
RFC1-213ENST00000512275 ANKRD30BQ9BXX2 1392 aa9.99□□□□□ -0.81
RFC1-213ENST00000512275 UBAP2LQ14157 1087 aaKnown RBP9.98□□□□□ -0.81
RFC1-213ENST00000512275 NAALADL2Q58DX5 795 aa9.98□□□□□ -0.81
RFC1-213ENST00000512275 RNFT1Q5M7Z0 435 aa9.98□□□□□ -0.81
RFC1-213ENST00000512275 GALNT12Q8IXK2 581 aa9.98□□□□□ -0.81
RFC1-213ENST00000512275 VWA5B2Q8N398 1253 aa9.98□□□□□ -0.81
RFC1-213ENST00000512275 ABI2Q9NYB9 513 aaPredicted RBP9.98□□□□□ -0.81
RFC1-213ENST00000512275 CLTCL1P53675 1640 aa9.97□□□□□ -0.81
RFC1-213ENST00000512275 PREX1Q8TCU6 1659 aa9.97□□□□□ -0.81
RFC1-213ENST00000512275 CDC14CA4D256 554 aa9.97□□□□□ -0.81
RFC1-213ENST00000512275 EREGO14944 169 aa9.97□□□□□ -0.81
RFC1-213ENST00000512275 C1orf127Q8N9H9 656 aa9.97□□□□□ -0.81
RFC1-213ENST00000512275 SREK1Q8WXA9 508 aaKnown RBP9.97□□□□□ -0.81
RFC1-213ENST00000512275 GAS2L1Q99501 681 aaPredicted RBP9.97□□□□□ -0.81
RFC1-213ENST00000512275 NPHS2Q9NP85 383 aa9.97□□□□□ -0.81
RFC1-213ENST00000512275 ARID4BQ4LE39 1312 aaPredicted RBP9.97□□□□□ -0.81
RFC1-213ENST00000512275 TRPM2O94759 1503 aa9.97□□□□□ -0.81
RFC1-213ENST00000512275 EFHC2Q5JST6 749 aa9.96□□□□□ -0.82
RFC1-213ENST00000512275 TGIF2Q9GZN2 237 aa9.96□□□□□ -0.82
RFC1-213ENST00000512275 NLRP2Q9NX02 1062 aa9.96□□□□□ -0.82
RFC1-213ENST00000512275 WASHC2CQ9Y4E1 1318 aa9.96□□□□□ -0.82
RFC1-213ENST00000512275 PLA2R1Q13018 1463 aa9.96□□□□□ -0.82
RFC1-213ENST00000512275 UGGT1Q9NYU2 1555 aa9.96□□□□□ -0.82
RFC1-213ENST00000512275 KIF1BO60333 1816 aa9.96□□□□□ -0.82
RFC1-213ENST00000512275 POLR3DP05423 398 aaPredicted RBP9.95□□□□□ -0.82
RFC1-213ENST00000512275 SV2AQ7L0J3 742 aa9.95□□□□□ -0.82
RFC1-213ENST00000512275 SRCIN1Q9C0H9 1055 aa9.95□□□□□ -0.82
RFC1-213ENST00000512275 KCNH4Q9UQ05 1017 aa9.95□□□□□ -0.82
RFC1-213ENST00000512275 RPRD2Q5VT52 1461 aaKnown RBP9.95□□□□□ -0.82
RFC1-213ENST00000512275 MROH2AA6NES4 1674 aa9.95□□□□□ -0.82
RFC1-213ENST00000512275 RIMS1Q86UR5 1692 aaKnown RBP9.94□□□□□ -0.82
RFC1-213ENST00000512275 NPATQ14207 1427 aa9.94□□□□□ -0.82
RFC1-213ENST00000512275 TONSLQ96HA7 1378 aa9.94□□□□□ -0.82
RFC1-213ENST00000512275 FIGNL1Q6PIW4 674 aa9.94□□□□□ -0.82
RFC1-213ENST00000512275 PMEPA1Q969W9 287 aa9.94□□□□□ -0.82
RFC1-213ENST00000512275 FAM8A1Q9UBU6 413 aa9.94□□□□□ -0.82
RFC1-213ENST00000512275 HCN2Q9UL51 889 aa9.94□□□□□ -0.82
RFC1-213ENST00000512275 MADDQ8WXG6 1647 aa9.93□□□□□ -0.82
RFC1-213ENST00000512275 SYNMO15061 1565 aa9.93□□□□□ -0.82
RFC1-213ENST00000512275 CCDC144AA2RUR9 1427 aa9.93□□□□□ -0.82
RFC1-213ENST00000512275 USP31Q70CQ4 1352 aa9.93□□□□□ -0.82
RFC1-213ENST00000512275 ATXN7O15265 892 aaPredicted RBP9.93□□□□□ -0.82
RFC1-213ENST00000512275 PTPN12Q05209 780 aaKnown RBP9.93□□□□□ -0.82
RFC1-213ENST00000512275 SFSWAPQ12872 951 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms