RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 PRAMEF18Q5VWM3 479 aa15.91■□□□□ 0.14
KDM3B-206ENST00000509468 SUCLG2Q96I99 432 aa15.91■□□□□ 0.14
KDM3B-206ENST00000509468 ZBED3Q96IU2 234 aaPredicted RBP15.91■□□□□ 0.14
KDM3B-206ENST00000509468 RNF186Q9NXI6 227 aa15.91■□□□□ 0.14
KDM3B-206ENST00000509468 SCAF8Q9UPN6 1271 aaKnown RBP15.91■□□□□ 0.14
KDM3B-206ENST00000509468 MROH5Q6ZUA9 1318 aa15.91■□□□□ 0.14
KDM3B-206ENST00000509468 HIBADHP31937 336 aaKnown RBP15.9■□□□□ 0.14
KDM3B-206ENST00000509468 ALDH1L2Q3SY69 923 aa15.9■□□□□ 0.14
KDM3B-206ENST00000509468 ARMC9Q7Z3E5 817 aa15.9■□□□□ 0.14
KDM3B-206ENST00000509468 RASAL3Q86YV0 1011 aa15.9■□□□□ 0.14
KDM3B-206ENST00000509468 SSH1Q8WYL5 1049 aa15.9■□□□□ 0.14
KDM3B-206ENST00000509468 KAZALD1Q96I82 304 aa15.9■□□□□ 0.14
KDM3B-206ENST00000509468 RIPOR2Q9Y4F9 1068 aa15.9■□□□□ 0.14
KDM3B-206ENST00000509468 TRPA1O75762 1119 aa15.89■□□□□ 0.13
KDM3B-206ENST00000509468 RABL6Q3YEC7 729 aaPredicted RBP15.89■□□□□ 0.13
KDM3B-206ENST00000509468 CERS5Q8N5B7 392 aa15.89■□□□□ 0.13
KDM3B-206ENST00000509468 BICC1Q9H694 974 aaKnown RBP15.89■□□□□ 0.13
KDM3B-206ENST00000509468 MOB2Q70IA6 237 aa15.88■□□□□ 0.13
KDM3B-206ENST00000509468 TDRD7Q8NHU6 1098 aaKnown RBP15.88■□□□□ 0.13
KDM3B-206ENST00000509468 FAM84BQ96KN1 310 aaPredicted RBP15.88■□□□□ 0.13
KDM3B-206ENST00000509468 PUS3Q9BZE2 481 aaKnown RBP15.88■□□□□ 0.13
KDM3B-206ENST00000509468 DEFB129Q9H1M3 183 aa15.88■□□□□ 0.13
KDM3B-206ENST00000509468 PPP2R3BQ9Y5P8 575 aa15.88■□□□□ 0.13
KDM3B-206ENST00000509468 FAM205AQ6ZU69 1335 aa15.88■□□□□ 0.13
KDM3B-206ENST00000509468 ECM29Q5VYK3 1845 aa15.87■□□□□ 0.13
KDM3B-206ENST00000509468 CCDC85CA6NKD9 419 aa15.87■□□□□ 0.13
KDM3B-206ENST00000509468 F8W031 263 aaPredicted RBP15.87■□□□□ 0.13
KDM3B-206ENST00000509468 CT47B1P0C2W7 299 aaPredicted RBP15.87■□□□□ 0.13
KDM3B-206ENST00000509468 RBM5P52756 815 aaKnown RBP eCLIP15.87■□□□□ 0.13
KDM3B-206ENST00000509468 SUPT20HL1Q3ZLR7 823 aa15.87■□□□□ 0.13
KDM3B-206ENST00000509468 CFAP100Q494V2 611 aa15.87■□□□□ 0.13
KDM3B-206ENST00000509468 VPS37DQ86XT2 251 aa15.87■□□□□ 0.13
KDM3B-206ENST00000509468 TRMT2AQ8IZ69 625 aaKnown RBP15.87■□□□□ 0.13
KDM3B-206ENST00000509468 PRMT6Q96LA8 375 aaPredicted RBP15.87■□□□□ 0.13
KDM3B-206ENST00000509468 USP44Q9H0E7 712 aa15.87■□□□□ 0.13
KDM3B-206ENST00000509468 COL1A1P02452 1464 aaPredicted RBP15.86■□□□□ 0.13
KDM3B-206ENST00000509468 PPP1R12BO60237 982 aaPredicted RBP15.86■□□□□ 0.13
KDM3B-206ENST00000509468 GYG1P46976 350 aa15.86■□□□□ 0.13
KDM3B-206ENST00000509468 TM4SF4P48230 202 aa15.86■□□□□ 0.13
KDM3B-206ENST00000509468 DGKZQ13574 1117 aa15.86■□□□□ 0.13
KDM3B-206ENST00000509468 CAVIN4Q5BKX8 364 aa15.86■□□□□ 0.13
KDM3B-206ENST00000509468 CDCA7LQ96GN5 454 aa15.86■□□□□ 0.13
KDM3B-206ENST00000509468 MCOLN1Q9GZU1 580 aa15.86■□□□□ 0.13
KDM3B-206ENST00000509468 SPDYE2BA6NHP3 402 aa15.85■□□□□ 0.13
KDM3B-206ENST00000509468 UNCXA6NJT0 531 aa15.85■□□□□ 0.13
KDM3B-206ENST00000509468 CCER2I3L3R5 266 aa15.85■□□□□ 0.13
KDM3B-206ENST00000509468 PDE8BO95263 885 aa15.85■□□□□ 0.13
KDM3B-206ENST00000509468 SPDYE6P0CI01 402 aa15.85■□□□□ 0.13
KDM3B-206ENST00000509468 PTPN12Q05209 780 aaKnown RBP15.85■□□□□ 0.13
KDM3B-206ENST00000509468 METTL24Q5JXM2 366 aa15.85■□□□□ 0.13
KDM3B-206ENST00000509468 MFSD14BQ5SR56 506 aa15.85■□□□□ 0.13
KDM3B-206ENST00000509468 LDLRAD1Q5T700 205 aa15.85■□□□□ 0.13
KDM3B-206ENST00000509468 FBXO33Q7Z6M2 555 aa15.85■□□□□ 0.13
KDM3B-206ENST00000509468 ANKRD44Q8N8A2 993 aa15.85■□□□□ 0.13
KDM3B-206ENST00000509468 SMC4Q9NTJ3 1288 aa15.85■□□□□ 0.13
KDM3B-206ENST00000509468 SERPINA10Q9UK55 444 aa15.85■□□□□ 0.13
KDM3B-206ENST00000509468 ANGEL1Q9UNK9 670 aaKnown RBP15.85■□□□□ 0.13
KDM3B-206ENST00000509468 HDAC5Q9UQL6 1122 aa15.85■□□□□ 0.13
KDM3B-206ENST00000509468 FRAT2O75474 233 aaPredicted RBP15.84■□□□□ 0.13
KDM3B-206ENST00000509468 PRKG1Q13976 671 aa15.84■□□□□ 0.13
KDM3B-206ENST00000509468 SLC10A4Q96EP9 437 aa15.84■□□□□ 0.13
KDM3B-206ENST00000509468 TTF2Q9UNY4 1162 aaKnown RBP15.84■□□□□ 0.13
KDM3B-206ENST00000509468 JAG2Q9Y219 1238 aa15.84■□□□□ 0.13
KDM3B-206ENST00000509468 INHBEP58166 350 aa15.83■□□□□ 0.12
KDM3B-206ENST00000509468 SREBF2Q12772 1141 aa15.83■□□□□ 0.12
KDM3B-206ENST00000509468 LRRC24Q50LG9 513 aa15.83■□□□□ 0.12
KDM3B-206ENST00000509468 TBC1D22AQ8WUA7 517 aa15.83■□□□□ 0.12
KDM3B-206ENST00000509468 VEZTQ9HBM0 779 aa15.83■□□□□ 0.12
KDM3B-206ENST00000509468 CLRN2A0PK11 232 aa15.82■□□□□ 0.12
KDM3B-206ENST00000509468 TNFAIP1Q13829 316 aa15.82■□□□□ 0.12
KDM3B-206ENST00000509468 MAP3K11Q16584 847 aa15.82■□□□□ 0.12
KDM3B-206ENST00000509468 PCDHAC2Q9Y5I4 1007 aa15.82■□□□□ 0.12
KDM3B-206ENST00000509468 IFIT1P09914 478 aaKnown RBP15.81■□□□□ 0.12
KDM3B-206ENST00000509468 HDLBPQ00341 1268 aaKnown RBP15.81■□□□□ 0.12
KDM3B-206ENST00000509468 RASA3Q14644 834 aa15.81■□□□□ 0.12
KDM3B-206ENST00000509468 SPRYD7Q5W111 196 aa15.81■□□□□ 0.12
KDM3B-206ENST00000509468 MRIQ9BWK5 157 aa15.81■□□□□ 0.12
KDM3B-206ENST00000509468 API5Q9BZZ5 524 aaKnown RBP15.81■□□□□ 0.12
KDM3B-206ENST00000509468 ALDH1A1P00352 501 aa15.8■□□□□ 0.12
KDM3B-206ENST00000509468 IREB2P48200 963 aaKnown RBP15.8■□□□□ 0.12
KDM3B-206ENST00000509468 TNNI2P48788 182 aa15.8■□□□□ 0.12
KDM3B-206ENST00000509468 RGS19P49795 217 aa15.8■□□□□ 0.12
KDM3B-206ENST00000509468 PUM3Q15397 648 aaKnown RBP15.8■□□□□ 0.12
KDM3B-206ENST00000509468 SPDYE2Q495Y8 402 aa15.8■□□□□ 0.12
KDM3B-206ENST00000509468 DZIP1LQ8IYY4 767 aaKnown RBP15.8■□□□□ 0.12
KDM3B-206ENST00000509468 VGLL2Q8N8G2 317 aa15.8■□□□□ 0.12
KDM3B-206ENST00000509468 ZNF70Q9UC06 446 aaPredicted RBP15.8■□□□□ 0.12
KDM3B-206ENST00000509468 NOB1Q9ULX3 412 aaKnown RBP15.8■□□□□ 0.12
KDM3B-206ENST00000509468 KIF16BQ96L93 1317 aa15.79■□□□□ 0.12
KDM3B-206ENST00000509468 MANSC4A6NHS7 340 aaPredicted RBP15.79■□□□□ 0.12
KDM3B-206ENST00000509468 EYA2O00167 538 aa15.79■□□□□ 0.12
KDM3B-206ENST00000509468 TBC1D8O95759 1140 aa15.79■□□□□ 0.12
KDM3B-206ENST00000509468 UBTFL1P0CB47 393 aaPredicted RBP15.79■□□□□ 0.12
KDM3B-206ENST00000509468 ZBTB48P10074 688 aaPredicted RBP15.79■□□□□ 0.12
KDM3B-206ENST00000509468 CRKP46108 304 aa15.79■□□□□ 0.12
KDM3B-206ENST00000509468 MKRN3Q13064 507 aaKnown RBP15.79■□□□□ 0.12
KDM3B-206ENST00000509468 NOM1Q5C9Z4 860 aaKnown RBP15.79■□□□□ 0.12
KDM3B-206ENST00000509468 NBPF12Q5TAG4 269 aaPredicted RBP15.79■□□□□ 0.12
KDM3B-206ENST00000509468 CTU1Q7Z7A3 348 aaKnown RBP15.79■□□□□ 0.12
KDM3B-206ENST00000509468 KLHDC4Q8TBB5 520 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms