RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 ITGB4P16144 1822 aa12.81□□□□□ -0.36
LIN54-207ENST00000508171 ZFYP08048 801 aaPredicted RBP12.81□□□□□ -0.36
LIN54-207ENST00000508171 SNW1Q13573 536 aaKnown RBP12.81□□□□□ -0.36
LIN54-207ENST00000508171 NKX2-3Q8TAU0 364 aa12.81□□□□□ -0.36
LIN54-207ENST00000508171 KIAA1524Q8TCG1 905 aa12.81□□□□□ -0.36
LIN54-207ENST00000508171 APPBP2Q92624 585 aa12.81□□□□□ -0.36
LIN54-207ENST00000508171 GJB4Q9NTQ9 266 aa12.81□□□□□ -0.36
LIN54-207ENST00000508171 BTG4Q9NY30 223 aa12.81□□□□□ -0.36
LIN54-207ENST00000508171 NRBP1Q9UHY1 535 aa12.81□□□□□ -0.36
LIN54-207ENST00000508171 MYH7P12883 1935 aa12.81□□□□□ -0.36
LIN54-207ENST00000508171 GPAA1O43292 621 aa12.81□□□□□ -0.36
LIN54-207ENST00000508171 PRC1O43663 620 aa12.81□□□□□ -0.36
LIN54-207ENST00000508171 PTGS1P23219 599 aa12.81□□□□□ -0.36
LIN54-207ENST00000508171 EVCP57679 992 aa12.81□□□□□ -0.36
LIN54-207ENST00000508171 ANTXR2P58335 489 aa12.81□□□□□ -0.36
LIN54-207ENST00000508171 VSIG10Q8N0Z9 540 aa12.81□□□□□ -0.36
LIN54-207ENST00000508171 KIF3AQ9Y496 699 aa12.81□□□□□ -0.36
LIN54-207ENST00000508171 LRRFIP1Q32MZ4 808 aaKnown RBP12.8□□□□□ -0.36
LIN54-207ENST00000508171 RIC1Q4ADV7 1423 aa12.8□□□□□ -0.36
LIN54-207ENST00000508171 MB21D2Q8IYB1 491 aaPredicted RBP12.8□□□□□ -0.36
LIN54-207ENST00000508171 ERCC4Q92889 916 aaPredicted RBP12.8□□□□□ -0.36
LIN54-207ENST00000508171 TRIM5Q9C035 493 aa12.8□□□□□ -0.36
LIN54-207ENST00000508171 SPTLC3Q9NUV7 552 aa12.8□□□□□ -0.36
LIN54-207ENST00000508171 HPS5Q9UPZ3 1129 aa12.8□□□□□ -0.36
LIN54-207ENST00000508171 KLF18A0A0U1RQI7 1052 aa12.8□□□□□ -0.36
LIN54-207ENST00000508171 ME1P48163 572 aa12.8□□□□□ -0.36
LIN54-207ENST00000508171 FBXL16Q8N461 479 aa12.8□□□□□ -0.36
LIN54-207ENST00000508171 CNNM1Q9NRU3 951 aa12.8□□□□□ -0.36
LIN54-207ENST00000508171 IRS4O14654 1257 aaPredicted RBP12.79□□□□□ -0.36
LIN54-207ENST00000508171 ZNF213O14771 459 aa12.79□□□□□ -0.36
LIN54-207ENST00000508171 POLR3DP05423 398 aaPredicted RBP12.79□□□□□ -0.36
LIN54-207ENST00000508171 CYP19A1P11511 503 aaPredicted RBP12.79□□□□□ -0.36
LIN54-207ENST00000508171 SLC9C2Q5TAH2 1124 aa12.79□□□□□ -0.36
LIN54-207ENST00000508171 C11orf57Q6ZUT1 292 aaPredicted RBP12.79□□□□□ -0.36
LIN54-207ENST00000508171 CCDC186Q7Z3E2 898 aa12.79□□□□□ -0.36
LIN54-207ENST00000508171 SYTL4Q96C24 671 aaPredicted RBP12.79□□□□□ -0.36
LIN54-207ENST00000508171 TRMT112Q9UI30 125 aaKnown RBP12.79□□□□□ -0.36
LIN54-207ENST00000508171 TBC1D2BQ9UPU7 963 aa12.79□□□□□ -0.36
LIN54-207ENST00000508171 CTSWP56202 376 aa12.79□□□□□ -0.36
LIN54-207ENST00000508171 DRC7Q8IY82 874 aa12.79□□□□□ -0.36
LIN54-207ENST00000508171 ENGASEQ8NFI3 743 aa12.79□□□□□ -0.36
LIN54-207ENST00000508171 TDRD7Q8NHU6 1098 aaKnown RBP12.79□□□□□ -0.36
LIN54-207ENST00000508171 NCOA7Q8NI08 942 aa12.79□□□□□ -0.36
LIN54-207ENST00000508171 ZNF396Q96N95 335 aaPredicted RBP12.79□□□□□ -0.36
LIN54-207ENST00000508171 NBPF3Q9H094 633 aa12.79□□□□□ -0.36
LIN54-207ENST00000508171 ZBTB1Q9Y2K1 713 aa12.79□□□□□ -0.36
LIN54-207ENST00000508171 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.78□□□□□ -0.36
LIN54-207ENST00000508171 GOLGA6L6A8MZA4 724 aa12.78□□□□□ -0.36
LIN54-207ENST00000508171 ZNF75DP51815 510 aa12.78□□□□□ -0.36
LIN54-207ENST00000508171 LRMPQ12912 555 aa12.78□□□□□ -0.36
LIN54-207ENST00000508171 PLA2G4DQ86XP0 818 aa12.78□□□□□ -0.36
LIN54-207ENST00000508171 HELBQ8NG08 1087 aaPredicted RBP12.78□□□□□ -0.36
LIN54-207ENST00000508171 TSC1Q92574 1164 aa12.78□□□□□ -0.36
LIN54-207ENST00000508171 PCDHA7Q9UN72 937 aa12.78□□□□□ -0.36
LIN54-207ENST00000508171 CDHR2Q9BYE9 1310 aa12.78□□□□□ -0.36
LIN54-207ENST00000508171 MYH3P11055 1940 aa12.78□□□□□ -0.36
LIN54-207ENST00000508171 ANKRD18BA2A2Z9 1011 aa12.78□□□□□ -0.36
LIN54-207ENST00000508171 GOLGA8BA8MQT2 603 aa12.78□□□□□ -0.36
LIN54-207ENST00000508171 IDH1O75874 414 aaKnown RBP12.78□□□□□ -0.36
LIN54-207ENST00000508171 IQCB1Q15051 598 aa12.78□□□□□ -0.36
LIN54-207ENST00000508171 VGLL2Q8N8G2 317 aa12.78□□□□□ -0.36
LIN54-207ENST00000508171 PIH1D3Q9NQM4 214 aaKnown RBP12.78□□□□□ -0.36
LIN54-207ENST00000508171 CLIC4Q9Y696 253 aa12.78□□□□□ -0.36
LIN54-207ENST00000508171 STRCQ7RTU9 1775 aa12.78□□□□□ -0.36
LIN54-207ENST00000508171 NUP98P52948 1817 aa12.78□□□□□ -0.36
LIN54-207ENST00000508171 DYNC1I1O14576 645 aa12.77□□□□□ -0.36
LIN54-207ENST00000508171 ADD2P35612 726 aa12.77□□□□□ -0.36
LIN54-207ENST00000508171 PHKA1P46020 1223 aa12.77□□□□□ -0.36
LIN54-207ENST00000508171 CCDC73Q6ZRK6 1079 aa12.77□□□□□ -0.36
LIN54-207ENST00000508171 RALYLQ86SE5 291 aaKnown RBP12.77□□□□□ -0.36
LIN54-207ENST00000508171 FSIP1Q8NA03 581 aa12.77□□□□□ -0.36
LIN54-207ENST00000508171 C8orf76Q96K31 380 aa12.77□□□□□ -0.36
LIN54-207ENST00000508171 PDCL3Q9H2J4 239 aa12.77□□□□□ -0.36
LIN54-207ENST00000508171 ORC3Q9UBD5 711 aaPredicted RBP12.77□□□□□ -0.36
LIN54-207ENST00000508171 A0A1B0GVL5 298 aa12.77□□□□□ -0.37
LIN54-207ENST00000508171 SNAP23O00161 211 aa12.77□□□□□ -0.37
LIN54-207ENST00000508171 PDE8BO95263 885 aa12.77□□□□□ -0.37
LIN54-207ENST00000508171 TPM3P06753 285 aa12.77□□□□□ -0.37
LIN54-207ENST00000508171 FAM160A1Q05DH4 1040 aa12.77□□□□□ -0.37
LIN54-207ENST00000508171 FBXO18Q8NFZ0 1043 aa12.77□□□□□ -0.37
LIN54-207ENST00000508171 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.77□□□□□ -0.37
LIN54-207ENST00000508171 TAOK2Q9UL54 1235 aa12.77□□□□□ -0.37
LIN54-207ENST00000508171 KINO60870 393 aaKnown RBP12.76□□□□□ -0.37
LIN54-207ENST00000508171 APPP05067 770 aa12.76□□□□□ -0.37
LIN54-207ENST00000508171 RXRAP19793 462 aa12.76□□□□□ -0.37
LIN54-207ENST00000508171 ATL3Q6DD88 541 aa12.76□□□□□ -0.37
LIN54-207ENST00000508171 MYRIPQ8NFW9 859 aa12.76□□□□□ -0.37
LIN54-207ENST00000508171 FBXW7Q969H0 707 aa12.76□□□□□ -0.37
LIN54-207ENST00000508171 INCENPQ9NQS7 918 aa12.76□□□□□ -0.37
LIN54-207ENST00000508171 CCDC102BQ68D86 513 aa12.76□□□□□ -0.37
LIN54-207ENST00000508171 CYB5R4Q7L1T6 521 aa12.76□□□□□ -0.37
LIN54-207ENST00000508171 TBC1D10CQ8IV04 446 aa12.76□□□□□ -0.37
LIN54-207ENST00000508171 SENP2Q9HC62 589 aa12.76□□□□□ -0.37
LIN54-207ENST00000508171 RTEL1Q9NZ71 1219 aa12.76□□□□□ -0.37
LIN54-207ENST00000508171 UBN2Q6ZU65 1347 aa12.76□□□□□ -0.37
LIN54-207ENST00000508171 ZNF532Q9HCE3 1301 aa12.76□□□□□ -0.37
LIN54-207ENST00000508171 FAM177BA6PVY3 158 aa12.75□□□□□ -0.37
LIN54-207ENST00000508171 KIF28PB7ZC32 967 aa12.75□□□□□ -0.37
LIN54-207ENST00000508171 CPLX1O14810 134 aa12.75□□□□□ -0.37
LIN54-207ENST00000508171 CTAGE5O15320 804 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms