RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 LINS1Q8NG48 757 aa22.94■■□□□ 1.26
CLDND1-217ENST00000508071 TAF5LO75529 589 aa22.93■■□□□ 1.26
CLDND1-217ENST00000508071 CCDC27Q2M243 656 aa22.93■■□□□ 1.26
CLDND1-217ENST00000508071 SUPT20HL1Q3ZLR7 823 aa22.93■■□□□ 1.26
CLDND1-217ENST00000508071 CERS5Q8N5B7 392 aa22.93■■□□□ 1.26
CLDND1-217ENST00000508071 WNK4Q96J92 1243 aa22.93■■□□□ 1.26
CLDND1-217ENST00000508071 CLMNQ96JQ2 1002 aa22.93■■□□□ 1.26
CLDND1-217ENST00000508071 TRIM17Q9Y577 477 aa22.93■■□□□ 1.26
CLDND1-217ENST00000508071 F8W031 263 aaPredicted RBP22.92■■□□□ 1.26
CLDND1-217ENST00000508071 C15orf52Q6ZUT6 534 aaKnown RBP22.92■■□□□ 1.26
CLDND1-217ENST00000508071 ZNF804AQ7Z570 1209 aa22.92■■□□□ 1.26
CLDND1-217ENST00000508071 WWC1Q8IX03 1113 aa22.92■■□□□ 1.26
CLDND1-217ENST00000508071 HELBQ8NG08 1087 aaPredicted RBP22.92■■□□□ 1.26
CLDND1-217ENST00000508071 A0A1B0GUL6 1792 aa22.91■■□□□ 1.26
CLDND1-217ENST00000508071 CLRN2A0PK11 232 aa22.91■■□□□ 1.26
CLDND1-217ENST00000508071 UNCXA6NJT0 531 aa22.91■■□□□ 1.26
CLDND1-217ENST00000508071 SNAP23O00161 211 aa22.91■■□□□ 1.26
CLDND1-217ENST00000508071 IFIT5Q13325 482 aaKnown RBP22.91■■□□□ 1.26
CLDND1-217ENST00000508071 CFAP100Q494V2 611 aa22.91■■□□□ 1.26
CLDND1-217ENST00000508071 VEZTQ9HBM0 779 aa22.91■■□□□ 1.26
CLDND1-217ENST00000508071 CHMP3Q9Y3E7 222 aa22.91■■□□□ 1.26
CLDND1-217ENST00000508071 SSC5DA1L4H1 1573 aa22.91■■□□□ 1.26
CLDND1-217ENST00000508071 LAMB1P07942 1786 aa22.91■■□□□ 1.26
CLDND1-217ENST00000508071 HTTP42858 3142 aa22.91■■□□□ 1.26
CLDND1-217ENST00000508071 IRS2Q9Y4H2 1338 aa22.9■■□□□ 1.26
CLDND1-217ENST00000508071 SPDYE2BA6NHP3 402 aa22.9■■□□□ 1.26
CLDND1-217ENST00000508071 SPDYE6P0CI01 402 aa22.9■■□□□ 1.26
CLDND1-217ENST00000508071 IL1R1P14778 569 aa22.9■■□□□ 1.26
CLDND1-217ENST00000508071 IREB2P48200 963 aaKnown RBP22.9■■□□□ 1.26
CLDND1-217ENST00000508071 PCDHAC2Q9Y5I4 1007 aa22.9■■□□□ 1.26
CLDND1-217ENST00000508071 IL16Q14005 1332 aa22.89■■□□□ 1.26
CLDND1-217ENST00000508071 IGF2BP3O00425 579 aaKnown RBP eCLIP22.89■■□□□ 1.25
CLDND1-217ENST00000508071 RBM5P52756 815 aaKnown RBP eCLIP22.89■■□□□ 1.25
CLDND1-217ENST00000508071 FKBP1AP62942 108 aaKnown RBP22.89■■□□□ 1.25
CLDND1-217ENST00000508071 INTS3Q68E01 1043 aaKnown RBP22.89■■□□□ 1.25
CLDND1-217ENST00000508071 OTUD7BQ6GQQ9 843 aa22.89■■□□□ 1.25
CLDND1-217ENST00000508071 OTOP1Q7RTM1 612 aa22.89■■□□□ 1.25
CLDND1-217ENST00000508071 NBPF12Q5TAG4 269 aaPredicted RBP22.88■■□□□ 1.25
CLDND1-217ENST00000508071 GCC1Q96CN9 775 aa22.88■■□□□ 1.25
CLDND1-217ENST00000508071 ERO1AQ96HE7 468 aa22.88■■□□□ 1.25
CLDND1-217ENST00000508071 PRMT6Q96LA8 375 aaPredicted RBP22.88■■□□□ 1.25
CLDND1-217ENST00000508071 FOXO4P98177 505 aa22.87■■□□□ 1.25
CLDND1-217ENST00000508071 JAG2Q9Y219 1238 aa22.87■■□□□ 1.25
CLDND1-217ENST00000508071 TAF7LQ5H9L4 462 aa22.86■■□□□ 1.25
CLDND1-217ENST00000508071 ANKRD13AQ8IZ07 590 aa22.86■■□□□ 1.25
CLDND1-217ENST00000508071 CENPFP49454 3210 aa22.86■■□□□ 1.25
CLDND1-217ENST00000508071 KIAA0100Q14667 2235 aaKnown RBP22.86■■□□□ 1.25
CLDND1-217ENST00000508071 CRHR2Q13324 411 aa22.85■■□□□ 1.25
CLDND1-217ENST00000508071 RASA3Q14644 834 aa22.85■■□□□ 1.25
CLDND1-217ENST00000508071 AOX1Q06278 1338 aa22.84■■□□□ 1.25
CLDND1-217ENST00000508071 FANCIQ9NVI1 1328 aa22.84■■□□□ 1.25
CLDND1-217ENST00000508071 MKI67P46013 3256 aaKnown RBP22.84■■□□□ 1.25
CLDND1-217ENST00000508071 PLIN1O60240 522 aa22.84■■□□□ 1.25
CLDND1-217ENST00000508071 USP2O75604 605 aaPredicted RBP22.84■■□□□ 1.25
CLDND1-217ENST00000508071 TNFAIP1Q13829 316 aa22.84■■□□□ 1.25
CLDND1-217ENST00000508071 CCDC57Q2TAC2 916 aa22.84■■□□□ 1.25
CLDND1-217ENST00000508071 LMBR1LQ6UX01 489 aa22.84■■□□□ 1.25
CLDND1-217ENST00000508071 CD99L2Q8TCZ2 262 aa22.84■■□□□ 1.25
CLDND1-217ENST00000508071 PTPN22Q9Y2R2 807 aa22.84■■□□□ 1.25
CLDND1-217ENST00000508071 POTEFA5A3E0 1075 aa22.83■■□□□ 1.25
CLDND1-217ENST00000508071 GJA5P36382 358 aa22.83■■□□□ 1.25
CLDND1-217ENST00000508071 LDHAL6AQ6ZMR3 332 aa22.83■■□□□ 1.25
CLDND1-217ENST00000508071 EFCC1Q9HA90 598 aa22.83■■□□□ 1.25
CLDND1-217ENST00000508071 CNNM1Q9NRU3 951 aa22.83■■□□□ 1.25
CLDND1-217ENST00000508071 OTOFQ9HC10 1997 aa22.82■■□□□ 1.24
CLDND1-217ENST00000508071 CCDC184Q52MB2 194 aa22.82■■□□□ 1.24
CLDND1-217ENST00000508071 ZNF594Q96JF6 807 aaPredicted RBP22.82■■□□□ 1.24
CLDND1-217ENST00000508071 RBBP6Q7Z6E9 1792 aaKnown RBP22.81■■□□□ 1.24
CLDND1-217ENST00000508071 F6X3S4 739 aa22.81■■□□□ 1.24
CLDND1-217ENST00000508071 VAMP4O75379 141 aa22.81■■□□□ 1.24
CLDND1-217ENST00000508071 SP3Q02447 781 aa22.81■■□□□ 1.24
CLDND1-217ENST00000508071 NCBP3Q53F19 620 aaKnown RBP22.81■■□□□ 1.24
CLDND1-217ENST00000508071 BEND3Q5T5X7 828 aa22.81■■□□□ 1.24
CLDND1-217ENST00000508071 ELP3Q9H9T3 547 aa22.81■■□□□ 1.24
CLDND1-217ENST00000508071 ZNF70Q9UC06 446 aaPredicted RBP22.81■■□□□ 1.24
CLDND1-217ENST00000508071 FAM205AQ6ZU69 1335 aa22.81■■□□□ 1.24
CLDND1-217ENST00000508071 TESPA1A2RU30 521 aaPredicted RBP22.8■■□□□ 1.24
CLDND1-217ENST00000508071 SPDYE2Q495Y8 402 aa22.8■■□□□ 1.24
CLDND1-217ENST00000508071 MFSD14BQ5SR56 506 aa22.8■■□□□ 1.24
CLDND1-217ENST00000508071 OPTNQ96CV9 577 aa22.8■■□□□ 1.24
CLDND1-217ENST00000508071 PTPN18Q99952 460 aa22.8■■□□□ 1.24
CLDND1-217ENST00000508071 SERPINA10Q9UK55 444 aa22.8■■□□□ 1.24
CLDND1-217ENST00000508071 TTF2Q9UNY4 1162 aaKnown RBP22.8■■□□□ 1.24
CLDND1-217ENST00000508071 EPHA10Q5JZY3 1008 aa22.79■■□□□ 1.24
CLDND1-217ENST00000508071 ARMC5Q96C12 935 aa22.79■■□□□ 1.24
CLDND1-217ENST00000508071 GRM8O00222 908 aa22.78■■□□□ 1.24
CLDND1-217ENST00000508071 EXOSC9Q06265 439 aaKnown RBP22.78■■□□□ 1.24
CLDND1-217ENST00000508071 TDRD7Q8NHU6 1098 aaKnown RBP22.78■■□□□ 1.24
CLDND1-217ENST00000508071 TDRD3Q9H7E2 651 aaKnown RBP22.78■■□□□ 1.24
CLDND1-217ENST00000508071 HIBADHP31937 336 aaKnown RBP22.77■■□□□ 1.24
CLDND1-217ENST00000508071 UBE4AQ14139 1066 aa22.77■■□□□ 1.24
CLDND1-217ENST00000508071 C9orf78Q9NZ63 289 aaPredicted RBP22.77■■□□□ 1.24
CLDND1-217ENST00000508071 ARAP2Q8WZ64 1704 aa22.77■■□□□ 1.23
CLDND1-217ENST00000508071 GYG1P46976 350 aa22.76■■□□□ 1.23
CLDND1-217ENST00000508071 ARHGEF6Q15052 776 aa22.76■■□□□ 1.23
CLDND1-217ENST00000508071 HABP4Q5JVS0 413 aaKnown RBP22.76■■□□□ 1.23
CLDND1-217ENST00000508071 WDR63Q8IWG1 891 aa22.76■■□□□ 1.23
CLDND1-217ENST00000508071 DZIP1LQ8IYY4 767 aaKnown RBP22.76■■□□□ 1.23
CLDND1-217ENST00000508071 MS4A4AQ96JQ5 239 aa22.76■■□□□ 1.23
CLDND1-217ENST00000508071 BRCA2P51587 3418 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms