RNA–Protein interactions for RNA: ENST00000506951.5

PACRGL-217, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-217ENST00000506951 MIER1Q8N108 512 aa27.46■■□□□ 1.99
PACRGL-217ENST00000506951 NBPF9Q3BBW0 867 aa27.45■■□□□ 1.98
PACRGL-217ENST00000506951 VPS37DQ86XT2 251 aa27.45■■□□□ 1.98
PACRGL-217ENST00000506951 IPO8O15397 1037 aaKnown RBP27.44■■□□□ 1.98
PACRGL-217ENST00000506951 NF2P35240 595 aa27.44■■□□□ 1.98
PACRGL-217ENST00000506951 CAVIN4Q5BKX8 364 aa27.44■■□□□ 1.98
PACRGL-217ENST00000506951 RGMBQ6NW40 437 aa27.44■■□□□ 1.98
PACRGL-217ENST00000506951 DLK2Q6UY11 383 aa27.44■■□□□ 1.98
PACRGL-217ENST00000506951 APOBEC3FQ8IUX4 373 aaKnown RBP27.44■■□□□ 1.98
PACRGL-217ENST00000506951 CCDC102AQ96A19 550 aa27.44■■□□□ 1.98
PACRGL-217ENST00000506951 CA12O43570 354 aa27.43■■□□□ 1.98
PACRGL-217ENST00000506951 DLGAP5Q15398 846 aa27.43■■□□□ 1.98
PACRGL-217ENST00000506951 COL1A1P02452 1464 aaPredicted RBP27.43■■□□□ 1.98
PACRGL-217ENST00000506951 FAM205AQ6ZU69 1335 aa27.42■■□□□ 1.98
PACRGL-217ENST00000506951 MYO1BO43795 1136 aa27.42■■□□□ 1.98
PACRGL-217ENST00000506951 AOC2O75106 756 aa27.42■■□□□ 1.98
PACRGL-217ENST00000506951 PDE8BO95263 885 aa27.42■■□□□ 1.98
PACRGL-217ENST00000506951 HNRNPUQ00839 825 aaKnown RBP eCLIP27.42■■□□□ 1.98
PACRGL-217ENST00000506951 MTMR14Q8NCE2 650 aa27.42■■□□□ 1.98
PACRGL-217ENST00000506951 TDRD7Q8NHU6 1098 aaKnown RBP27.42■■□□□ 1.98
PACRGL-217ENST00000506951 FBXO3Q9UK99 471 aa27.42■■□□□ 1.98
PACRGL-217ENST00000506951 GYG1P46976 350 aa27.41■■□□□ 1.98
PACRGL-217ENST00000506951 LRRC24Q50LG9 513 aa27.41■■□□□ 1.98
PACRGL-217ENST00000506951 CERS5Q8N5B7 392 aa27.41■■□□□ 1.98
PACRGL-217ENST00000506951 ZBED3Q96IU2 234 aaPredicted RBP27.4■■□□□ 1.98
PACRGL-217ENST00000506951 FAM84BQ96KN1 310 aaPredicted RBP27.4■■□□□ 1.98
PACRGL-217ENST00000506951 EYA2O00167 538 aa27.39■■□□□ 1.98
PACRGL-217ENST00000506951 ZNF157P51786 506 aaPredicted RBP27.39■■□□□ 1.98
PACRGL-217ENST00000506951 PUM3Q15397 648 aaKnown RBP27.39■■□□□ 1.98
PACRGL-217ENST00000506951 MFSD14BQ5SR56 506 aa27.39■■□□□ 1.98
PACRGL-217ENST00000506951 VGLL2Q8N8G2 317 aa27.39■■□□□ 1.98
PACRGL-217ENST00000506951 GNAI3P08754 354 aa27.38■■□□□ 1.97
PACRGL-217ENST00000506951 IFIT1P09914 478 aaKnown RBP27.38■■□□□ 1.97
PACRGL-217ENST00000506951 LBX1P52954 281 aa27.38■■□□□ 1.97
PACRGL-217ENST00000506951 INTS3Q68E01 1043 aaKnown RBP27.38■■□□□ 1.97
PACRGL-217ENST00000506951 MYH13Q9UKX3 1938 aa27.37■■□□□ 1.97
PACRGL-217ENST00000506951 FRAT2O75474 233 aaPredicted RBP27.37■■□□□ 1.97
PACRGL-217ENST00000506951 HSPA8P11142 646 aaKnown RBP27.37■■□□□ 1.97
PACRGL-217ENST00000506951 RFX5P48382 616 aaPredicted RBP27.37■■□□□ 1.97
PACRGL-217ENST00000506951 KLHDC4Q8TBB5 520 aa27.37■■□□□ 1.97
PACRGL-217ENST00000506951 TBC1D22AQ8WUA7 517 aa27.37■■□□□ 1.97
PACRGL-217ENST00000506951 PPP2R3BQ9Y5P8 575 aa27.37■■□□□ 1.97
PACRGL-217ENST00000506951 F8W031 263 aaPredicted RBP27.36■■□□□ 1.97
PACRGL-217ENST00000506951 PTPN12Q05209 780 aaKnown RBP27.36■■□□□ 1.97
PACRGL-217ENST00000506951 FBXO33Q7Z6M2 555 aa27.36■■□□□ 1.97
PACRGL-217ENST00000506951 LRRFIP2Q9Y608 721 aaKnown RBP27.36■■□□□ 1.97
PACRGL-217ENST00000506951 CIAO1O76071 339 aa27.35■■□□□ 1.97
PACRGL-217ENST00000506951 CFAP100Q494V2 611 aa27.35■■□□□ 1.97
PACRGL-217ENST00000506951 JAG2Q9Y219 1238 aa27.35■■□□□ 1.97
PACRGL-217ENST00000506951 SPDYE2BA6NHP3 402 aa27.34■■□□□ 1.97
PACRGL-217ENST00000506951 SLC10A3P09131 477 aa27.34■■□□□ 1.97
PACRGL-217ENST00000506951 SPDYE6P0CI01 402 aa27.34■■□□□ 1.97
PACRGL-217ENST00000506951 SLC5A1P13866 664 aa27.34■■□□□ 1.97
PACRGL-217ENST00000506951 RBM5P52756 815 aaKnown RBP eCLIP27.34■■□□□ 1.97
PACRGL-217ENST00000506951 TTLL12Q14166 644 aaPredicted RBP27.34■■□□□ 1.97
PACRGL-217ENST00000506951 ATF7IPQ6VMQ6 1270 aa27.34■■□□□ 1.97
PACRGL-217ENST00000506951 REM2Q8IYK8 340 aaPredicted RBP27.34■■□□□ 1.97
PACRGL-217ENST00000506951 SERPINA10Q9UK55 444 aa27.34■■□□□ 1.97
PACRGL-217ENST00000506951 FAM155AB1AL88 458 aaPredicted RBP27.33■■□□□ 1.97
PACRGL-217ENST00000506951 LPIN2Q92539 896 aa27.33■■□□□ 1.97
PACRGL-217ENST00000506951 FRAT1Q92837 279 aaPredicted RBP27.33■■□□□ 1.97
PACRGL-217ENST00000506951 TTF2Q9UNY4 1162 aaKnown RBP27.33■■□□□ 1.97
PACRGL-217ENST00000506951 AKAP11Q9UKA4 1901 aa27.33■■□□□ 1.97
PACRGL-217ENST00000506951 TRIM27P14373 513 aa27.32■■□□□ 1.96
PACRGL-217ENST00000506951 MEIS3Q99687 375 aa27.32■■□□□ 1.96
PACRGL-217ENST00000506951 SCAF8Q9UPN6 1271 aaKnown RBP27.32■■□□□ 1.96
PACRGL-217ENST00000506951 FGFR2P21802 821 aa27.31■■□□□ 1.96
PACRGL-217ENST00000506951 TNFAIP1Q13829 316 aa27.31■■□□□ 1.96
PACRGL-217ENST00000506951 ARMC9Q7Z3E5 817 aa27.31■■□□□ 1.96
PACRGL-217ENST00000506951 CEP126Q9P2H0 1117 aa27.31■■□□□ 1.96
PACRGL-217ENST00000506951 IL15P40933 162 aaPredicted RBP27.3■■□□□ 1.96
PACRGL-217ENST00000506951 PRAMEF18Q5VWM3 479 aa27.3■■□□□ 1.96
PACRGL-217ENST00000506951 SIL1Q9H173 461 aa27.3■■□□□ 1.96
PACRGL-217ENST00000506951 DEFB129Q9H1M3 183 aa27.3■■□□□ 1.96
PACRGL-217ENST00000506951 MAST3O60307 1309 aa27.3■■□□□ 1.96
PACRGL-217ENST00000506951 BCAR3O75815 825 aa27.29■■□□□ 1.96
PACRGL-217ENST00000506951 CHAF1AQ13111 956 aaPredicted RBP27.29■■□□□ 1.96
PACRGL-217ENST00000506951 ZKSCAN2Q63HK3 967 aa27.29■■□□□ 1.96
PACRGL-217ENST00000506951 ATG9AQ7Z3C6 839 aa27.29■■□□□ 1.96
PACRGL-217ENST00000506951 SUGT1Q9Y2Z0 365 aa27.29■■□□□ 1.96
PACRGL-217ENST00000506951 ZBED9Q6R2W3 1325 aa27.29■■□□□ 1.96
PACRGL-217ENST00000506951 BCAMP50895 628 aa27.28■■□□□ 1.96
PACRGL-217ENST00000506951 HDLBPQ00341 1268 aaKnown RBP27.28■■□□□ 1.96
PACRGL-217ENST00000506951 RASAL3Q86YV0 1011 aa27.28■■□□□ 1.96
PACRGL-217ENST00000506951 PRMT6Q96LA8 375 aaPredicted RBP27.28■■□□□ 1.96
PACRGL-217ENST00000506951 VEZTQ9HBM0 779 aa27.28■■□□□ 1.96
PACRGL-217ENST00000506951 COPRSQ9NQ92 184 aa27.28■■□□□ 1.96
PACRGL-217ENST00000506951 SAGE1Q9NXZ1 904 aa27.28■■□□□ 1.96
PACRGL-217ENST00000506951 IQSEC3Q9UPP2 1182 aaPredicted RBP27.28■■□□□ 1.96
PACRGL-217ENST00000506951 KIF23Q02241 960 aaPredicted RBP27.27■■□□□ 1.96
PACRGL-217ENST00000506951 ATP2B3Q16720 1220 aa27.27■■□□□ 1.96
PACRGL-217ENST00000506951 SUPT20HL1Q3ZLR7 823 aa27.27■■□□□ 1.96
PACRGL-217ENST00000506951 GNL3LQ9NVN8 582 aaKnown RBP27.27■■□□□ 1.96
PACRGL-217ENST00000506951 CLRN2A0PK11 232 aa27.26■■□□□ 1.95
PACRGL-217ENST00000506951 MTX1Q13505 466 aa27.26■■□□□ 1.95
PACRGL-217ENST00000506951 UBE2Q2LH0YL09 131 aa27.25■■□□□ 1.95
PACRGL-217ENST00000506951 PPP1R12BO60237 982 aaPredicted RBP27.25■■□□□ 1.95
PACRGL-217ENST00000506951 CRKP46108 304 aa27.25■■□□□ 1.95
PACRGL-217ENST00000506951 WDR66Q8TBY9 1149 aa27.25■■□□□ 1.95
PACRGL-217ENST00000506951 ZIC5Q96T25 663 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms