RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 CDCA5Q96FF9 252 aa11.4□□□□□ -0.58
PDLIM5-209ENST00000506632 GBA2Q9HCG7 927 aaPredicted RBP11.4□□□□□ -0.58
PDLIM5-209ENST00000506632 FAM205AQ6ZU69 1335 aa11.39□□□□□ -0.59
PDLIM5-209ENST00000506632 KIF16BQ96L93 1317 aa11.39□□□□□ -0.59
PDLIM5-209ENST00000506632 HUNKP57058 714 aa11.39□□□□□ -0.59
PDLIM5-209ENST00000506632 MAP2K1Q02750 393 aaPredicted RBP11.39□□□□□ -0.59
PDLIM5-209ENST00000506632 PAXIP1Q6ZW49 1069 aaPredicted RBP11.39□□□□□ -0.59
PDLIM5-209ENST00000506632 KIAA0825Q8IV33 1275 aa11.39□□□□□ -0.59
PDLIM5-209ENST00000506632 MTMR14Q8NCE2 650 aa11.39□□□□□ -0.59
PDLIM5-209ENST00000506632 KLHDC4Q8TBB5 520 aa11.39□□□□□ -0.59
PDLIM5-209ENST00000506632 FAM84BQ96KN1 310 aaPredicted RBP11.39□□□□□ -0.59
PDLIM5-209ENST00000506632 AOC2O75106 756 aa11.38□□□□□ -0.59
PDLIM5-209ENST00000506632 SASH1O94885 1247 aa11.38□□□□□ -0.59
PDLIM5-209ENST00000506632 PDE8BO95263 885 aa11.38□□□□□ -0.59
PDLIM5-209ENST00000506632 CTCFP49711 727 aaPredicted RBP11.38□□□□□ -0.59
PDLIM5-209ENST00000506632 PTPN12Q05209 780 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-209ENST00000506632 INTS3Q68E01 1043 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-209ENST00000506632 FBXO33Q7Z6M2 555 aa11.38□□□□□ -0.59
PDLIM5-209ENST00000506632 C2orf69Q8N8R5 385 aa11.38□□□□□ -0.59
PDLIM5-209ENST00000506632 PRDM10Q9NQV6 1147 aa11.38□□□□□ -0.59
PDLIM5-209ENST00000506632 HDAC9Q9UKV0 1011 aa11.38□□□□□ -0.59
PDLIM5-209ENST00000506632 PAPPA2Q9BXP8 1791 aa11.38□□□□□ -0.59
PDLIM5-209ENST00000506632 ARAP2Q8WZ64 1704 aa11.38□□□□□ -0.59
PDLIM5-209ENST00000506632 UBTFL1P0CB47 393 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-209ENST00000506632 HSPA8P11142 646 aaKnown RBP11.37□□□□□ -0.59
PDLIM5-209ENST00000506632 FGFR2P21802 821 aa11.37□□□□□ -0.59
PDLIM5-209ENST00000506632 HIBADHP31937 336 aaKnown RBP11.37□□□□□ -0.59
PDLIM5-209ENST00000506632 GYG1P46976 350 aa11.37□□□□□ -0.59
PDLIM5-209ENST00000506632 FKBP1BP68106 108 aa11.37□□□□□ -0.59
PDLIM5-209ENST00000506632 GRM1Q13255 1194 aa11.37□□□□□ -0.59
PDLIM5-209ENST00000506632 METTL24Q5JXM2 366 aa11.37□□□□□ -0.59
PDLIM5-209ENST00000506632 RGMBQ6NW40 437 aa11.37□□□□□ -0.59
PDLIM5-209ENST00000506632 AIDAQ96BJ3 306 aa11.37□□□□□ -0.59
PDLIM5-209ENST00000506632 ECM29Q5VYK3 1845 aa11.37□□□□□ -0.59
PDLIM5-209ENST00000506632 FAM155AB1AL88 458 aaPredicted RBP11.36□□□□□ -0.59
PDLIM5-209ENST00000506632 EYA2O00167 538 aa11.36□□□□□ -0.59
PDLIM5-209ENST00000506632 HNRNPUQ00839 825 aaKnown RBP eCLIP11.36□□□□□ -0.59
PDLIM5-209ENST00000506632 NOGQ13253 232 aa11.36□□□□□ -0.59
PDLIM5-209ENST00000506632 ATG9AQ7Z3C6 839 aa11.36□□□□□ -0.59
PDLIM5-209ENST00000506632 MEIS3Q99687 375 aa11.36□□□□□ -0.59
PDLIM5-209ENST00000506632 SCAF8Q9UPN6 1271 aaKnown RBP11.36□□□□□ -0.59
PDLIM5-209ENST00000506632 COL1A1P02452 1464 aaPredicted RBP11.36□□□□□ -0.59
PDLIM5-209ENST00000506632 SPDYE2BA6NHP3 402 aa11.35□□□□□ -0.59
PDLIM5-209ENST00000506632 BCAR3O75815 825 aa11.35□□□□□ -0.59
PDLIM5-209ENST00000506632 CIAO1O76071 339 aa11.35□□□□□ -0.59
PDLIM5-209ENST00000506632 SPDYE6P0CI01 402 aa11.35□□□□□ -0.59
PDLIM5-209ENST00000506632 TRIM27P14373 513 aa11.35□□□□□ -0.59
PDLIM5-209ENST00000506632 LBX1P52954 281 aa11.35□□□□□ -0.59
PDLIM5-209ENST00000506632 DLGAP5Q15398 846 aa11.35□□□□□ -0.59
PDLIM5-209ENST00000506632 MFSD14BQ5SR56 506 aa11.35□□□□□ -0.59
PDLIM5-209ENST00000506632 APOBEC3FQ8IUX4 373 aaKnown RBP11.35□□□□□ -0.59
PDLIM5-209ENST00000506632 ZIC5Q96T25 663 aa11.35□□□□□ -0.59
PDLIM5-209ENST00000506632 HDAC5Q9UQL6 1122 aa11.35□□□□□ -0.59
PDLIM5-209ENST00000506632 JAG2Q9Y219 1238 aa11.35□□□□□ -0.59
PDLIM5-209ENST00000506632 PCDHAC2Q9Y5I4 1007 aa11.35□□□□□ -0.59
PDLIM5-209ENST00000506632 LRRFIP2Q9Y608 721 aaKnown RBP11.35□□□□□ -0.59
PDLIM5-209ENST00000506632 IPO8O15397 1037 aaKnown RBP11.34□□□□□ -0.59
PDLIM5-209ENST00000506632 SLC10A3P09131 477 aa11.34□□□□□ -0.59
PDLIM5-209ENST00000506632 MTX1Q13505 466 aa11.34□□□□□ -0.59
PDLIM5-209ENST00000506632 PUM3Q15397 648 aaKnown RBP11.34□□□□□ -0.59
PDLIM5-209ENST00000506632 CFAP100Q494V2 611 aa11.34□□□□□ -0.59
PDLIM5-209ENST00000506632 PRAMEF18Q5VWM3 479 aa11.34□□□□□ -0.59
PDLIM5-209ENST00000506632 ATF7IPQ6VMQ6 1270 aa11.34□□□□□ -0.59
PDLIM5-209ENST00000506632 TNS4Q8IZW8 715 aa11.34□□□□□ -0.59
PDLIM5-209ENST00000506632 CCDC102AQ96A19 550 aa11.34□□□□□ -0.59
PDLIM5-209ENST00000506632 PRMT6Q96LA8 375 aaPredicted RBP11.34□□□□□ -0.59
PDLIM5-209ENST00000506632 TNNQ9UQP3 1299 aa11.34□□□□□ -0.59
PDLIM5-209ENST00000506632 AOX1Q06278 1338 aa11.34□□□□□ -0.59
PDLIM5-209ENST00000506632 ZBED9Q6R2W3 1325 aa11.34□□□□□ -0.59
PDLIM5-209ENST00000506632 F8W031 263 aaPredicted RBP11.33□□□□□ -0.6
PDLIM5-209ENST00000506632 CA12O43570 354 aa11.33□□□□□ -0.6
PDLIM5-209ENST00000506632 GNAI3P08754 354 aa11.33□□□□□ -0.6
PDLIM5-209ENST00000506632 IFIT1P09914 478 aaKnown RBP11.33□□□□□ -0.6
PDLIM5-209ENST00000506632 BCAMP50895 628 aa11.33□□□□□ -0.6
PDLIM5-209ENST00000506632 ZNF157P51786 506 aaPredicted RBP11.33□□□□□ -0.6
PDLIM5-209ENST00000506632 GRIK5Q16478 980 aa11.33□□□□□ -0.6
PDLIM5-209ENST00000506632 CAVIN4Q5BKX8 364 aa11.33□□□□□ -0.6
PDLIM5-209ENST00000506632 MOB2Q70IA6 237 aa11.33□□□□□ -0.6
PDLIM5-209ENST00000506632 RASAL3Q86YV0 1011 aa11.33□□□□□ -0.6
PDLIM5-209ENST00000506632 LPIN2Q92539 896 aa11.33□□□□□ -0.6
PDLIM5-209ENST00000506632 BEGAINQ9BUH8 593 aa11.33□□□□□ -0.6
PDLIM5-209ENST00000506632 COPRSQ9NQ92 184 aa11.33□□□□□ -0.6
PDLIM5-209ENST00000506632 SERPINA10Q9UK55 444 aa11.33□□□□□ -0.6
PDLIM5-209ENST00000506632 SSC5DA1L4H1 1573 aa11.33□□□□□ -0.6
PDLIM5-209ENST00000506632 SLC5A1P13866 664 aa11.32□□□□□ -0.6
PDLIM5-209ENST00000506632 VPS37DQ86XT2 251 aa11.32□□□□□ -0.6
PDLIM5-209ENST00000506632 TBC1D22AQ8WUA7 517 aa11.32□□□□□ -0.6
PDLIM5-209ENST00000506632 DEFB129Q9H1M3 183 aa11.32□□□□□ -0.6
PDLIM5-209ENST00000506632 TTF2Q9UNY4 1162 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-209ENST00000506632 IQSEC3Q9UPP2 1182 aaPredicted RBP11.32□□□□□ -0.6
PDLIM5-209ENST00000506632 PA2G4Q9UQ80 394 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-209ENST00000506632 PPP2R3BQ9Y5P8 575 aa11.32□□□□□ -0.6
PDLIM5-209ENST00000506632 CLRN2A0PK11 232 aa11.31□□□□□ -0.6
PDLIM5-209ENST00000506632 UBE2Q2LH0YL09 131 aa11.31□□□□□ -0.6
PDLIM5-209ENST00000506632 MYO1BO43795 1136 aa11.31□□□□□ -0.6
PDLIM5-209ENST00000506632 NF2P35240 595 aa11.31□□□□□ -0.6
PDLIM5-209ENST00000506632 IL15P40933 162 aaPredicted RBP11.31□□□□□ -0.6
PDLIM5-209ENST00000506632 HDLBPQ00341 1268 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-209ENST00000506632 KIF23Q02241 960 aaPredicted RBP11.31□□□□□ -0.6
PDLIM5-209ENST00000506632 SPDYE2Q495Y8 402 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 427.9 ms