RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 NF2P35240 595 aa4.65□□□□□ -1.67
TCOF1-208ENST00000506063 PSMC4P43686 418 aa4.65□□□□□ -1.67
TCOF1-208ENST00000506063 FOXK2Q01167 660 aa4.65□□□□□ -1.67
TCOF1-208ENST00000506063 PRKCZQ05513 592 aa4.65□□□□□ -1.67
TCOF1-208ENST00000506063 GRAPQ13588 217 aa4.65□□□□□ -1.67
TCOF1-208ENST00000506063 GRIN2CQ14957 1233 aa4.65□□□□□ -1.67
TCOF1-208ENST00000506063 POTEEQ6S8J3 1075 aa4.65□□□□□ -1.67
TCOF1-208ENST00000506063 GRAPLQ8TC17 118 aaPredicted RBP4.65□□□□□ -1.67
TCOF1-208ENST00000506063 PHOX2BQ99453 314 aa4.65□□□□□ -1.67
TCOF1-208ENST00000506063 CARD11Q9BXL7 1154 aa4.65□□□□□ -1.67
TCOF1-208ENST00000506063 THEGQ9P2T0 379 aa4.65□□□□□ -1.67
TCOF1-208ENST00000506063 GABRQQ9UN88 632 aa4.65□□□□□ -1.67
TCOF1-208ENST00000506063 RLFQ13129 1914 aa4.65□□□□□ -1.67
TCOF1-208ENST00000506063 ARAP2Q8WZ64 1704 aa4.65□□□□□ -1.67
TCOF1-208ENST00000506063 MYPNQ86TC9 1320 aa4.65□□□□□ -1.67
TCOF1-208ENST00000506063 ATRXP46100 2492 aa4.65□□□□□ -1.67
TCOF1-208ENST00000506063 GBF1Q92538 1859 aa4.64□□□□□ -1.67
TCOF1-208ENST00000506063 DNAH14Q0VDD8 3507 aa4.64□□□□□ -1.67
TCOF1-208ENST00000506063 ERVV-1B6SEH8 477 aa4.64□□□□□ -1.67
TCOF1-208ENST00000506063 USP2O75604 605 aaPredicted RBP4.64□□□□□ -1.67
TCOF1-208ENST00000506063 SASH1O94885 1247 aa4.64□□□□□ -1.67
TCOF1-208ENST00000506063 TFRCP02786 760 aaKnown RBP4.64□□□□□ -1.67
TCOF1-208ENST00000506063 INHAP05111 366 aa4.64□□□□□ -1.67
TCOF1-208ENST00000506063 COL6A1P12109 1028 aa4.64□□□□□ -1.67
TCOF1-208ENST00000506063 UBXN2AP68543 259 aa4.64□□□□□ -1.67
TCOF1-208ENST00000506063 GPSM2P81274 684 aa4.64□□□□□ -1.67
TCOF1-208ENST00000506063 MRPS5P82675 430 aaKnown RBP4.64□□□□□ -1.67
TCOF1-208ENST00000506063 SMAD3P84022 425 aaKnown RBP4.64□□□□□ -1.67
TCOF1-208ENST00000506063 SHHQ15465 462 aa4.64□□□□□ -1.67
TCOF1-208ENST00000506063 C9orf50Q5SZB4 431 aa4.64□□□□□ -1.67
TCOF1-208ENST00000506063 TTLL7Q6ZT98 887 aa4.64□□□□□ -1.67
TCOF1-208ENST00000506063 ANKLE1Q8NAG6 615 aa4.64□□□□□ -1.67
TCOF1-208ENST00000506063 SLAIN1Q8ND83 568 aa4.64□□□□□ -1.67
TCOF1-208ENST00000506063 TBC1D16Q8TBP0 767 aa4.64□□□□□ -1.67
TCOF1-208ENST00000506063 RAET1EQ8TD07 263 aa4.64□□□□□ -1.67
TCOF1-208ENST00000506063 COL26A1Q96A83 441 aa4.64□□□□□ -1.67
TCOF1-208ENST00000506063 OPTNQ96CV9 577 aa4.64□□□□□ -1.67
TCOF1-208ENST00000506063 NLRP3Q96P20 1036 aa4.64□□□□□ -1.67
TCOF1-208ENST00000506063 FAM186AA6NE01 2351 aa4.64□□□□□ -1.67
TCOF1-208ENST00000506063 CACNA1HO95180 2353 aa4.64□□□□□ -1.67
TCOF1-208ENST00000506063 MAP3K15Q6ZN16 1313 aa4.64□□□□□ -1.67
TCOF1-208ENST00000506063 TRANK1O15050 2925 aa4.64□□□□□ -1.67
TCOF1-208ENST00000506063 PTPRFP10586 1907 aa4.64□□□□□ -1.67
TCOF1-208ENST00000506063 PRRC2BQ5JSZ5 2229 aaKnown RBP4.64□□□□□ -1.67
TCOF1-208ENST00000506063 VPS13AQ96RL7 3174 aa4.63□□□□□ -1.67
TCOF1-208ENST00000506063 CHD6Q8TD26 2715 aa4.63□□□□□ -1.67
TCOF1-208ENST00000506063 RIF1Q5UIP0 2472 aaKnown RBP4.63□□□□□ -1.67
TCOF1-208ENST00000506063 CCL15-CCL14A0A0B4J2E2 113 aa4.63□□□□□ -1.67
TCOF1-208ENST00000506063 BTBD19C9JJ37 291 aa4.63□□□□□ -1.67
TCOF1-208ENST00000506063 ELNP15502 786 aa4.63□□□□□ -1.67
TCOF1-208ENST00000506063 CCL15Q16663 113 aa4.63□□□□□ -1.67
TCOF1-208ENST00000506063 LRRC26Q2I0M4 334 aa4.63□□□□□ -1.67
TCOF1-208ENST00000506063 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.63□□□□□ -1.67
TCOF1-208ENST00000506063 NPM2Q86SE8 214 aaKnown RBP4.63□□□□□ -1.67
TCOF1-208ENST00000506063 CELF1Q92879 486 aaKnown RBP4.63□□□□□ -1.67
TCOF1-208ENST00000506063 FBXL18Q96ME1 805 aa4.63□□□□□ -1.67
TCOF1-208ENST00000506063 MXD3Q9BW11 206 aa4.63□□□□□ -1.67
TCOF1-208ENST00000506063 NBPF3Q9H094 633 aa4.63□□□□□ -1.67
TCOF1-208ENST00000506063 TMX4Q9H1E5 349 aaPredicted RBP4.63□□□□□ -1.67
TCOF1-208ENST00000506063 DEFB129Q9H1M3 183 aa4.63□□□□□ -1.67
TCOF1-208ENST00000506063 ZCCHC17Q9NP64 241 aaKnown RBP4.63□□□□□ -1.67
TCOF1-208ENST00000506063 AOX1Q06278 1338 aa4.63□□□□□ -1.67
TCOF1-208ENST00000506063 FASNP49327 2511 aaKnown RBP4.63□□□□□ -1.67
TCOF1-208ENST00000506063 PLXNA3P51805 1871 aa4.62□□□□□ -1.67
TCOF1-208ENST00000506063 C6orf229H3BNL8 230 aa4.62□□□□□ -1.67
TCOF1-208ENST00000506063 SMIM22K7EJ46 135 aa4.62□□□□□ -1.67
TCOF1-208ENST00000506063 ADGRE1Q14246 886 aa4.62□□□□□ -1.67
TCOF1-208ENST00000506063 KIF22Q14807 665 aa4.62□□□□□ -1.67
TCOF1-208ENST00000506063 DACT2Q5SW24 774 aa4.62□□□□□ -1.67
TCOF1-208ENST00000506063 AKNAD1Q5T1N1 836 aa4.62□□□□□ -1.67
TCOF1-208ENST00000506063 NBPF12Q5TAG4 269 aaPredicted RBP4.62□□□□□ -1.67
TCOF1-208ENST00000506063 TMC4Q7Z404 712 aa4.62□□□□□ -1.67
TCOF1-208ENST00000506063 PODNQ7Z5L7 613 aa4.62□□□□□ -1.67
TCOF1-208ENST00000506063 APOBEC3FQ8IUX4 373 aaKnown RBP4.62□□□□□ -1.67
TCOF1-208ENST00000506063 ANKRD13AQ8IZ07 590 aa4.62□□□□□ -1.67
TCOF1-208ENST00000506063 PXYLP1Q8TE99 480 aa4.62□□□□□ -1.67
TCOF1-208ENST00000506063 C11orf49Q9H6J7 331 aa4.62□□□□□ -1.67
TCOF1-208ENST00000506063 ELP3Q9H9T3 547 aa4.62□□□□□ -1.67
TCOF1-208ENST00000506063 PODXL2Q9NZ53 605 aa4.62□□□□□ -1.67
TCOF1-208ENST00000506063 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.62□□□□□ -1.67
TCOF1-208ENST00000506063 BIN2Q9UBW5 565 aaPredicted RBP4.62□□□□□ -1.67
TCOF1-208ENST00000506063 CPA4Q9UI42 421 aa4.62□□□□□ -1.67
TCOF1-208ENST00000506063 NSFL1CQ9UNZ2 370 aaKnown RBP4.62□□□□□ -1.67
TCOF1-208ENST00000506063 DMXL1Q9Y485 3027 aa4.62□□□□□ -1.67
TCOF1-208ENST00000506063 PI4K2BG5E9Z4 385 aa4.61□□□□□ -1.67
TCOF1-208ENST00000506063 PPP1R12BO60237 982 aaPredicted RBP4.61□□□□□ -1.67
TCOF1-208ENST00000506063 ADCY3O60266 1144 aa4.61□□□□□ -1.67
TCOF1-208ENST00000506063 ST18O60284 1047 aa4.61□□□□□ -1.67
TCOF1-208ENST00000506063 RGS20O76081 388 aa4.61□□□□□ -1.67
TCOF1-208ENST00000506063 SNRPA1P09661 255 aaKnown RBP4.61□□□□□ -1.67
TCOF1-208ENST00000506063 BCRP11274 1271 aa4.61□□□□□ -1.67
TCOF1-208ENST00000506063 HCLS1P14317 486 aaPredicted RBP4.61□□□□□ -1.67
TCOF1-208ENST00000506063 HOXD10P28358 340 aa4.61□□□□□ -1.67
TCOF1-208ENST00000506063 KCNQ1P51787 676 aa4.61□□□□□ -1.67
TCOF1-208ENST00000506063 GTF2A2P52657 109 aa4.61□□□□□ -1.67
TCOF1-208ENST00000506063 TFF2Q03403 129 aa4.61□□□□□ -1.67
TCOF1-208ENST00000506063 IRF5Q13568 498 aa4.61□□□□□ -1.67
TCOF1-208ENST00000506063 LRP10Q7Z4F1 713 aa4.61□□□□□ -1.67
TCOF1-208ENST00000506063 CDAN1Q8IWY9 1227 aa4.61□□□□□ -1.67
TCOF1-208ENST00000506063 HELBQ8NG08 1087 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms