RNA–Protein interactions for RNA: ENST00000505831.1

SUDS3P1-201, Transcript of SDS3 homolog, SIN3A corepressor complex component pseudogene 1, humanhuman

BASIC

Gene SUDS3P1, Length 966 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3P1-201ENST00000505831 RASAL3Q86YV0 1011 aa28.03■■■□□ 2.08
SUDS3P1-201ENST00000505831 PUS3Q9BZE2 481 aaKnown RBP28.03■■■□□ 2.08
SUDS3P1-201ENST00000505831 RIPOR2Q9Y4F9 1068 aa28.03■■■□□ 2.08
SUDS3P1-201ENST00000505831 TRMT2AQ8IZ69 625 aaKnown RBP28.02■■■□□ 2.08
SUDS3P1-201ENST00000505831 SAGE1Q9NXZ1 904 aa28.02■■■□□ 2.08
SUDS3P1-201ENST00000505831 PLIN1O60240 522 aa28.01■■■□□ 2.07
SUDS3P1-201ENST00000505831 UBE4AQ14139 1066 aa28.01■■■□□ 2.07
SUDS3P1-201ENST00000505831 ARAP2Q8WZ64 1704 aa28.01■■■□□ 2.07
SUDS3P1-201ENST00000505831 UBE2Q2LH0YL09 131 aa28■■■□□ 2.07
SUDS3P1-201ENST00000505831 REM2Q8IYK8 340 aaPredicted RBP28■■■□□ 2.07
SUDS3P1-201ENST00000505831 ANKRD44Q8N8A2 993 aa28■■■□□ 2.07
SUDS3P1-201ENST00000505831 CDCA7LQ96GN5 454 aa28■■■□□ 2.07
SUDS3P1-201ENST00000505831 BICC1Q9H694 974 aaKnown RBP28■■■□□ 2.07
SUDS3P1-201ENST00000505831 RNF186Q9NXI6 227 aa28■■■□□ 2.07
SUDS3P1-201ENST00000505831 FAM205AQ6ZU69 1335 aa27.99■■■□□ 2.07
SUDS3P1-201ENST00000505831 APOBEC3FQ8IUX4 373 aaKnown RBP27.99■■■□□ 2.07
SUDS3P1-201ENST00000505831 TDRD7Q8NHU6 1098 aaKnown RBP27.99■■■□□ 2.07
SUDS3P1-201ENST00000505831 USP44Q9H0E7 712 aa27.99■■■□□ 2.07
SUDS3P1-201ENST00000505831 DLGAP5Q15398 846 aa27.98■■■□□ 2.07
SUDS3P1-201ENST00000505831 FAM84BQ96KN1 310 aaPredicted RBP27.98■■■□□ 2.07
SUDS3P1-201ENST00000505831 LAMB1P07942 1786 aa27.97■■■□□ 2.07
SUDS3P1-201ENST00000505831 ALDH1L2Q3SY69 923 aa27.97■■■□□ 2.07
SUDS3P1-201ENST00000505831 PCDHAC2Q9Y5I4 1007 aa27.97■■■□□ 2.07
SUDS3P1-201ENST00000505831 PRMT6Q96LA8 375 aaPredicted RBP27.96■■■□□ 2.07
SUDS3P1-201ENST00000505831 COL1A1P02452 1464 aaPredicted RBP27.95■■■□□ 2.07
SUDS3P1-201ENST00000505831 MROH5Q6ZUA9 1318 aa27.95■■■□□ 2.07
SUDS3P1-201ENST00000505831 TRPA1O75762 1119 aa27.95■■■□□ 2.06
SUDS3P1-201ENST00000505831 NF2P35240 595 aa27.95■■■□□ 2.06
SUDS3P1-201ENST00000505831 HIBADHP31937 336 aaKnown RBP27.94■■■□□ 2.06
SUDS3P1-201ENST00000505831 GYG1P46976 350 aa27.94■■■□□ 2.06
SUDS3P1-201ENST00000505831 CFAP100Q494V2 611 aa27.94■■■□□ 2.06
SUDS3P1-201ENST00000505831 LDLRAD1Q5T700 205 aa27.94■■■□□ 2.06
SUDS3P1-201ENST00000505831 MCOLN1Q9GZU1 580 aa27.94■■■□□ 2.06
SUDS3P1-201ENST00000505831 DEFB129Q9H1M3 183 aa27.94■■■□□ 2.06
SUDS3P1-201ENST00000505831 JAG2Q9Y219 1238 aa27.94■■■□□ 2.06
SUDS3P1-201ENST00000505831 MYH13Q9UKX3 1938 aa27.94■■■□□ 2.06
SUDS3P1-201ENST00000505831 SPDYE2BA6NHP3 402 aa27.93■■■□□ 2.06
SUDS3P1-201ENST00000505831 SPDYE6P0CI01 402 aa27.93■■■□□ 2.06
SUDS3P1-201ENST00000505831 LRRC24Q50LG9 513 aa27.93■■■□□ 2.06
SUDS3P1-201ENST00000505831 VGLL2Q8N8G2 317 aa27.93■■■□□ 2.06
SUDS3P1-201ENST00000505831 F8W031 263 aaPredicted RBP27.92■■■□□ 2.06
SUDS3P1-201ENST00000505831 FBXO33Q7Z6M2 555 aa27.92■■■□□ 2.06
SUDS3P1-201ENST00000505831 AOX1Q06278 1338 aa27.92■■■□□ 2.06
SUDS3P1-201ENST00000505831 PTPN12Q05209 780 aaKnown RBP27.91■■■□□ 2.06
SUDS3P1-201ENST00000505831 TTLL12Q14166 644 aaPredicted RBP27.91■■■□□ 2.06
SUDS3P1-201ENST00000505831 CCER2I3L3R5 266 aa27.9■■■□□ 2.06
SUDS3P1-201ENST00000505831 TM4SF4P48230 202 aa27.9■■■□□ 2.06
SUDS3P1-201ENST00000505831 ARMC9Q7Z3E5 817 aa27.9■■■□□ 2.06
SUDS3P1-201ENST00000505831 PPP2R3BQ9Y5P8 575 aa27.9■■■□□ 2.06
SUDS3P1-201ENST00000505831 PDE8BO95263 885 aa27.89■■■□□ 2.06
SUDS3P1-201ENST00000505831 DGKZQ13574 1117 aa27.89■■■□□ 2.06
SUDS3P1-201ENST00000505831 MAP3K11Q16584 847 aa27.89■■■□□ 2.06
SUDS3P1-201ENST00000505831 MFSD14BQ5SR56 506 aa27.89■■■□□ 2.06
SUDS3P1-201ENST00000505831 SSC5DA1L4H1 1573 aa27.89■■■□□ 2.05
SUDS3P1-201ENST00000505831 CT47B1P0C2W7 299 aaPredicted RBP27.88■■■□□ 2.05
SUDS3P1-201ENST00000505831 KLHDC4Q8TBB5 520 aa27.88■■■□□ 2.05
SUDS3P1-201ENST00000505831 MYO1BO43795 1136 aa27.87■■■□□ 2.05
SUDS3P1-201ENST00000505831 RFX5P48382 616 aaPredicted RBP27.87■■■□□ 2.05
SUDS3P1-201ENST00000505831 PRKG1Q13976 671 aa27.87■■■□□ 2.05
SUDS3P1-201ENST00000505831 SMC4Q9NTJ3 1288 aa27.87■■■□□ 2.05
SUDS3P1-201ENST00000505831 SERPINA10Q9UK55 444 aa27.87■■■□□ 2.05
SUDS3P1-201ENST00000505831 ANGEL1Q9UNK9 670 aaKnown RBP27.87■■■□□ 2.05
SUDS3P1-201ENST00000505831 CLRN2A0PK11 232 aa27.86■■■□□ 2.05
SUDS3P1-201ENST00000505831 METTL24Q5JXM2 366 aa27.86■■■□□ 2.05
SUDS3P1-201ENST00000505831 TTF2Q9UNY4 1162 aaKnown RBP27.86■■■□□ 2.05
SUDS3P1-201ENST00000505831 FZD1Q9UP38 647 aa27.86■■■□□ 2.05
SUDS3P1-201ENST00000505831 CCDC85CA6NKD9 419 aa27.85■■■□□ 2.05
SUDS3P1-201ENST00000505831 RGS19P49795 217 aa27.85■■■□□ 2.05
SUDS3P1-201ENST00000505831 OTOFQ9HC10 1997 aa27.85■■■□□ 2.05
SUDS3P1-201ENST00000505831 FGFR2P21802 821 aa27.84■■■□□ 2.05
SUDS3P1-201ENST00000505831 GRIK5Q16478 980 aa27.84■■■□□ 2.05
SUDS3P1-201ENST00000505831 UNCXA6NJT0 531 aa27.83■■■□□ 2.05
SUDS3P1-201ENST00000505831 RBM5P52756 815 aaKnown RBP eCLIP27.83■■■□□ 2.05
SUDS3P1-201ENST00000505831 SUPT20HL1Q3ZLR7 823 aa27.83■■■□□ 2.05
SUDS3P1-201ENST00000505831 SPDYE2Q495Y8 402 aa27.83■■■□□ 2.05
SUDS3P1-201ENST00000505831 NBPF12Q5TAG4 269 aaPredicted RBP27.83■■■□□ 2.05
SUDS3P1-201ENST00000505831 SPRYD7Q5W111 196 aa27.83■■■□□ 2.05
SUDS3P1-201ENST00000505831 KIF16BQ96L93 1317 aa27.83■■■□□ 2.05
SUDS3P1-201ENST00000505831 RASA3Q14644 834 aa27.82■■■□□ 2.04
SUDS3P1-201ENST00000505831 ZNF70Q9UC06 446 aaPredicted RBP27.82■■■□□ 2.04
SUDS3P1-201ENST00000505831 NOB1Q9ULX3 412 aaKnown RBP27.82■■■□□ 2.04
SUDS3P1-201ENST00000505831 EYA2O00167 538 aa27.81■■■□□ 2.04
SUDS3P1-201ENST00000505831 PPP1R12BO60237 982 aaPredicted RBP27.81■■■□□ 2.04
SUDS3P1-201ENST00000505831 CAVIN4Q5BKX8 364 aa27.81■■■□□ 2.04
SUDS3P1-201ENST00000505831 DZIP1LQ8IYY4 767 aaKnown RBP27.81■■■□□ 2.04
SUDS3P1-201ENST00000505831 TDRD3Q9H7E2 651 aaKnown RBP27.81■■■□□ 2.04
SUDS3P1-201ENST00000505831 VEZTQ9HBM0 779 aa27.81■■■□□ 2.04
SUDS3P1-201ENST00000505831 IQSEC3Q9UPP2 1182 aaPredicted RBP27.81■■■□□ 2.04
SUDS3P1-201ENST00000505831 USP2O75604 605 aaPredicted RBP27.8■■■□□ 2.04
SUDS3P1-201ENST00000505831 BCAMP50895 628 aa27.8■■■□□ 2.04
SUDS3P1-201ENST00000505831 HDLBPQ00341 1268 aaKnown RBP27.8■■■□□ 2.04
SUDS3P1-201ENST00000505831 ATG9AQ7Z3C6 839 aa27.8■■■□□ 2.04
SUDS3P1-201ENST00000505831 VPS37DQ86XT2 251 aa27.8■■■□□ 2.04
SUDS3P1-201ENST00000505831 CFHR5Q9BXR6 569 aa27.8■■■□□ 2.04
SUDS3P1-201ENST00000505831 TBC1D8O95759 1140 aa27.79■■■□□ 2.04
SUDS3P1-201ENST00000505831 CRKP46108 304 aa27.79■■■□□ 2.04
SUDS3P1-201ENST00000505831 MKRN3Q13064 507 aaKnown RBP27.79■■■□□ 2.04
SUDS3P1-201ENST00000505831 PUM3Q15397 648 aaKnown RBP27.79■■■□□ 2.04
SUDS3P1-201ENST00000505831 NOM1Q5C9Z4 860 aaKnown RBP27.79■■■□□ 2.04
SUDS3P1-201ENST00000505831 TBC1D22AQ8WUA7 517 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms