RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 HELBQ8NG08 1087 aaPredicted RBP29.42■■■□□ 2.3
DHFR-203ENST00000505337 MYH13Q9UKX3 1938 aa29.42■■■□□ 2.3
DHFR-203ENST00000505337 M0R2C6 588 aa29.42■■■□□ 2.3
DHFR-203ENST00000505337 SLC5A1P13866 664 aa29.42■■■□□ 2.3
DHFR-203ENST00000505337 YBX3P16989 372 aaKnown RBP eCLIP29.42■■■□□ 2.37e-10■□□□□ 10
DHFR-203ENST00000505337 COL9A3Q14050 684 aaPredicted RBP29.42■■■□□ 2.3
DHFR-203ENST00000505337 SLC10A5Q5PT55 438 aa29.42■■■□□ 2.3
DHFR-203ENST00000505337 C3orf67Q6ZVT6 689 aa29.42■■■□□ 2.3
DHFR-203ENST00000505337 ALDH8A1Q9H2A2 487 aaPredicted RBP29.42■■■□□ 2.3
DHFR-203ENST00000505337 UQCRFS1P1P0C7P4 283 aa29.41■■■□□ 2.3
DHFR-203ENST00000505337 RPS6KB1P23443 525 aa29.41■■■□□ 2.3
DHFR-203ENST00000505337 TGFB2P61812 414 aa29.41■■■□□ 2.3
DHFR-203ENST00000505337 BLOC1S2Q6QNY1 142 aa29.41■■■□□ 2.3
DHFR-203ENST00000505337 OSBP2Q969R2 916 aa29.41■■■□□ 2.3
DHFR-203ENST00000505337 CDC5LQ99459 802 aaKnown RBP29.41■■■□□ 2.3
DHFR-203ENST00000505337 BAG4O95429 457 aaKnown RBP29.4■■■□□ 2.3
DHFR-203ENST00000505337 LARGE1O95461 756 aa29.4■■■□□ 2.3
DHFR-203ENST00000505337 CYP21A2P08686 494 aa29.4■■■□□ 2.3
DHFR-203ENST00000505337 NYXQ9GZU5 481 aa29.4■■■□□ 2.3
DHFR-203ENST00000505337 NRXN2Q9P2S2 1712 aa29.4■■■□□ 2.3
DHFR-203ENST00000505337 SERPINB2P05120 415 aa29.4■■■□□ 2.3
DHFR-203ENST00000505337 ZSCAN31Q96LW9 406 aaPredicted RBP29.4■■■□□ 2.3
DHFR-203ENST00000505337 HSPD1P10809 573 aaKnown RBP29.39■■■□□ 2.3
DHFR-203ENST00000505337 TTF1Q15361 905 aaPredicted RBP29.39■■■□□ 2.3
DHFR-203ENST00000505337 APPBP2Q92624 585 aa29.39■■■□□ 2.3
DHFR-203ENST00000505337 SH2B1Q9NRF2 756 aaPredicted RBP29.39■■■□□ 2.3
DHFR-203ENST00000505337 A0A0G2JLW4 131 aa29.38■■■□□ 2.29
DHFR-203ENST00000505337 PTMSP20962 102 aa29.38■■■□□ 2.29
DHFR-203ENST00000505337 BRD1O95696 1058 aa29.37■■■□□ 2.29
DHFR-203ENST00000505337 WWC3Q9ULE0 1092 aa29.37■■■□□ 2.29
DHFR-203ENST00000505337 CHD4Q14839 1912 aa29.37■■■□□ 2.29
DHFR-203ENST00000505337 CHRNDQ07001 517 aa29.37■■■□□ 2.29
DHFR-203ENST00000505337 SETDB2Q96T68 719 aa29.37■■■□□ 2.29
DHFR-203ENST00000505337 LARP6Q9BRS8 491 aaKnown RBP29.37■■■□□ 2.29
DHFR-203ENST00000505337 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.37■■■□□ 2.29
DHFR-203ENST00000505337 TRAK2O60296 914 aa29.36■■■□□ 2.29
DHFR-203ENST00000505337 DPEP1P16444 411 aa29.36■■■□□ 2.29
DHFR-203ENST00000505337 ADD2P35612 726 aa29.35■■■□□ 2.29
DHFR-203ENST00000505337 PIH1D3Q9NQM4 214 aaKnown RBP29.35■■■□□ 2.29
DHFR-203ENST00000505337 TCHHQ07283 1943 aa29.34■■■□□ 2.29
DHFR-203ENST00000505337 FOXP2O15409 715 aa29.34■■■□□ 2.29
DHFR-203ENST00000505337 KCNA3P22001 575 aa29.34■■■□□ 2.29
DHFR-203ENST00000505337 ST3GAL1Q11201 340 aa29.34■■■□□ 2.29
DHFR-203ENST00000505337 ANKRD1Q15327 319 aa29.34■■■□□ 2.29
DHFR-203ENST00000505337 ANKRD18AQ8IVF6 992 aa29.34■■■□□ 2.29
DHFR-203ENST00000505337 NEK1Q96PY6 1258 aa29.34■■■□□ 2.29
DHFR-203ENST00000505337 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.34■■■□□ 2.29
DHFR-203ENST00000505337 SNAP23O00161 211 aa29.34■■■□□ 2.29
DHFR-203ENST00000505337 TOB2Q14106 344 aaPredicted RBP29.34■■■□□ 2.29
DHFR-203ENST00000505337 ZSCAN25Q6NSZ9 544 aa29.34■■■□□ 2.29
DHFR-203ENST00000505337 STOX1Q6ZVD7 989 aa29.34■■■□□ 2.29
DHFR-203ENST00000505337 TPCN1Q9ULQ1 816 aa29.34■■■□□ 2.29
DHFR-203ENST00000505337 CARMIL3Q8ND23 1372 aa29.33■■■□□ 2.29
DHFR-203ENST00000505337 ME3Q16798 604 aa29.33■■■□□ 2.29
DHFR-203ENST00000505337 WASHC4Q2M389 1173 aa29.33■■■□□ 2.29
DHFR-203ENST00000505337 NBPF5PQ86XG9 351 aaPredicted RBP29.33■■■□□ 2.29
DHFR-203ENST00000505337 RASGRF1Q13972 1273 aa29.32■■■□□ 2.28
DHFR-203ENST00000505337 PUS7LQ9H0K6 701 aaKnown RBP29.32■■■□□ 2.28
DHFR-203ENST00000505337 BSDC1Q9NW68 430 aaPredicted RBP29.32■■■□□ 2.28
DHFR-203ENST00000505337 GOLGA6L22H0YM25 854 aa29.31■■■□□ 2.28
DHFR-203ENST00000505337 GTF2E1P29083 439 aaPredicted RBP29.31■■■□□ 2.28
DHFR-203ENST00000505337 SPATA5Q8NB90 893 aa29.31■■■□□ 2.28
DHFR-203ENST00000505337 UBE3CQ15386 1083 aa29.31■■■□□ 2.28
DHFR-203ENST00000505337 TCEANC2Q96MN5 208 aa29.31■■■□□ 2.28
DHFR-203ENST00000505337 PRR5LQ6MZQ0 368 aa29.3■■■□□ 2.28
DHFR-203ENST00000505337 CCDC83Q8IWF9 413 aa29.3■■■□□ 2.28
DHFR-203ENST00000505337 GRIN3BO60391 1043 aa29.29■■■□□ 2.28
DHFR-203ENST00000505337 CHRNA5P30532 468 aa29.29■■■□□ 2.28
DHFR-203ENST00000505337 ZNF804BA4D1E1 1349 aa29.29■■■□□ 2.28
DHFR-203ENST00000505337 GPAA1O43292 621 aa29.28■■■□□ 2.28
DHFR-203ENST00000505337 SLC9C2Q5TAH2 1124 aa29.28■■■□□ 2.28
DHFR-203ENST00000505337 TPTE2Q6XPS3 522 aa29.28■■■□□ 2.28
DHFR-203ENST00000505337 TCRBV5S4A2TA0A5A2 114 aa29.28■■■□□ 2.28
DHFR-203ENST00000505337 HMGB1P09429 215 aaKnown RBP29.28■■■□□ 2.28
DHFR-203ENST00000505337 BRCA1P38398 1863 aaKnown RBP29.28■■■□□ 2.28
DHFR-203ENST00000505337 CCDC24Q8N4L8 307 aa29.28■■■□□ 2.28
DHFR-203ENST00000505337 CELF1Q92879 486 aaKnown RBP29.28■■■□□ 2.28
DHFR-203ENST00000505337 NLRP3Q96P20 1036 aa29.28■■■□□ 2.28
DHFR-203ENST00000505337 IDH1O75874 414 aaKnown RBP29.27■■■□□ 2.28
DHFR-203ENST00000505337 PDE6AP16499 860 aa29.27■■■□□ 2.28
DHFR-203ENST00000505337 YY1P25490 414 aa29.27■■■□□ 2.28
DHFR-203ENST00000505337 SKOR2Q2VWA4 1001 aaPredicted RBP29.27■■■□□ 2.28
DHFR-203ENST00000505337 SMC3Q9UQE7 1217 aa29.27■■■□□ 2.28
DHFR-203ENST00000505337 WDR33Q9C0J8 1336 aaKnown RBP29.27■■■□□ 2.28
DHFR-203ENST00000505337 UBE4AQ14139 1066 aa29.26■■■□□ 2.27
DHFR-203ENST00000505337 CACNA1SQ13698 1873 aa29.26■■■□□ 2.27
DHFR-203ENST00000505337 COL1A1P02452 1464 aaPredicted RBP29.26■■■□□ 2.27
DHFR-203ENST00000505337 BCAMP50895 628 aa29.25■■■□□ 2.27
DHFR-203ENST00000505337 MCTP1Q6DN14 999 aa29.25■■■□□ 2.27
DHFR-203ENST00000505337 CTNNA3Q9UI47 895 aa29.25■■■□□ 2.27
DHFR-203ENST00000505337 MINPP1Q9UNW1 487 aa29.25■■■□□ 2.27
DHFR-203ENST00000505337 MAST2Q6P0Q8 1798 aa29.25■■■□□ 2.27
DHFR-203ENST00000505337 ZNF532Q9HCE3 1301 aa29.25■■■□□ 2.27
DHFR-203ENST00000505337 TIAM2Q8IVF5 1701 aa29.25■■■□□ 2.27
DHFR-203ENST00000505337 E7EWF7 191 aa29.25■■■□□ 2.27
DHFR-203ENST00000505337 TTLL5Q6EMB2 1281 aa29.24■■■□□ 2.27
DHFR-203ENST00000505337 CNBD1Q8NA66 436 aa29.24■■■□□ 2.27
DHFR-203ENST00000505337 BCS1LQ9Y276 419 aa29.24■■■□□ 2.27
DHFR-203ENST00000505337 ANKRD31Q8N7Z5 1873 aa29.24■■■□□ 2.27
DHFR-203ENST00000505337 DHX32Q7L7V1 743 aaKnown RBP29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms