RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 CENPFP49454 3210 aa20.48■□□□□ 0.87
PDLIM7-213ENST00000505074 ARHGEF6Q15052 776 aa20.47■□□□□ 0.87
PDLIM7-213ENST00000505074 ZNF333Q96JL9 665 aa20.47■□□□□ 0.87
PDLIM7-213ENST00000505074 ZNF316A6NFI3 1004 aaPredicted RBP20.46■□□□□ 0.87
PDLIM7-213ENST00000505074 CTSWP56202 376 aa20.46■□□□□ 0.87
PDLIM7-213ENST00000505074 DLGAP5Q15398 846 aa20.46■□□□□ 0.87
PDLIM7-213ENST00000505074 SLC4A8Q2Y0W8 1093 aa20.46■□□□□ 0.87
PDLIM7-213ENST00000505074 SUPT20HL1Q3ZLR7 823 aa20.46■□□□□ 0.87
PDLIM7-213ENST00000505074 LEMD3Q9Y2U8 911 aa20.46■□□□□ 0.87
PDLIM7-213ENST00000505074 SLC4A2P04920 1241 aa20.45■□□□□ 0.86
PDLIM7-213ENST00000505074 GTF2IP78347 998 aa20.45■□□□□ 0.86
PDLIM7-213ENST00000505074 SLC9C1Q4G0N8 1177 aa20.45■□□□□ 0.86
PDLIM7-213ENST00000505074 TXNRD3Q86VQ6 643 aa20.45■□□□□ 0.86
PDLIM7-213ENST00000505074 SSC5DA1L4H1 1573 aa20.45■□□□□ 0.86
PDLIM7-213ENST00000505074 IGKV5-2P06315 115 aa20.44■□□□□ 0.86
PDLIM7-213ENST00000505074 IREB2P48200 963 aaKnown RBP20.44■□□□□ 0.86
PDLIM7-213ENST00000505074 CWF19L2Q2TBE0 894 aaKnown RBP20.44■□□□□ 0.86
PDLIM7-213ENST00000505074 IL16Q14005 1332 aa20.44■□□□□ 0.86
PDLIM7-213ENST00000505074 TESPA1A2RU30 521 aaPredicted RBP20.43■□□□□ 0.86
PDLIM7-213ENST00000505074 H0YGN5 161 aa20.43■□□□□ 0.86
PDLIM7-213ENST00000505074 MYO1BO43795 1136 aa20.43■□□□□ 0.86
PDLIM7-213ENST00000505074 G2E3Q7L622 706 aa20.43■□□□□ 0.86
PDLIM7-213ENST00000505074 ANKRD13AQ8IZ07 590 aa20.43■□□□□ 0.86
PDLIM7-213ENST00000505074 TTLL11Q8NHH1 800 aa20.43■□□□□ 0.86
PDLIM7-213ENST00000505074 OTUD5Q96G74 571 aa20.43■□□□□ 0.86
PDLIM7-213ENST00000505074 GREM2Q9H772 168 aa20.43■□□□□ 0.86
PDLIM7-213ENST00000505074 FANCIQ9NVI1 1328 aa20.43■□□□□ 0.86
PDLIM7-213ENST00000505074 GJA5P36382 358 aa20.42■□□□□ 0.86
PDLIM7-213ENST00000505074 CAP1Q01518 475 aa20.42■□□□□ 0.86
PDLIM7-213ENST00000505074 MTMR14Q8NCE2 650 aa20.42■□□□□ 0.86
PDLIM7-213ENST00000505074 PTPN18Q99952 460 aa20.42■□□□□ 0.86
PDLIM7-213ENST00000505074 PTCH2Q9Y6C5 1203 aa20.42■□□□□ 0.86
PDLIM7-213ENST00000505074 ZNF804BA4D1E1 1349 aa20.42■□□□□ 0.86
PDLIM7-213ENST00000505074 TRIOBPQ9H2D6 2365 aa20.42■□□□□ 0.86
PDLIM7-213ENST00000505074 NEURL1BA8MQ27 555 aa20.41■□□□□ 0.86
PDLIM7-213ENST00000505074 IGHMBP2P38935 993 aaKnown RBP20.41■□□□□ 0.86
PDLIM7-213ENST00000505074 FKBP5Q13451 457 aaPredicted RBP20.41■□□□□ 0.86
PDLIM7-213ENST00000505074 UBE3BQ7Z3V4 1068 aa20.41■□□□□ 0.86
PDLIM7-213ENST00000505074 ANKRD2Q9GZV1 360 aa20.41■□□□□ 0.86
PDLIM7-213ENST00000505074 BRCA2P51587 3418 aa20.41■□□□□ 0.86
PDLIM7-213ENST00000505074 OTOFQ9HC10 1997 aa20.41■□□□□ 0.86
PDLIM7-213ENST00000505074 CEP290O15078 2479 aa20.4■□□□□ 0.86
PDLIM7-213ENST00000505074 USP2O75604 605 aaPredicted RBP20.4■□□□□ 0.86
PDLIM7-213ENST00000505074 FLIIQ13045 1269 aa20.4■□□□□ 0.86
PDLIM7-213ENST00000505074 NBPF12Q5TAG4 269 aaPredicted RBP20.4■□□□□ 0.86
PDLIM7-213ENST00000505074 CHRDL2Q6WN34 429 aa20.39■□□□□ 0.85
PDLIM7-213ENST00000505074 VEZTQ9HBM0 779 aa20.39■□□□□ 0.85
PDLIM7-213ENST00000505074 ZFYVE28Q9HCC9 887 aa20.39■□□□□ 0.85
PDLIM7-213ENST00000505074 CACNA1FO60840 1977 aa20.38■□□□□ 0.85
PDLIM7-213ENST00000505074 CLRN2A0PK11 232 aa20.38■□□□□ 0.85
PDLIM7-213ENST00000505074 DLL1O00548 723 aa20.38■□□□□ 0.85
PDLIM7-213ENST00000505074 MYCP01106 439 aaPredicted RBP20.38■□□□□ 0.85
PDLIM7-213ENST00000505074 KLRK1P26718 216 aa20.38■□□□□ 0.85
PDLIM7-213ENST00000505074 KCNJ4P48050 445 aa20.38■□□□□ 0.85
PDLIM7-213ENST00000505074 TAF1CQ15572 869 aaPredicted RBP20.38■□□□□ 0.85
PDLIM7-213ENST00000505074 CFAP100Q494V2 611 aa20.38■□□□□ 0.85
PDLIM7-213ENST00000505074 FAM9BQ8IZU0 186 aa20.38■□□□□ 0.85
PDLIM7-213ENST00000505074 OPTNQ96CV9 577 aa20.38■□□□□ 0.85
PDLIM7-213ENST00000505074 MYH16Q9H6N6 1097 aa20.38■□□□□ 0.85
PDLIM7-213ENST00000505074 CD209Q9NNX6 404 aa20.38■□□□□ 0.85
PDLIM7-213ENST00000505074 WDR63Q8IWG1 891 aa20.37■□□□□ 0.85
PDLIM7-213ENST00000505074 DNAAF4Q8WXU2 420 aa20.37■□□□□ 0.85
PDLIM7-213ENST00000505074 ELP3Q9H9T3 547 aa20.37■□□□□ 0.85
PDLIM7-213ENST00000505074 SPDYE2BA6NHP3 402 aa20.36■□□□□ 0.85
PDLIM7-213ENST00000505074 SPDYE6P0CI01 402 aa20.36■□□□□ 0.85
PDLIM7-213ENST00000505074 EXOSC9Q06265 439 aaKnown RBP20.36■□□□□ 0.85
PDLIM7-213ENST00000505074 NCBP3Q53F19 620 aaKnown RBP20.36■□□□□ 0.85
PDLIM7-213ENST00000505074 CERS5Q8N5B7 392 aa20.36■□□□□ 0.85
PDLIM7-213ENST00000505074 SLC17A8Q8NDX2 589 aa20.36■□□□□ 0.85
PDLIM7-213ENST00000505074 MS4A4AQ96JQ5 239 aa20.36■□□□□ 0.85
PDLIM7-213ENST00000505074 PRMT6Q96LA8 375 aaPredicted RBP20.36■□□□□ 0.85
PDLIM7-213ENST00000505074 MPHOSPH8Q99549 860 aa20.36■□□□□ 0.85
PDLIM7-213ENST00000505074 PCDHAC2Q9Y5I4 1007 aa20.36■□□□□ 0.85
PDLIM7-213ENST00000505074 F8W031 263 aaPredicted RBP20.35■□□□□ 0.85
PDLIM7-213ENST00000505074 WDHD1O75717 1129 aaPredicted RBP20.35■□□□□ 0.85
PDLIM7-213ENST00000505074 GCKRQ14397 625 aa20.35■□□□□ 0.85
PDLIM7-213ENST00000505074 RASA3Q14644 834 aa20.35■□□□□ 0.85
PDLIM7-213ENST00000505074 DPF3Q92784 378 aa20.35■□□□□ 0.85
PDLIM7-213ENST00000505074 H7C1W4 665 aa20.34■□□□□ 0.85
PDLIM7-213ENST00000505074 KIF22Q14807 665 aa20.34■□□□□ 0.85
PDLIM7-213ENST00000505074 SH3TC2Q8TF17 1288 aa20.34■□□□□ 0.85
PDLIM7-213ENST00000505074 RBM27Q9P2N5 1060 aaKnown RBP20.34■□□□□ 0.85
PDLIM7-213ENST00000505074 ZSWIM8A7E2V4 1837 aa20.33■□□□□ 0.85
PDLIM7-213ENST00000505074 CCL15-CCL14A0A0B4J2E2 113 aa20.33■□□□□ 0.85
PDLIM7-213ENST00000505074 VAMP4O75379 141 aa20.33■□□□□ 0.85
PDLIM7-213ENST00000505074 ITGA6P23229 1130 aa20.33■□□□□ 0.85
PDLIM7-213ENST00000505074 GTF2A2P52657 109 aa20.33■□□□□ 0.85
PDLIM7-213ENST00000505074 RBM5P52756 815 aaKnown RBP eCLIP20.33■□□□□ 0.85
PDLIM7-213ENST00000505074 TNFAIP1Q13829 316 aa20.33■□□□□ 0.85
PDLIM7-213ENST00000505074 CCL15Q16663 113 aa20.33■□□□□ 0.85
PDLIM7-213ENST00000505074 LINS1Q8NG48 757 aa20.33■□□□□ 0.85
PDLIM7-213ENST00000505074 BRI3BPQ8WY22 251 aa20.33■□□□□ 0.85
PDLIM7-213ENST00000505074 FKBP1AP62942 108 aaKnown RBP20.32■□□□□ 0.84
PDLIM7-213ENST00000505074 CHRNDQ07001 517 aa20.32■□□□□ 0.84
PDLIM7-213ENST00000505074 CHMP3Q9Y3E7 222 aa20.32■□□□□ 0.84
PDLIM7-213ENST00000505074 SZT2Q5T011 3432 aa20.31■□□□□ 0.84
PDLIM7-213ENST00000505074 F6X3S4 739 aa20.3■□□□□ 0.84
PDLIM7-213ENST00000505074 GNRH1P01148 92 aa20.3■□□□□ 0.84
PDLIM7-213ENST00000505074 PRMT2P55345 433 aa20.3■□□□□ 0.84
PDLIM7-213ENST00000505074 ZNF804AQ7Z570 1209 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms