RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 IKBKBO14920 756 aa7.57□□□□□ -1.2
COPB2-204ENST00000504295 CSB-PGBD3P0DP91 1061 aa7.57□□□□□ -1.2
COPB2-204ENST00000504295 PI4KAP1Q8N8J0 262 aa7.57□□□□□ -1.2
COPB2-204ENST00000504295 ZSCAN16Q9H4T2 348 aaPredicted RBP7.57□□□□□ -1.2
COPB2-204ENST00000504295 RPS6KA5O75582 802 aa7.57□□□□□ -1.2
COPB2-204ENST00000504295 U2AF2P26368 475 aaKnown RBP eCLIP7.57□□□□□ -1.28e-6■■■■□ 25
COPB2-204ENST00000504295 TNNI3KQ59H18 835 aa7.57□□□□□ -1.2
COPB2-204ENST00000504295 ZNF662Q6ZS27 426 aa7.57□□□□□ -1.2
COPB2-204ENST00000504295 SH3RF1Q7Z6J0 888 aa7.57□□□□□ -1.2
COPB2-204ENST00000504295 NUTM1Q86Y26 1132 aa7.57□□□□□ -1.2
COPB2-204ENST00000504295 FPGT-TNNI3KV9GXZ4 949 aa7.57□□□□□ -1.2
COPB2-204ENST00000504295 PHLPP2Q6ZVD8 1323 aa7.57□□□□□ -1.2
COPB2-204ENST00000504295 USP27XA6NNY8 438 aa7.57□□□□□ -1.2
COPB2-204ENST00000504295 NBPF26B4DH59 902 aa7.57□□□□□ -1.2
COPB2-204ENST00000504295 BMP6P22004 513 aa7.57□□□□□ -1.2
COPB2-204ENST00000504295 NBPF14Q5TI25 921 aa7.57□□□□□ -1.2
COPB2-204ENST00000504295 ARMCX5Q6P1M9 558 aa7.57□□□□□ -1.2
COPB2-204ENST00000504295 NBPF10Q6P3W6 841 aaKnown RBP7.57□□□□□ -1.2
COPB2-204ENST00000504295 REXO1L1PQ8IX06 675 aa7.57□□□□□ -1.2
COPB2-204ENST00000504295 NBPF15Q8N660 670 aa7.57□□□□□ -1.2
COPB2-204ENST00000504295 LARP1Q6PKG0 1096 aaKnown RBP7.56□□□□□ -1.2
COPB2-204ENST00000504295 FCHSD1Q86WN1 690 aa7.56□□□□□ -1.2
COPB2-204ENST00000504295 TNFRSF25Q93038 417 aa7.56□□□□□ -1.2
COPB2-204ENST00000504295 MTA3Q9BTC8 594 aa7.56□□□□□ -1.2
COPB2-204ENST00000504295 UPF3BQ9BZI7 483 aaKnown RBP7.56□□□□□ -1.2
COPB2-204ENST00000504295 SPATA31A5Q5VU36 1347 aa7.56□□□□□ -1.2
COPB2-204ENST00000504295 SPATA31A7Q8IWB4 1347 aa7.56□□□□□ -1.2
COPB2-204ENST00000504295 CPA1P15085 419 aa7.56□□□□□ -1.2
COPB2-204ENST00000504295 RCAN1P53805 252 aa7.56□□□□□ -1.2
COPB2-204ENST00000504295 ANKRD1Q15327 319 aa7.56□□□□□ -1.2
COPB2-204ENST00000504295 BARGINQ6ZT62 677 aa7.56□□□□□ -1.2
COPB2-204ENST00000504295 ZNF572Q7Z3I7 529 aaPredicted RBP7.56□□□□□ -1.2
COPB2-204ENST00000504295 PDRG1Q9NUG6 133 aa7.56□□□□□ -1.2
COPB2-204ENST00000504295 MAST3O60307 1309 aa7.56□□□□□ -1.2
COPB2-204ENST00000504295 MCCP23508 829 aa7.56□□□□□ -1.2
COPB2-204ENST00000504295 CHRNA2Q15822 529 aa7.56□□□□□ -1.2
COPB2-204ENST00000504295 KMT5BQ4FZB7 885 aa7.56□□□□□ -1.2
COPB2-204ENST00000504295 HDGFL1Q5TGJ6 251 aa7.56□□□□□ -1.2
COPB2-204ENST00000504295 CARD10Q9BWT7 1032 aa7.56□□□□□ -1.2
COPB2-204ENST00000504295 CHMP4AQ9BY43 222 aa7.56□□□□□ -1.2
COPB2-204ENST00000504295 SCAND2PQ9GZW5 306 aaPredicted RBP7.56□□□□□ -1.2
COPB2-204ENST00000504295 TTC12Q9H892 705 aaPredicted RBP7.56□□□□□ -1.2
COPB2-204ENST00000504295 FOXD4L1Q9NU39 408 aa7.56□□□□□ -1.2
COPB2-204ENST00000504295 A0A0G2JLW4 131 aa7.55□□□□□ -1.2
COPB2-204ENST00000504295 TUBB4AP04350 444 aa7.55□□□□□ -1.2
COPB2-204ENST00000504295 CASTP20810 708 aaKnown RBP7.55□□□□□ -1.2
COPB2-204ENST00000504295 FGFR2P21802 821 aa7.55□□□□□ -1.2
COPB2-204ENST00000504295 USP5P45974 858 aa7.55□□□□□ -1.2
COPB2-204ENST00000504295 POTEAQ6S8J7 498 aa7.55□□□□□ -1.2
COPB2-204ENST00000504295 TOM1L2Q6ZVM7 507 aa7.55□□□□□ -1.2
COPB2-204ENST00000504295 KBTBD3Q8NAB2 608 aa7.55□□□□□ -1.2
COPB2-204ENST00000504295 STRN4Q9NRL3 753 aa7.55□□□□□ -1.2
COPB2-204ENST00000504295 OGFRQ9NZT2 677 aa7.55□□□□□ -1.2
COPB2-204ENST00000504295 RGS17Q9UGC6 210 aaPredicted RBP7.55□□□□□ -1.2
COPB2-204ENST00000504295 MAP3K2Q9Y2U5 619 aa7.55□□□□□ -1.2
COPB2-204ENST00000504295 CYP27B1O15528 508 aa7.55□□□□□ -1.2
COPB2-204ENST00000504295 NEMFO60524 1076 aa7.55□□□□□ -1.2
COPB2-204ENST00000504295 ALX1Q15699 326 aa7.55□□□□□ -1.2
COPB2-204ENST00000504295 NPY5RQ15761 445 aa7.55□□□□□ -1.2
COPB2-204ENST00000504295 CCAR2Q8N163 923 aaKnown RBP7.55□□□□□ -1.2
COPB2-204ENST00000504295 MAP2K7O14733 419 aa7.55□□□□□ -1.2
COPB2-204ENST00000504295 SOX12O15370 315 aa7.55□□□□□ -1.2
COPB2-204ENST00000504295 SRGAP3O43295 1099 aa7.55□□□□□ -1.2
COPB2-204ENST00000504295 FUT2Q10981 343 aa7.55□□□□□ -1.2
COPB2-204ENST00000504295 ZNF790Q6PG37 636 aa7.55□□□□□ -1.2
COPB2-204ENST00000504295 LINC00301Q8NCQ3 95 aa7.55□□□□□ -1.2
COPB2-204ENST00000504295 GDPD2Q9HCC8 539 aa7.55□□□□□ -1.2
COPB2-204ENST00000504295 NRBP1Q9UHY1 535 aa7.55□□□□□ -1.2
COPB2-204ENST00000504295 PAXBP1Q9Y5B6 917 aa7.55□□□□□ -1.2
COPB2-204ENST00000504295 SPATA31A1Q5TZJ5 1347 aa7.54□□□□□ -1.2
COPB2-204ENST00000504295 ONECUT3O60422 494 aaPredicted RBP7.54□□□□□ -1.2
COPB2-204ENST00000504295 GIMAP6Q6P9H5 292 aa7.54□□□□□ -1.2
COPB2-204ENST00000504295 C17orf53Q8N3J3 647 aaPredicted RBP7.54□□□□□ -1.2
COPB2-204ENST00000504295 R3HCC1Q9Y3T6 440 aaKnown RBP7.54□□□□□ -1.2
COPB2-204ENST00000504295 YEATS4O95619 227 aa7.54□□□□□ -1.2
COPB2-204ENST00000504295 CHGBP05060 677 aa7.54□□□□□ -1.2
COPB2-204ENST00000504295 SGMS1Q86VZ5 419 aa7.54□□□□□ -1.2
COPB2-204ENST00000504295 ANKRD24Q8TF21 1146 aa7.54□□□□□ -1.2
COPB2-204ENST00000504295 ROBO3Q96MS0 1386 aa7.54□□□□□ -1.2
COPB2-204ENST00000504295 ZSWIM8A7E2V4 1837 aa7.54□□□□□ -1.2
COPB2-204ENST00000504295 RGL2O15211 777 aa7.53□□□□□ -1.2
COPB2-204ENST00000504295 CTAGE5O15320 804 aa7.53□□□□□ -1.2
COPB2-204ENST00000504295 IFIT2P09913 472 aaKnown RBP7.53□□□□□ -1.2
COPB2-204ENST00000504295 ARID4AP29374 1257 aaPredicted RBP7.53□□□□□ -1.2
COPB2-204ENST00000504295 PDIA3P30101 505 aaKnown RBP7.53□□□□□ -1.2
COPB2-204ENST00000504295 MCCD1P59942 119 aaPredicted RBP7.53□□□□□ -1.2
COPB2-204ENST00000504295 ADALQ6DHV7 355 aa7.53□□□□□ -1.2
COPB2-204ENST00000504295 TMED8Q6PL24 325 aaPredicted RBP7.53□□□□□ -1.2
COPB2-204ENST00000504295 LRRN4CLQ8ND94 238 aa7.53□□□□□ -1.2
COPB2-204ENST00000504295 SPG7Q9UQ90 795 aa7.53□□□□□ -1.2
COPB2-204ENST00000504295 CYP46A1Q9Y6A2 500 aa7.53□□□□□ -1.2
COPB2-204ENST00000504295 KIF28PB7ZC32 967 aa7.53□□□□□ -1.2
COPB2-204ENST00000504295 PPP6R2O75170 966 aa7.53□□□□□ -1.2
COPB2-204ENST00000504295 CT47A1Q5JQC4 288 aaPredicted RBP7.53□□□□□ -1.2
COPB2-204ENST00000504295 ANO2Q9NQ90 1003 aa7.53□□□□□ -1.2
COPB2-204ENST00000504295 RAB21Q9UL25 225 aa7.53□□□□□ -1.2
COPB2-204ENST00000504295 ATP6V1DQ9Y5K8 247 aa7.53□□□□□ -1.2
COPB2-204ENST00000504295 LCTP09848 1927 aa7.53□□□□□ -1.2
COPB2-204ENST00000504295 M0R2N6 131 aa7.53□□□□□ -1.2
COPB2-204ENST00000504295 ATP8B1O43520 1251 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms