RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 DDX12PQ92771 950 aa18.8■□□□□ 0.6
PCDHA1-203ENST00000504120 PRIM1P49642 420 aaKnown RBP18.8■□□□□ 0.6
PCDHA1-203ENST00000504120 HDAC9Q9UKV0 1011 aa18.8■□□□□ 0.6
PCDHA1-203ENST00000504120 RNMTO43148 476 aaKnown RBP18.8■□□□□ 0.6
PCDHA1-203ENST00000504120 CEP112Q8N8E3 955 aa18.8■□□□□ 0.6
PCDHA1-203ENST00000504120 ZBTB7BO15156 539 aaPredicted RBP18.79■□□□□ 0.6
PCDHA1-203ENST00000504120 ACSBG1Q96GR2 724 aa18.79■□□□□ 0.6
PCDHA1-203ENST00000504120 HSF2BPO75031 334 aa18.79■□□□□ 0.6
PCDHA1-203ENST00000504120 HOXC9P31274 260 aa18.79■□□□□ 0.6
PCDHA1-203ENST00000504120 HS1BP3Q53T59 392 aa18.79■□□□□ 0.6
PCDHA1-203ENST00000504120 HELLSQ9NRZ9 838 aa18.79■□□□□ 0.6
PCDHA1-203ENST00000504120 PUF60Q9UHX1 559 aaKnown RBP18.79■□□□□ 0.6
PCDHA1-203ENST00000504120 GIGYF2Q6Y7W6 1299 aaKnown RBP18.79■□□□□ 0.6
PCDHA1-203ENST00000504120 GTF2F1P35269 517 aaKnown RBP eCLIP18.79■□□□□ 0.6
PCDHA1-203ENST00000504120 IP6K1Q92551 441 aa18.79■□□□□ 0.6
PCDHA1-203ENST00000504120 FERMT1Q9BQL6 677 aa18.79■□□□□ 0.6
PCDHA1-203ENST00000504120 DDX21Q9NR30 783 aaKnown RBP eCLIP18.79■□□□□ 0.6
PCDHA1-203ENST00000504120 CFAP74Q9C0B2 1584 aa18.78■□□□□ 0.6
PCDHA1-203ENST00000504120 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.78■□□□□ 0.6
PCDHA1-203ENST00000504120 GCP02774 474 aa18.78■□□□□ 0.6
PCDHA1-203ENST00000504120 KRT83P78385 493 aa18.78■□□□□ 0.6
PCDHA1-203ENST00000504120 TPTE2Q6XPS3 522 aa18.78■□□□□ 0.6
PCDHA1-203ENST00000504120 RRP36Q96EU6 259 aaKnown RBP18.78■□□□□ 0.6
PCDHA1-203ENST00000504120 TACC1O75410 805 aa18.78■□□□□ 0.6
PCDHA1-203ENST00000504120 STAMBPO95630 424 aa18.78■□□□□ 0.6
PCDHA1-203ENST00000504120 HSP90AA4PQ58FG1 418 aa18.78■□□□□ 0.6
PCDHA1-203ENST00000504120 BICC1Q9H694 974 aaKnown RBP18.78■□□□□ 0.6
PCDHA1-203ENST00000504120 ACTN2P35609 894 aa18.78■□□□□ 0.6
PCDHA1-203ENST00000504120 PRPHP41219 470 aa18.78■□□□□ 0.6
PCDHA1-203ENST00000504120 UBE4AQ14139 1066 aa18.78■□□□□ 0.6
PCDHA1-203ENST00000504120 MAGEB6Q8N7X4 407 aa18.78■□□□□ 0.6
PCDHA1-203ENST00000504120 SELENOOQ9BVL4 669 aa18.78■□□□□ 0.6
PCDHA1-203ENST00000504120 KRT79Q5XKE5 535 aa18.78■□□□□ 0.6
PCDHA1-203ENST00000504120 SPECC1LQ69YQ0 1117 aa18.78■□□□□ 0.6
PCDHA1-203ENST00000504120 ARFGAP3Q9NP61 516 aa18.78■□□□□ 0.6
PCDHA1-203ENST00000504120 MYO5CQ9NQX4 1742 aa18.77■□□□□ 0.6
PCDHA1-203ENST00000504120 BICDL2A1A5D9 508 aa18.77■□□□□ 0.6
PCDHA1-203ENST00000504120 SMARCC2Q8TAQ2 1214 aa18.77■□□□□ 0.6
PCDHA1-203ENST00000504120 C19orf44Q9H6X5 657 aa18.77■□□□□ 0.6
PCDHA1-203ENST00000504120 GIMAP7Q8NHV1 300 aa18.77■□□□□ 0.6
PCDHA1-203ENST00000504120 MMRN2Q9H8L6 949 aa18.77■□□□□ 0.6
PCDHA1-203ENST00000504120 LMOD1P29536 600 aaPredicted RBP18.77■□□□□ 0.6
PCDHA1-203ENST00000504120 ANKRD2Q9GZV1 360 aa18.77■□□□□ 0.6
PCDHA1-203ENST00000504120 KRT222Q8N1A0 295 aa18.77■□□□□ 0.59
PCDHA1-203ENST00000504120 LMAN1P49257 510 aa18.76■□□□□ 0.59
PCDHA1-203ENST00000504120 SBNO2Q9Y2G9 1366 aa18.76■□□□□ 0.59
PCDHA1-203ENST00000504120 PICALMQ13492 652 aa18.76■□□□□ 0.59
PCDHA1-203ENST00000504120 MCM9Q9NXL9 1143 aa18.76■□□□□ 0.59
PCDHA1-203ENST00000504120 MAP3K19Q56UN5 1328 aa18.76■□□□□ 0.59
PCDHA1-203ENST00000504120 CHST3Q7LGC8 479 aa18.76■□□□□ 0.59
PCDHA1-203ENST00000504120 PCDH11XQ9BZA7 1347 aa18.76■□□□□ 0.59
PCDHA1-203ENST00000504120 PCDH11YQ9BZA8 1340 aa18.76■□□□□ 0.59
PCDHA1-203ENST00000504120 MBD5Q9P267 1494 aa18.76■□□□□ 0.59
PCDHA1-203ENST00000504120 GNA11P29992 359 aa18.76■□□□□ 0.59
PCDHA1-203ENST00000504120 OGFOD1Q8N543 542 aa18.76■□□□□ 0.59
PCDHA1-203ENST00000504120 TUBB4BP68371 445 aa18.75■□□□□ 0.59
PCDHA1-203ENST00000504120 CCDC155Q8N6L0 562 aa18.75■□□□□ 0.59
PCDHA1-203ENST00000504120 RBM28Q9NW13 759 aaKnown RBP18.75■□□□□ 0.59
PCDHA1-203ENST00000504120 F8W031 263 aaPredicted RBP18.75■□□□□ 0.59
PCDHA1-203ENST00000504120 CTAGE9A4FU28 777 aa18.75■□□□□ 0.59
PCDHA1-203ENST00000504120 KRT86O43790 486 aa18.75■□□□□ 0.59
PCDHA1-203ENST00000504120 HOXB7P09629 217 aa18.75■□□□□ 0.59
PCDHA1-203ENST00000504120 LMBR1Q8WVP7 490 aa18.75■□□□□ 0.59
PCDHA1-203ENST00000504120 SLU7O95391 586 aaKnown RBP18.74■□□□□ 0.59
PCDHA1-203ENST00000504120 TTC12Q9H892 705 aaPredicted RBP18.74■□□□□ 0.59
PCDHA1-203ENST00000504120 MIGA1Q8NAN2 632 aa18.74■□□□□ 0.59
PCDHA1-203ENST00000504120 NF2P35240 595 aa18.74■□□□□ 0.59
PCDHA1-203ENST00000504120 KIF5AQ12840 1032 aa18.74■□□□□ 0.59
PCDHA1-203ENST00000504120 AOX1Q06278 1338 aa18.74■□□□□ 0.59
PCDHA1-203ENST00000504120 SPDYE3A6NKU9 549 aa18.73■□□□□ 0.59
PCDHA1-203ENST00000504120 RASAL2Q9UJF2 1139 aa18.73■□□□□ 0.59
PCDHA1-203ENST00000504120 SPDYE4A6NLX3 237 aa18.73■□□□□ 0.59
PCDHA1-203ENST00000504120 IQUBQ8NA54 791 aa18.73■□□□□ 0.59
PCDHA1-203ENST00000504120 HOMER2Q9NSB8 354 aa18.73■□□□□ 0.59
PCDHA1-203ENST00000504120 HELBQ8NG08 1087 aaPredicted RBP18.73■□□□□ 0.59
PCDHA1-203ENST00000504120 INSRP06213 1382 aa18.73■□□□□ 0.59
PCDHA1-203ENST00000504120 CABLES1Q8TDN4 633 aa18.73■□□□□ 0.59
PCDHA1-203ENST00000504120 CCDC42Q96M95 316 aa18.73■□□□□ 0.59
PCDHA1-203ENST00000504120 IKBKGQ9Y6K9 419 aa18.73■□□□□ 0.59
PCDHA1-203ENST00000504120 DTHD1Q6ZMT9 781 aa18.73■□□□□ 0.59
PCDHA1-203ENST00000504120 PTGS1P23219 599 aa18.72■□□□□ 0.59
PCDHA1-203ENST00000504120 ZC3H12CQ9C0D7 883 aaKnown RBP18.72■□□□□ 0.59
PCDHA1-203ENST00000504120 RTCBQ9Y3I0 505 aaKnown RBP18.72■□□□□ 0.59
PCDHA1-203ENST00000504120 LDHBP07195 334 aaKnown RBP18.72■□□□□ 0.59
PCDHA1-203ENST00000504120 RPS6KB1P23443 525 aa18.72■□□□□ 0.59
PCDHA1-203ENST00000504120 CCDC97Q96F63 343 aaPredicted RBP18.72■□□□□ 0.59
PCDHA1-203ENST00000504120 TOM1O60784 492 aa18.72■□□□□ 0.59
PCDHA1-203ENST00000504120 PLBD2Q8NHP8 589 aa18.72■□□□□ 0.59
PCDHA1-203ENST00000504120 GOLGA1Q92805 767 aa18.72■□□□□ 0.59
PCDHA1-203ENST00000504120 TNNI2P48788 182 aa18.71■□□□□ 0.59
PCDHA1-203ENST00000504120 EDC4Q6P2E9 1401 aaKnown RBP18.71■□□□□ 0.59
PCDHA1-203ENST00000504120 PHACTR2O75167 634 aa18.71■□□□□ 0.59
PCDHA1-203ENST00000504120 SEC24BO95487 1268 aa18.71■□□□□ 0.59
PCDHA1-203ENST00000504120 MCM7P33993 719 aa18.71■□□□□ 0.59
PCDHA1-203ENST00000504120 DRC1Q96MC2 740 aa18.71■□□□□ 0.59
PCDHA1-203ENST00000504120 SYNCQ9H7C4 482 aa18.71■□□□□ 0.59
PCDHA1-203ENST00000504120 EYA2O00167 538 aa18.71■□□□□ 0.59
PCDHA1-203ENST00000504120 IL13P35225 146 aa18.71■□□□□ 0.59
PCDHA1-203ENST00000504120 UBXN1Q04323 297 aa18.71■□□□□ 0.59
PCDHA1-203ENST00000504120 RNF216Q9NWF9 866 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms