RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 UPF2Q9HAU5 1272 aaKnown RBP8.35□□□□□ -1.07
TOPBP1-203ENST00000503464 ANO2Q9NQ90 1003 aa8.35□□□□□ -1.07
TOPBP1-203ENST00000503464 PODXL2Q9NZ53 605 aa8.35□□□□□ -1.07
TOPBP1-203ENST00000503464 IQSEC3Q9UPP2 1182 aaPredicted RBP8.35□□□□□ -1.07
TOPBP1-203ENST00000503464 SCN9AQ15858 1988 aa8.35□□□□□ -1.07
TOPBP1-203ENST00000503464 CDK5RAP2Q96SN8 1893 aa8.34□□□□□ -1.07
TOPBP1-203ENST00000503464 CCDC171Q6TFL3 1326 aa8.34□□□□□ -1.07
TOPBP1-203ENST00000503464 PSME4Q14997 1843 aa8.34□□□□□ -1.07
TOPBP1-203ENST00000503464 TCRBV5S4A2TA0A5A2 114 aa8.34□□□□□ -1.07
TOPBP1-203ENST00000503464 M0R2C6 588 aa8.34□□□□□ -1.07
TOPBP1-203ENST00000503464 HIP1O00291 1037 aa8.34□□□□□ -1.07
TOPBP1-203ENST00000503464 ZBTB22O15209 634 aa8.34□□□□□ -1.07
TOPBP1-203ENST00000503464 RNF113AO15541 343 aaKnown RBP8.34□□□□□ -1.07
TOPBP1-203ENST00000503464 ZBTB7AO95365 584 aa8.34□□□□□ -1.07
TOPBP1-203ENST00000503464 CD2BP2O95400 341 aaKnown RBP8.34□□□□□ -1.07
TOPBP1-203ENST00000503464 STYK1Q6J9G0 422 aa8.34□□□□□ -1.07
TOPBP1-203ENST00000503464 C15orf52Q6ZUT6 534 aaKnown RBP8.34□□□□□ -1.07
TOPBP1-203ENST00000503464 TICAM2Q86XR7 235 aa8.34□□□□□ -1.07
TOPBP1-203ENST00000503464 SP8Q8IXZ3 490 aa8.34□□□□□ -1.07
TOPBP1-203ENST00000503464 OSBP2Q969R2 916 aa8.34□□□□□ -1.07
TOPBP1-203ENST00000503464 IPO9Q96P70 1041 aaKnown RBP8.34□□□□□ -1.07
TOPBP1-203ENST00000503464 SGIP1Q9BQI5 828 aa8.34□□□□□ -1.07
TOPBP1-203ENST00000503464 POLLQ9UGP5 575 aa8.34□□□□□ -1.07
TOPBP1-203ENST00000503464 WWC3Q9ULE0 1092 aa8.34□□□□□ -1.07
TOPBP1-203ENST00000503464 LEMD3Q9Y2U8 911 aa8.34□□□□□ -1.07
TOPBP1-203ENST00000503464 ATP6V0A2Q9Y487 856 aa8.34□□□□□ -1.07
TOPBP1-203ENST00000503464 PDS5AQ29RF7 1337 aaKnown RBP8.33□□□□□ -1.08
TOPBP1-203ENST00000503464 ADAMTSL1Q8N6G6 1762 aa8.33□□□□□ -1.08
TOPBP1-203ENST00000503464 POTEMA6NI47 508 aa8.33□□□□□ -1.08
TOPBP1-203ENST00000503464 EPB41L2O43491 1005 aaKnown RBP8.33□□□□□ -1.08
TOPBP1-203ENST00000503464 HSPA4P34932 840 aa8.33□□□□□ -1.08
TOPBP1-203ENST00000503464 ADD2P35612 726 aa8.33□□□□□ -1.08
TOPBP1-203ENST00000503464 COL9A3Q14050 684 aaPredicted RBP8.33□□□□□ -1.08
TOPBP1-203ENST00000503464 R3HDM1Q15032 1099 aaKnown RBP8.33□□□□□ -1.08
TOPBP1-203ENST00000503464 TBC1D16Q8TBP0 767 aa8.33□□□□□ -1.08
TOPBP1-203ENST00000503464 ZNF384Q8TF68 577 aa8.33□□□□□ -1.08
TOPBP1-203ENST00000503464 C7orf43Q8WVR3 580 aa8.33□□□□□ -1.08
TOPBP1-203ENST00000503464 KCNB2Q92953 911 aa8.33□□□□□ -1.08
TOPBP1-203ENST00000503464 ANKIB1Q9P2G1 1089 aa8.33□□□□□ -1.08
TOPBP1-203ENST00000503464 TAF6LQ9Y6J9 622 aa8.33□□□□□ -1.08
TOPBP1-203ENST00000503464 FER1L6Q2WGJ9 1857 aa8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 UFL1O94874 794 aa8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 POTEIP0CG38 1075 aa8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 PDE6AP16499 860 aa8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 KCNA3P22001 575 aa8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 ATP2B4P23634 1241 aa8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 HIBADHP31937 336 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 KCNJ4P48050 445 aa8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 NECTIN1Q15223 517 aa8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 MCMDC2Q4G0Z9 681 aa8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 VPS53Q5VIR6 699 aa8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 PRPF40BQ6NWY9 871 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 TMC4Q7Z404 712 aa8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 RASEFQ8IZ41 740 aa8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 TDRD7Q8NHU6 1098 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 RUFY2Q8WXA3 655 aa8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 APPBP2Q92624 585 aa8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 MAP4K1Q92918 833 aa8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 MTFR1LQ9H019 292 aa8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 PUS7LQ9H0K6 701 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 HELLSQ9NRZ9 838 aa8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 PCDH10Q9P2E7 1040 aa8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 GGA1Q9UJY5 639 aa8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 NSFL1CQ9UNZ2 370 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 MYH2Q9UKX2 1941 aa8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 TIAM2Q8IVF5 1701 aa8.32□□□□□ -1.08
TOPBP1-203ENST00000503464 ZNF532Q9HCE3 1301 aa8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 BAZ2AQ9UIF9 1905 aaKnown RBP8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 COL4A5P29400 1685 aa8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 LAMB1P07942 1786 aa8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 A0A0G2JLW4 131 aa8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 PSDA5PKW4 1024 aaPredicted RBP8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 H0YIN7 160 aa8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 SEMA3EO15041 775 aa8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 EIF5BO60841 1220 aaKnown RBP8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 IDH1O75874 414 aaKnown RBP8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 ZFYP08048 801 aaPredicted RBP8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 ALDH1B1P30837 517 aa8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 PTGER2P43116 358 aa8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 SLC4A3P48751 1232 aa8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 TTF1Q15361 905 aaPredicted RBP8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 UBE3CQ15386 1083 aa8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 GRIK5Q16478 980 aa8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 CAVIN4Q5BKX8 364 aa8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 SLC9C2Q5TAH2 1124 aa8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 ADGRA1Q86SQ6 560 aa8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 ZNF622Q969S3 477 aaKnown RBP eCLIP8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 TBC1D2Q9BYX2 928 aa8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 DENND2AQ9ULE3 1009 aa8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 ATF5Q9Y2D1 282 aaPredicted RBP8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 RBM8AQ9Y5S9 174 aaKnown RBP8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 SNX14Q9Y5W7 946 aa8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 RPAP1Q9BWH6 1393 aaPredicted RBP8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 DDX60LQ5H9U9 1706 aaKnown RBP8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 FOCADQ5VW36 1801 aa8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 ARFGEF1Q9Y6D6 1849 aa8.31□□□□□ -1.08
TOPBP1-203ENST00000503464 IL1R1P14778 569 aa8.3□□□□□ -1.08
TOPBP1-203ENST00000503464 DPEP1P16444 411 aa8.3□□□□□ -1.08
TOPBP1-203ENST00000503464 ANAPC15P60006 121 aa8.3□□□□□ -1.08
TOPBP1-203ENST00000503464 ADCK5Q3MIX3 580 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms