RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 HMG20BQ9P0W2 317 aa9.69□□□□□ -0.86
PDZRN3-212ENST00000498048 RNF113AO15541 343 aaKnown RBP9.68□□□□□ -0.86
PDZRN3-212ENST00000498048 CHGBP05060 677 aa9.68□□□□□ -0.86
PDZRN3-212ENST00000498048 ZKSCAN1P17029 563 aaPredicted RBP9.68□□□□□ -0.86
PDZRN3-212ENST00000498048 MCM2P49736 904 aa9.68□□□□□ -0.86
PDZRN3-212ENST00000498048 NEK4P51957 841 aa9.68□□□□□ -0.86
PDZRN3-212ENST00000498048 DCAF8Q5TAQ9 597 aa9.68□□□□□ -0.86
PDZRN3-212ENST00000498048 CREB3L3Q68CJ9 461 aa9.68□□□□□ -0.86
PDZRN3-212ENST00000498048 ZSCAN25Q6NSZ9 544 aa9.68□□□□□ -0.86
PDZRN3-212ENST00000498048 POTEAQ6S8J7 498 aa9.68□□□□□ -0.86
PDZRN3-212ENST00000498048 NOL8Q76FK4 1167 aaKnown RBP9.68□□□□□ -0.86
PDZRN3-212ENST00000498048 RPGRQ92834 1020 aaKnown RBP9.68□□□□□ -0.86
PDZRN3-212ENST00000498048 JAKMIP1Q96N16 626 aaKnown RBP9.68□□□□□ -0.86
PDZRN3-212ENST00000498048 SEC62Q99442 399 aaKnown RBP9.68□□□□□ -0.86
PDZRN3-212ENST00000498048 BSDC1Q9NW68 430 aaPredicted RBP9.68□□□□□ -0.86
PDZRN3-212ENST00000498048 TFCP2L1Q9NZI6 479 aa9.68□□□□□ -0.86
PDZRN3-212ENST00000498048 RGS17Q9UGC6 210 aaPredicted RBP9.68□□□□□ -0.86
PDZRN3-212ENST00000498048 ZNF804BA4D1E1 1349 aa9.67□□□□□ -0.86
PDZRN3-212ENST00000498048 M0R2C6 588 aa9.67□□□□□ -0.86
PDZRN3-212ENST00000498048 SLC27A2O14975 620 aa9.67□□□□□ -0.86
PDZRN3-212ENST00000498048 ECM2O94769 699 aaPredicted RBP9.67□□□□□ -0.86
PDZRN3-212ENST00000498048 SERPINB2P05120 415 aa9.67□□□□□ -0.86
PDZRN3-212ENST00000498048 CASTP20810 708 aaKnown RBP9.67□□□□□ -0.86
PDZRN3-212ENST00000498048 DDR1Q08345 913 aa9.67□□□□□ -0.86
PDZRN3-212ENST00000498048 GRAPQ13588 217 aa9.67□□□□□ -0.86
PDZRN3-212ENST00000498048 RASGRF1Q13972 1273 aa9.67□□□□□ -0.86
PDZRN3-212ENST00000498048 UBE4AQ14139 1066 aa9.67□□□□□ -0.86
PDZRN3-212ENST00000498048 WASHC4Q2M389 1173 aa9.67□□□□□ -0.86
PDZRN3-212ENST00000498048 IL27Q8NEV9 243 aa9.67□□□□□ -0.86
PDZRN3-212ENST00000498048 GRAPLQ8TC17 118 aaPredicted RBP9.67□□□□□ -0.86
PDZRN3-212ENST00000498048 APPBP2Q92624 585 aa9.67□□□□□ -0.86
PDZRN3-212ENST00000498048 MAP4K1Q92918 833 aa9.67□□□□□ -0.86
PDZRN3-212ENST00000498048 FAM212AQ96EL1 285 aa9.67□□□□□ -0.86
PDZRN3-212ENST00000498048 CHMP5Q9NZZ3 219 aa9.67□□□□□ -0.86
PDZRN3-212ENST00000498048 PNPLA7Q6ZV29 1317 aa9.66□□□□□ -0.86
PDZRN3-212ENST00000498048 SNAP23O00161 211 aa9.66□□□□□ -0.86
PDZRN3-212ENST00000498048 POLRMTO00411 1230 aaKnown RBP9.66□□□□□ -0.86
PDZRN3-212ENST00000498048 IDH1O75874 414 aaKnown RBP9.66□□□□□ -0.86
PDZRN3-212ENST00000498048 CYP2E1P05181 493 aaPredicted RBP9.66□□□□□ -0.86
PDZRN3-212ENST00000498048 NECTIN1Q15223 517 aa9.66□□□□□ -0.86
PDZRN3-212ENST00000498048 RASEFQ8IZ41 740 aa9.66□□□□□ -0.86
PDZRN3-212ENST00000498048 SPATA5Q8NB90 893 aa9.66□□□□□ -0.86
PDZRN3-212ENST00000498048 FLAD1Q8NFF5 587 aa9.66□□□□□ -0.86
PDZRN3-212ENST00000498048 KCNB2Q92953 911 aa9.66□□□□□ -0.86
PDZRN3-212ENST00000498048 DSCC1Q9BVC3 393 aa9.66□□□□□ -0.86
PDZRN3-212ENST00000498048 ANKRD2Q9GZV1 360 aa9.66□□□□□ -0.86
PDZRN3-212ENST00000498048 PIH1D3Q9NQM4 214 aaKnown RBP9.66□□□□□ -0.86
PDZRN3-212ENST00000498048 SCN9AQ15858 1988 aa9.66□□□□□ -0.86
PDZRN3-212ENST00000498048 ADD2P35612 726 aa9.65□□□□□ -0.86
PDZRN3-212ENST00000498048 RPS8P62241 208 aaKnown RBP9.65□□□□□ -0.86
PDZRN3-212ENST00000498048 KRT32Q14532 448 aa9.65□□□□□ -0.86
PDZRN3-212ENST00000498048 GSE1Q14687 1217 aa9.65□□□□□ -0.86
PDZRN3-212ENST00000498048 SLFNL1Q499Z3 407 aa9.65□□□□□ -0.86
PDZRN3-212ENST00000498048 TM6SF1Q9BZW5 370 aa9.65□□□□□ -0.86
PDZRN3-212ENST00000498048 GNL3LQ9NVN8 582 aaKnown RBP9.65□□□□□ -0.86
PDZRN3-212ENST00000498048 WWC3Q9ULE0 1092 aa9.65□□□□□ -0.86
PDZRN3-212ENST00000498048 MINPP1Q9UNW1 487 aa9.65□□□□□ -0.86
PDZRN3-212ENST00000498048 CYP46A1Q9Y6A2 500 aa9.65□□□□□ -0.86
PDZRN3-212ENST00000498048 XDHP47989 1333 aa9.64□□□□□ -0.87
PDZRN3-212ENST00000498048 ZNF532Q9HCE3 1301 aa9.64□□□□□ -0.87
PDZRN3-212ENST00000498048 GPAA1O43292 621 aa9.64□□□□□ -0.87
PDZRN3-212ENST00000498048 PDE6AP16499 860 aa9.64□□□□□ -0.87
PDZRN3-212ENST00000498048 PSMA5P28066 241 aa9.64□□□□□ -0.87
PDZRN3-212ENST00000498048 TM4SF1P30408 202 aa9.64□□□□□ -0.87
PDZRN3-212ENST00000498048 GYG1P46976 350 aa9.64□□□□□ -0.87
PDZRN3-212ENST00000498048 BCAMP50895 628 aa9.64□□□□□ -0.87
PDZRN3-212ENST00000498048 AK2P54819 239 aa9.64□□□□□ -0.87
PDZRN3-212ENST00000498048 ADCK5Q3MIX3 580 aa9.64□□□□□ -0.87
PDZRN3-212ENST00000498048 CRY2Q49AN0 593 aa9.64□□□□□ -0.87
PDZRN3-212ENST00000498048 CAVIN4Q5BKX8 364 aa9.64□□□□□ -0.87
PDZRN3-212ENST00000498048 BLOC1S2Q6QNY1 142 aa9.64□□□□□ -0.87
PDZRN3-212ENST00000498048 VPS37DQ86XT2 251 aa9.64□□□□□ -0.87
PDZRN3-212ENST00000498048 COL23A1Q86Y22 540 aaPredicted RBP9.64□□□□□ -0.87
PDZRN3-212ENST00000498048 OSBP2Q969R2 916 aa9.64□□□□□ -0.87
PDZRN3-212ENST00000498048 TMX3Q96JJ7 454 aa9.64□□□□□ -0.87
PDZRN3-212ENST00000498048 TTC14Q96N46 770 aa9.64□□□□□ -0.87
PDZRN3-212ENST00000498048 PDS5AQ29RF7 1337 aaKnown RBP9.63□□□□□ -0.87
PDZRN3-212ENST00000498048 MYH4Q9Y623 1939 aa9.63□□□□□ -0.87
PDZRN3-212ENST00000498048 CPA1P15085 419 aa9.63□□□□□ -0.87
PDZRN3-212ENST00000498048 KLRK1P26718 216 aa9.63□□□□□ -0.87
PDZRN3-212ENST00000498048 DDIT3P35638 169 aa9.63□□□□□ -0.87
PDZRN3-212ENST00000498048 MAP3K12Q12852 859 aa9.63□□□□□ -0.87
PDZRN3-212ENST00000498048 UBE3CQ15386 1083 aa9.63□□□□□ -0.87
PDZRN3-212ENST00000498048 NFKBIBQ15653 356 aa9.63□□□□□ -0.87
PDZRN3-212ENST00000498048 SLC9C2Q5TAH2 1124 aa9.63□□□□□ -0.87
PDZRN3-212ENST00000498048 VPS53Q5VIR6 699 aa9.63□□□□□ -0.87
PDZRN3-212ENST00000498048 MSL1Q68DK7 614 aa9.63□□□□□ -0.87
PDZRN3-212ENST00000498048 RUFY3Q7L099 469 aa9.63□□□□□ -0.87
PDZRN3-212ENST00000498048 RBM17Q96I25 401 aaKnown RBP9.63□□□□□ -0.87
PDZRN3-212ENST00000498048 ANO8Q9HCE9 1232 aaPredicted RBP9.63□□□□□ -0.87
PDZRN3-212ENST00000498048 PDRG1Q9NUG6 133 aa9.63□□□□□ -0.87
PDZRN3-212ENST00000498048 IQSEC3Q9UPP2 1182 aaPredicted RBP9.63□□□□□ -0.87
PDZRN3-212ENST00000498048 ARFGEF1Q9Y6D6 1849 aa9.63□□□□□ -0.87
PDZRN3-212ENST00000498048 FER1L6Q2WGJ9 1857 aa9.62□□□□□ -0.87
PDZRN3-212ENST00000498048 SEMA3EO15041 775 aa9.62□□□□□ -0.87
PDZRN3-212ENST00000498048 CYP21A2P08686 494 aa9.62□□□□□ -0.87
PDZRN3-212ENST00000498048 HSPD1P10809 573 aaKnown RBP9.62□□□□□ -0.87
PDZRN3-212ENST00000498048 BAG6P46379 1132 aa9.62□□□□□ -0.87
PDZRN3-212ENST00000498048 SF3B2Q13435 895 aaKnown RBP9.62□□□□□ -0.87
PDZRN3-212ENST00000498048 NLGN1Q8N2Q7 840 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms