RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 NKX2-3Q8TAU0 364 aa15.21■□□□□ 0.03
PTPN7-217ENST00000495688 ANKRD7Q92527 254 aa15.21■□□□□ 0.03
PTPN7-217ENST00000495688 FAM89AQ96GI7 184 aa15.21■□□□□ 0.03
PTPN7-217ENST00000495688 SDF4Q9BRK5 362 aa15.21■□□□□ 0.03
PTPN7-217ENST00000495688 NWD2Q9ULI1 1742 aa15.21■□□□□ 0.02
PTPN7-217ENST00000495688 KLF18A0A0U1RQI7 1052 aa15.2■□□□□ 0.02
PTPN7-217ENST00000495688 U2AF2P26368 475 aaKnown RBP eCLIP15.2■□□□□ 0.02
PTPN7-217ENST00000495688 CDC25BP30305 580 aa15.2■□□□□ 0.02
PTPN7-217ENST00000495688 ZAP70P43403 619 aa15.2■□□□□ 0.02
PTPN7-217ENST00000495688 NCBP1Q09161 790 aaKnown RBP15.2■□□□□ 0.02
PTPN7-217ENST00000495688 TTC39AQ5SRH9 613 aa15.2■□□□□ 0.02
PTPN7-217ENST00000495688 ZCRB1Q8TBF4 217 aaKnown RBP15.2■□□□□ 0.02
PTPN7-217ENST00000495688 MRFAP1L1Q96HT8 127 aa15.2■□□□□ 0.02
PTPN7-217ENST00000495688 HPS5Q9UPZ3 1129 aa15.2■□□□□ 0.02
PTPN7-217ENST00000495688 NUP188Q5SRE5 1749 aa15.2■□□□□ 0.02
PTPN7-217ENST00000495688 PRC1O43663 620 aa15.2■□□□□ 0.02
PTPN7-217ENST00000495688 CCDC57Q2TAC2 916 aa15.2■□□□□ 0.02
PTPN7-217ENST00000495688 MRPS27Q92552 414 aaKnown RBP15.2■□□□□ 0.02
PTPN7-217ENST00000495688 ANO10Q9NW15 660 aa15.2■□□□□ 0.02
PTPN7-217ENST00000495688 GOLGA8BA8MQT2 603 aa15.2■□□□□ 0.02
PTPN7-217ENST00000495688 CIAO1O76071 339 aa15.2■□□□□ 0.02
PTPN7-217ENST00000495688 ANTXR2P58335 489 aa15.2■□□□□ 0.02
PTPN7-217ENST00000495688 DPCR1Q3MIW9 517 aa15.2■□□□□ 0.02
PTPN7-217ENST00000495688 TOM1L2Q6ZVM7 507 aa15.2■□□□□ 0.02
PTPN7-217ENST00000495688 LINC00301Q8NCQ3 95 aa15.2■□□□□ 0.02
PTPN7-217ENST00000495688 SKILP12757 684 aa15.19■□□□□ 0.02
PTPN7-217ENST00000495688 CCDC158Q5M9N0 1113 aa15.19■□□□□ 0.02
PTPN7-217ENST00000495688 C8orf76Q96K31 380 aa15.19■□□□□ 0.02
PTPN7-217ENST00000495688 TRMT1Q9NXH9 659 aaKnown RBP15.19■□□□□ 0.02
PTPN7-217ENST00000495688 RTEL1Q9NZ71 1219 aa15.19■□□□□ 0.02
PTPN7-217ENST00000495688 CCDC69A6NI79 296 aa15.19■□□□□ 0.02
PTPN7-217ENST00000495688 KIF28PB7ZC32 967 aa15.19■□□□□ 0.02
PTPN7-217ENST00000495688 BIN1O00499 593 aa15.19■□□□□ 0.02
PTPN7-217ENST00000495688 EVCP57679 992 aa15.19■□□□□ 0.02
PTPN7-217ENST00000495688 STK38Q15208 465 aa15.19■□□□□ 0.02
PTPN7-217ENST00000495688 SF3A1Q15459 793 aaKnown RBP15.19■□□□□ 0.02
PTPN7-217ENST00000495688 IMMTQ16891 758 aaKnown RBP15.19■□□□□ 0.02
PTPN7-217ENST00000495688 ADALQ6DHV7 355 aa15.19■□□□□ 0.02
PTPN7-217ENST00000495688 ORC3Q9UBD5 711 aaPredicted RBP15.19■□□□□ 0.02
PTPN7-217ENST00000495688 TNS3Q68CZ2 1445 aa15.18■□□□□ 0.02
PTPN7-217ENST00000495688 NEDD4P46934 1319 aa15.18■□□□□ 0.02
PTPN7-217ENST00000495688 SMTNL1A8MU46 457 aa15.18■□□□□ 0.02
PTPN7-217ENST00000495688 ATL3Q6DD88 541 aa15.18■□□□□ 0.02
PTPN7-217ENST00000495688 MB21D2Q8IYB1 491 aaPredicted RBP15.18■□□□□ 0.02
PTPN7-217ENST00000495688 CEP57L1Q8IYX8 460 aa15.18■□□□□ 0.02
PTPN7-217ENST00000495688 PRDM4Q9UKN5 801 aa15.18■□□□□ 0.02
PTPN7-217ENST00000495688 SPATA31A3Q5VYP0 1347 aa15.18■□□□□ 0.02
PTPN7-217ENST00000495688 RXRAP19793 462 aa15.18■□□□□ 0.02
PTPN7-217ENST00000495688 CCZ1BP86790 482 aa15.18■□□□□ 0.02
PTPN7-217ENST00000495688 CCZ1P86791 482 aaPredicted RBP15.18■□□□□ 0.02
PTPN7-217ENST00000495688 SMAP1Q8IYB5 467 aaPredicted RBP15.18■□□□□ 0.02
PTPN7-217ENST00000495688 FBXO18Q8NFZ0 1043 aa15.18■□□□□ 0.02
PTPN7-217ENST00000495688 AIFM3Q96NN9 605 aa15.18■□□□□ 0.02
PTPN7-217ENST00000495688 PCDH11XQ9BZA7 1347 aa15.17■□□□□ 0.02
PTPN7-217ENST00000495688 PCDH11YQ9BZA8 1340 aa15.17■□□□□ 0.02
PTPN7-217ENST00000495688 NBPF11Q86T75 865 aa15.17■□□□□ 0.02
PTPN7-217ENST00000495688 KCPQ6ZWJ8 1503 aa15.17■□□□□ 0.02
PTPN7-217ENST00000495688 GPAA1O43292 621 aa15.17■□□□□ 0.02
PTPN7-217ENST00000495688 CEP135Q66GS9 1140 aa15.17■□□□□ 0.02
PTPN7-217ENST00000495688 ISM2Q6H9L7 571 aa15.17■□□□□ 0.02
PTPN7-217ENST00000495688 ISCA1Q9BUE6 129 aa15.17■□□□□ 0.02
PTPN7-217ENST00000495688 ATG3Q9NT62 314 aa15.17■□□□□ 0.02
PTPN7-217ENST00000495688 CPLX1O14810 134 aa15.16■□□□□ 0.02
PTPN7-217ENST00000495688 TAF7LQ5H9L4 462 aa15.16■□□□□ 0.02
PTPN7-217ENST00000495688 MYSM1Q5VVJ2 828 aa15.16■□□□□ 0.02
PTPN7-217ENST00000495688 CCDC112Q8NEF3 446 aa15.16■□□□□ 0.02
PTPN7-217ENST00000495688 PRDM11Q9NQV5 511 aa15.16■□□□□ 0.02
PTPN7-217ENST00000495688 KIAA1468Q9P260 1216 aa15.16■□□□□ 0.02
PTPN7-217ENST00000495688 CTNNA3Q9UI47 895 aa15.16■□□□□ 0.02
PTPN7-217ENST00000495688 ABCC6O95255 1503 aa15.16■□□□□ 0.02
PTPN7-217ENST00000495688 SPTLC2O15270 562 aa15.16■□□□□ 0.02
PTPN7-217ENST00000495688 ZSCAN20P17040 1043 aaPredicted RBP15.16■□□□□ 0.02
PTPN7-217ENST00000495688 RBM6P78332 1123 aaKnown RBP15.16■□□□□ 0.02
PTPN7-217ENST00000495688 TCIRG1Q13488 830 aa15.16■□□□□ 0.02
PTPN7-217ENST00000495688 FBXL16Q8N461 479 aa15.16■□□□□ 0.02
PTPN7-217ENST00000495688 NBPF3Q9H094 633 aa15.16■□□□□ 0.02
PTPN7-217ENST00000495688 ERVV-2B6SEH9 535 aa15.15■□□□□ 0.02
PTPN7-217ENST00000495688 MARCKSP29966 332 aaPredicted RBP15.15■□□□□ 0.02
PTPN7-217ENST00000495688 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.15■□□□□ 0.02
PTPN7-217ENST00000495688 APPBP2Q92624 585 aa15.15■□□□□ 0.02
PTPN7-217ENST00000495688 ZNF213O14771 459 aa15.15■□□□□ 0.02
PTPN7-217ENST00000495688 MCAMP43121 646 aa15.15■□□□□ 0.02
PTPN7-217ENST00000495688 RALYLQ86SE5 291 aaKnown RBP15.15■□□□□ 0.02
PTPN7-217ENST00000495688 NCOA7Q8NI08 942 aa15.15■□□□□ 0.02
PTPN7-217ENST00000495688 SENP2Q9HC62 589 aa15.15■□□□□ 0.02
PTPN7-217ENST00000495688 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.15■□□□□ 0.02
PTPN7-217ENST00000495688 V9GYY5 206 aaPredicted RBP15.15■□□□□ 0.02
PTPN7-217ENST00000495688 WDR17Q8IZU2 1322 aa15.14■□□□□ 0.01
PTPN7-217ENST00000495688 A0A1W2PQ27 194 aa15.14■□□□□ 0.01
PTPN7-217ENST00000495688 A0A1W2PQ64 194 aa15.14■□□□□ 0.01
PTPN7-217ENST00000495688 A0A1W2PQD8 194 aa15.14■□□□□ 0.01
PTPN7-217ENST00000495688 GPTP24298 496 aa15.14■□□□□ 0.01
PTPN7-217ENST00000495688 SYTL4Q96C24 671 aaPredicted RBP15.14■□□□□ 0.01
PTPN7-217ENST00000495688 POLR3EQ9NVU0 708 aa15.14■□□□□ 0.01
PTPN7-217ENST00000495688 PAXBP1Q9Y5B6 917 aa15.14■□□□□ 0.01
PTPN7-217ENST00000495688 MROH7-TTC4A0A0A0MT08 1334 aa15.14■□□□□ 0.01
PTPN7-217ENST00000495688 UBR2Q8IWV8 1755 aa15.14■□□□□ 0.01
PTPN7-217ENST00000495688 WDHD1O75717 1129 aaPredicted RBP15.14■□□□□ 0.01
PTPN7-217ENST00000495688 ZNF202O95125 648 aa15.14■□□□□ 0.01
PTPN7-217ENST00000495688 KIF23Q02241 960 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms