RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-245	ENST00000494862	KLRG2	A4D1S0	409 aa	Predicted RBP	13.74	□□□□□ -0.21
HDLBP-245	ENST00000494862	HOXA10	P31260	410 aa	Predicted RBP	13.74	□□□□□ -0.21
HDLBP-245	ENST00000494862	KRT32	Q14532	448 aa		13.74	□□□□□ -0.21
HDLBP-245	ENST00000494862	CAVIN4	Q5BKX8	364 aa		13.74	□□□□□ -0.21
HDLBP-245	ENST00000494862	FBXO33	Q7Z6M2	555 aa		13.74	□□□□□ -0.21
HDLBP-245	ENST00000494862	CAMKK2	Q96RR4	588 aa		13.74	□□□□□ -0.21
HDLBP-245	ENST00000494862	CYP46A1	Q9Y6A2	500 aa		13.74	□□□□□ -0.21
HDLBP-245	ENST00000494862	CASZ1	Q86V15	1759 aa		13.73	□□□□□ -0.21
HDLBP-245	ENST00000494862	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.73	□□□□□ -0.21
HDLBP-245	ENST00000494862	PNPLA7	Q6ZV29	1317 aa		13.73	□□□□□ -0.21
HDLBP-245	ENST00000494862	SEMA3E	O15041	775 aa		13.73	□□□□□ -0.21
HDLBP-245	ENST00000494862	IDH1	O75874	414 aa	Known RBP	13.73	□□□□□ -0.21
HDLBP-245	ENST00000494862	HSPD1	P10809	573 aa	Known RBP	13.73	□□□□□ -0.21
HDLBP-245	ENST00000494862	PDE6A	P16499	860 aa		13.73	□□□□□ -0.21
HDLBP-245	ENST00000494862	CAST	P20810	708 aa	Known RBP	13.73	□□□□□ -0.21
HDLBP-245	ENST00000494862	MAP3K12	Q12852	859 aa		13.73	□□□□□ -0.21
HDLBP-245	ENST00000494862	CUL4A	Q13619	759 aa		13.73	□□□□□ -0.21
HDLBP-245	ENST00000494862	ADCK5	Q3MIX3	580 aa		13.73	□□□□□ -0.21
HDLBP-245	ENST00000494862	SLC9C2	Q5TAH2	1124 aa		13.73	□□□□□ -0.21
HDLBP-245	ENST00000494862	VPS53	Q5VIR6	699 aa		13.73	□□□□□ -0.21
HDLBP-245	ENST00000494862	TMX3	Q96JJ7	454 aa		13.73	□□□□□ -0.21
HDLBP-245	ENST00000494862	FAM84B	Q96KN1	310 aa	Predicted RBP	13.73	□□□□□ -0.21
HDLBP-245	ENST00000494862	CRAMP1	Q96RY5	1269 aa		13.73	□□□□□ -0.21
HDLBP-245	ENST00000494862	PDRG1	Q9NUG6	133 aa		13.73	□□□□□ -0.21
HDLBP-245	ENST00000494862	DENND2A	Q9ULE3	1009 aa		13.73	□□□□□ -0.21
HDLBP-245	ENST00000494862	LEMD3	Q9Y2U8	911 aa		13.73	□□□□□ -0.21
HDLBP-245	ENST00000494862	TCRBV5S4A2T	A0A5A2	114 aa		13.72	□□□□□ -0.21
HDLBP-245	ENST00000494862	BBOX1	O75936	387 aa		13.72	□□□□□ -0.21
HDLBP-245	ENST00000494862	GYG1	P46976	350 aa		13.72	□□□□□ -0.21
HDLBP-245	ENST00000494862	RUFY3	Q7L099	469 aa		13.72	□□□□□ -0.21
HDLBP-245	ENST00000494862	BRIP1	Q9BX63	1249 aa		13.72	□□□□□ -0.21
HDLBP-245	ENST00000494862	PUS7L	Q9H0K6	701 aa	Known RBP	13.72	□□□□□ -0.21
HDLBP-245	ENST00000494862	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.72	□□□□□ -0.21
HDLBP-245	ENST00000494862	CWC22	Q9HCG8	908 aa	Known RBP	13.72	□□□□□ -0.21
HDLBP-245	ENST00000494862	CTNNA3	Q9UI47	895 aa		13.72	□□□□□ -0.21
HDLBP-245	ENST00000494862	WWC3	Q9ULE0	1092 aa		13.72	□□□□□ -0.21
HDLBP-245	ENST00000494862		A0A1B0GUL6	1792 aa		13.72	□□□□□ -0.21
HDLBP-245	ENST00000494862	PDS5A	Q29RF7	1337 aa	Known RBP	13.71	□□□□□ -0.21
HDLBP-245	ENST00000494862	ZNF532	Q9HCE3	1301 aa		13.71	□□□□□ -0.21
HDLBP-245	ENST00000494862	GPAA1	O43292	621 aa		13.71	□□□□□ -0.21
HDLBP-245	ENST00000494862	HIBADH	P31937	336 aa	Known RBP	13.71	□□□□□ -0.21
HDLBP-245	ENST00000494862	AK2	P54819	239 aa		13.71	□□□□□ -0.21
HDLBP-245	ENST00000494862	NFKBIB	Q15653	356 aa		13.71	□□□□□ -0.21
HDLBP-245	ENST00000494862	EZH2	Q15910	746 aa	Known RBP	13.71	□□□□□ -0.21
HDLBP-245	ENST00000494862	BLOC1S2	Q6QNY1	142 aa		13.71	□□□□□ -0.21
HDLBP-245	ENST00000494862	VPS37D	Q86XT2	251 aa		13.71	□□□□□ -0.21
HDLBP-245	ENST00000494862	STK32B	Q9NY57	414 aa		13.71	□□□□□ -0.21
HDLBP-245	ENST00000494862	PARP3	Q9Y6F1	533 aa		13.71	□□□□□ -0.21
HDLBP-245	ENST00000494862	XDH	P47989	1333 aa		13.7	□□□□□ -0.22
HDLBP-245	ENST00000494862	IRS2	Q9Y4H2	1338 aa		13.7	□□□□□ -0.22
HDLBP-245	ENST00000494862	TAF1	P21675	1872 aa		13.7	□□□□□ -0.22
HDLBP-245	ENST00000494862	WTIP	A6NIX2	430 aa	Predicted RBP	13.7	□□□□□ -0.22
HDLBP-245	ENST00000494862	CYP21A2	P08686	494 aa		13.7	□□□□□ -0.22
HDLBP-245	ENST00000494862	RPS6KB1	P23443	525 aa		13.7	□□□□□ -0.22
HDLBP-245	ENST00000494862	EN1	Q05925	392 aa	Predicted RBP	13.7	□□□□□ -0.22
HDLBP-245	ENST00000494862	SLC15A2	Q16348	729 aa		13.7	□□□□□ -0.22
HDLBP-245	ENST00000494862	C15orf52	Q6ZUT6	534 aa	Known RBP	13.7	□□□□□ -0.22
HDLBP-245	ENST00000494862	TMC4	Q7Z404	712 aa		13.7	□□□□□ -0.22
HDLBP-245	ENST00000494862	INTS4	Q96HW7	963 aa	Known RBP	13.7	□□□□□ -0.22
HDLBP-245	ENST00000494862	NEK1	Q96PY6	1258 aa		13.7	□□□□□ -0.22
HDLBP-245	ENST00000494862	LIMCH1	Q9UPQ0	1083 aa		13.7	□□□□□ -0.22
HDLBP-245	ENST00000494862	MMP10	P09238	476 aa		13.69	□□□□□ -0.22
HDLBP-245	ENST00000494862	CPA1	P15085	419 aa		13.69	□□□□□ -0.22
HDLBP-245	ENST00000494862	ATP2B4	P23634	1241 aa		13.69	□□□□□ -0.22
HDLBP-245	ENST00000494862	KLRK1	P26718	216 aa		13.69	□□□□□ -0.22
HDLBP-245	ENST00000494862	NBR1	Q14596	966 aa		13.69	□□□□□ -0.22
HDLBP-245	ENST00000494862	MAGEB6	Q8N7X4	407 aa		13.69	□□□□□ -0.22
HDLBP-245	ENST00000494862	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.69	□□□□□ -0.22
HDLBP-245	ENST00000494862	ANKIB1	Q9P2G1	1089 aa		13.69	□□□□□ -0.22
HDLBP-245	ENST00000494862	TAF6L	Q9Y6J9	622 aa		13.69	□□□□□ -0.22
HDLBP-245	ENST00000494862	FOXP2	O15409	715 aa		13.68	□□□□□ -0.22
HDLBP-245	ENST00000494862	HMGB1	P09429	215 aa	Known RBP	13.68	□□□□□ -0.22
HDLBP-245	ENST00000494862	PDE6B	P35913	854 aa		13.68	□□□□□ -0.22
HDLBP-245	ENST00000494862	BAG6	P46379	1132 aa		13.68	□□□□□ -0.22
HDLBP-245	ENST00000494862	SF3B2	Q13435	895 aa	Known RBP	13.68	□□□□□ -0.22
HDLBP-245	ENST00000494862	ANKRD1	Q15327	319 aa		13.68	□□□□□ -0.22
HDLBP-245	ENST00000494862	NOL8	Q76FK4	1167 aa	Known RBP	13.68	□□□□□ -0.22
HDLBP-245	ENST00000494862	STRBP	Q96SI9	672 aa	Known RBP	13.68	□□□□□ -0.22
HDLBP-245	ENST00000494862	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.68	□□□□□ -0.22
HDLBP-245	ENST00000494862	LRP2BP	Q9P2M1	347 aa		13.68	□□□□□ -0.22
HDLBP-245	ENST00000494862	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.68	□□□□□ -0.22
HDLBP-245	ENST00000494862	NRXN2	Q9P2S2	1712 aa		13.67	□□□□□ -0.22
HDLBP-245	ENST00000494862	MYH7	P12883	1935 aa		13.67	□□□□□ -0.22
HDLBP-245	ENST00000494862	FGA	P02671	866 aa		13.67	□□□□□ -0.22
HDLBP-245	ENST00000494862	NPR1	P16066	1061 aa		13.67	□□□□□ -0.22
HDLBP-245	ENST00000494862	NUCB2	P80303	420 aa		13.67	□□□□□ -0.22
HDLBP-245	ENST00000494862	GPSM2	P81274	684 aa		13.67	□□□□□ -0.22
HDLBP-245	ENST00000494862	RAB3GAP1	Q15042	981 aa		13.67	□□□□□ -0.22
HDLBP-245	ENST00000494862	ALX1	Q15699	326 aa		13.67	□□□□□ -0.22
HDLBP-245	ENST00000494862	IMMT	Q16891	758 aa	Known RBP	13.67	□□□□□ -0.22
HDLBP-245	ENST00000494862	SP8	Q8IXZ3	490 aa		13.67	□□□□□ -0.22
HDLBP-245	ENST00000494862	ZGPAT	Q8N5A5	531 aa	Known RBP	13.67	□□□□□ -0.22
HDLBP-245	ENST00000494862	AIDA	Q96BJ3	306 aa		13.67	□□□□□ -0.22
HDLBP-245	ENST00000494862	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.67	□□□□□ -0.22
HDLBP-245	ENST00000494862	PODXL2	Q9NZ53	605 aa		13.67	□□□□□ -0.22
HDLBP-245	ENST00000494862	COL1A1	P02452	1464 aa	Predicted RBP	13.67	□□□□□ -0.22
HDLBP-245	ENST00000494862	IGSF3	O75054	1194 aa		13.66	□□□□□ -0.22
HDLBP-245	ENST00000494862	FRAT2	O75474	233 aa	Predicted RBP	13.66	□□□□□ -0.22
HDLBP-245	ENST00000494862	SRGN	P10124	158 aa		13.66	□□□□□ -0.22
HDLBP-245	ENST00000494862	GNAT2	P19087	354 aa		13.66	□□□□□ -0.22

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