RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 SMTNP53814 917 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 SETQ01105 290 aaPredicted RBP5.52□□□□□ -1.53
PRKD3-210ENST00000494667 CASP8Q14790 479 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 UBE3BQ7Z3V4 1068 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 TCP11Q8WWU5 503 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 ZKSCAN4Q969J2 545 aaPredicted RBP5.52□□□□□ -1.53
PRKD3-210ENST00000494667 CCDC34Q96HJ3 373 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 SH3GL2Q99962 352 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 VEZTQ9HBM0 779 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 TERF2IPQ9NYB0 399 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 PPP2R2CQ9Y2T4 447 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 NCAPD2Q15021 1401 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 FAM237AA0A1B0GTK4 181 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 ARID3CA6NKF2 412 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 FYB1O15117 783 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 NBPF7P0C2Y1 421 aaPredicted RBP5.52□□□□□ -1.53
PRKD3-210ENST00000494667 POLA2Q14181 598 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 CAMK4Q16566 473 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 WHAMMP3Q1A5X7 153 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 LARP1BQ659C4 914 aaKnown RBP5.52□□□□□ -1.53
PRKD3-210ENST00000494667 C3orf20Q8ND61 904 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 SMARCC2Q8TAQ2 1214 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 BATF3Q9NR55 127 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 MYO1AQ9UBC5 1043 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 CDC23Q9UJX2 597 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 CYP46A1Q9Y6A2 500 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 FAM169AQ9Y6X4 670 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 KIDINS220Q9ULH0 1771 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 GRIN2DO15399 1336 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 PIK3C2AO00443 1686 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 LIN7AO14910 233 aaPredicted RBP5.52□□□□□ -1.53
PRKD3-210ENST00000494667 LMNB2Q03252 620 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 PLEKHO1Q53GL0 409 aaPredicted RBP5.52□□□□□ -1.53
PRKD3-210ENST00000494667 ARHGEF25Q86VW2 580 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 FMR1NBQ8N0W7 255 aaPredicted RBP5.52□□□□□ -1.53
PRKD3-210ENST00000494667 OTUD6BQ8N6M0 293 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 MEIS3Q99687 375 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 XPO4Q9C0E2 1151 aaKnown RBP5.52□□□□□ -1.53
PRKD3-210ENST00000494667 ATP6V0A4Q9HBG4 840 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 AGLP35573 1532 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 URI1O94763 535 aaPredicted RBP5.51□□□□□ -1.53
PRKD3-210ENST00000494667 GNAI2P04899 355 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 CHMP4BP1P59074 171 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 TBC1D8BQ0IIM8 1120 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 B4GALNT4Q76KP1 1039 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 CCDC83Q8IWF9 413 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 SSH3Q8TE77 659 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 SIGLEC1Q9BZZ2 1709 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 FMN2Q9NZ56 1722 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 COL22A1Q8NFW1 1626 aaPredicted RBP5.51□□□□□ -1.53
PRKD3-210ENST00000494667 BECN2A8MW95 431 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 PATL2C9JE40 543 aaKnown RBP5.51□□□□□ -1.53
PRKD3-210ENST00000494667 SASH1O94885 1247 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 CHGAP10645 457 aaKnown RBP5.51□□□□□ -1.53
PRKD3-210ENST00000494667 IL13P35225 146 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 ARHGAP25P42331 645 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 NLRP12P59046 1061 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 PPFIA1Q13136 1202 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 SLC5A9Q2M3M2 681 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 CDCA2Q69YH5 1023 aaPredicted RBP5.51□□□□□ -1.53
PRKD3-210ENST00000494667 SH3GL3Q99963 347 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 NAA15Q9BXJ9 866 aaKnown RBP5.51□□□□□ -1.53
PRKD3-210ENST00000494667 ETAA1Q9NY74 926 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 TRHP20396 242 aaPredicted RBP5.51□□□□□ -1.53
PRKD3-210ENST00000494667 PSMA5P28066 241 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 GIMAP7Q8NHV1 300 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 MKL1Q969V6 931 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 BORCS6Q96GS4 357 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 BICC1Q9H694 974 aaKnown RBP5.51□□□□□ -1.53
PRKD3-210ENST00000494667 FAM204AQ9H8W3 233 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 TUBE1Q9UJT0 475 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 TPCN1Q9ULQ1 816 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 RIMBP3CA6NJZ7 1639 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 RIMBP3BA6NNM3 1639 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 RIMBP3Q9UFD9 1639 aa5.51□□□□□ -1.53
PRKD3-210ENST00000494667 GOLGA6L4A6NEF3 574 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 EBAG9O00559 213 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 EIF3HO15372 352 aaKnown RBP eCLIP5.5□□□□□ -1.53
PRKD3-210ENST00000494667 PRKAR2BP31323 418 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 MNAT1P51948 309 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 HSP90B2PQ58FF3 399 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 ZC3H12AQ5D1E8 599 aaKnown RBP5.5□□□□□ -1.53
PRKD3-210ENST00000494667 CPLX2Q6PUV4 134 aaKnown RBP5.5□□□□□ -1.53
PRKD3-210ENST00000494667 UNC5CLQ8IV45 518 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 AOPEPQ8N6M6 819 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 RUFY2Q8WXA3 655 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 MED23Q9ULK4 1368 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 MYO5BQ9ULV0 1848 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 INPP5BP32019 993 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 RWDD2BP57060 319 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 TRAF1Q13077 416 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 MKRN4PQ13434 485 aaPredicted RBP5.5□□□□□ -1.53
PRKD3-210ENST00000494667 SLMAPQ14BN4 828 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 ZNF662Q6ZS27 426 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 TMC6Q7Z403 805 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 ZNF483Q8TF39 744 aaPredicted RBP5.5□□□□□ -1.53
PRKD3-210ENST00000494667 WDR24Q96S15 920 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 PNKPQ96T60 521 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 TRIM6Q9C030 488 aaPredicted RBP5.5□□□□□ -1.53
PRKD3-210ENST00000494667 GOLPH3LQ9H4A5 285 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms