RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 ERC1Q8IUD2 1116 aa16.71■□□□□ 0.27
COL1A1-208ENST00000494334 CERS5Q8N5B7 392 aa16.71■□□□□ 0.27
COL1A1-208ENST00000494334 FPGT-TNNI3KV9GXZ4 949 aa16.71■□□□□ 0.27
COL1A1-208ENST00000494334 USP17L8P0C7I0 530 aa16.7■□□□□ 0.26
COL1A1-208ENST00000494334 PHKA1P46020 1223 aa16.7■□□□□ 0.26
COL1A1-208ENST00000494334 HIRAP54198 1017 aaPredicted RBP16.7■□□□□ 0.26
COL1A1-208ENST00000494334 ZNF280AP59817 542 aaPredicted RBP16.7■□□□□ 0.26
COL1A1-208ENST00000494334 C1QTNF8P60827 252 aa16.7■□□□□ 0.26
COL1A1-208ENST00000494334 FKBP1AP62942 108 aaKnown RBP16.7■□□□□ 0.26
COL1A1-208ENST00000494334 SAMD7Q7Z3H4 446 aa16.7■□□□□ 0.26
COL1A1-208ENST00000494334 EXOC6Q8TAG9 804 aa16.7■□□□□ 0.26
COL1A1-208ENST00000494334 RHPN1Q8TCX5 695 aa16.7■□□□□ 0.26
COL1A1-208ENST00000494334 TRPM4Q8TD43 1214 aa16.7■□□□□ 0.26
COL1A1-208ENST00000494334 EGFRP00533 1210 aa16.69■□□□□ 0.26
COL1A1-208ENST00000494334 CHAF1AQ13111 956 aaPredicted RBP16.69■□□□□ 0.26
COL1A1-208ENST00000494334 RBM26Q5T8P6 1007 aaKnown RBP16.69■□□□□ 0.26
COL1A1-208ENST00000494334 LDHDQ86WU2 507 aa16.69■□□□□ 0.26
COL1A1-208ENST00000494334 KIAA0825Q8IV33 1275 aa16.69■□□□□ 0.26
COL1A1-208ENST00000494334 EAF2Q96CJ1 260 aaPredicted RBP16.69■□□□□ 0.26
COL1A1-208ENST00000494334 GNL3LQ9NVN8 582 aaKnown RBP16.69■□□□□ 0.26
COL1A1-208ENST00000494334 CLEC11AQ9Y240 323 aa16.69■□□□□ 0.26
COL1A1-208ENST00000494334 PSME4Q14997 1843 aa16.68■□□□□ 0.26
COL1A1-208ENST00000494334 APBB1O00213 710 aa16.68■□□□□ 0.26
COL1A1-208ENST00000494334 ZBTB22O15209 634 aa16.68■□□□□ 0.26
COL1A1-208ENST00000494334 RAB11FIP3O75154 756 aa16.68■□□□□ 0.26
COL1A1-208ENST00000494334 TBC1D10BQ4KMP7 808 aaPredicted RBP16.68■□□□□ 0.26
COL1A1-208ENST00000494334 MFSD14BQ5SR56 506 aa16.68■□□□□ 0.26
COL1A1-208ENST00000494334 CHADLQ6NUI6 762 aa16.68■□□□□ 0.26
COL1A1-208ENST00000494334 SMC1BQ8NDV3 1235 aa16.68■□□□□ 0.26
COL1A1-208ENST00000494334 KIF1BPQ96EK5 621 aa16.68■□□□□ 0.26
COL1A1-208ENST00000494334 FSTL1Q12841 308 aa16.67■□□□□ 0.26
COL1A1-208ENST00000494334 AAMPQ13685 434 aa16.67■□□□□ 0.26
COL1A1-208ENST00000494334 GORABQ5T7V8 394 aa16.67■□□□□ 0.26
COL1A1-208ENST00000494334 OGFOD1Q8N543 542 aa16.67■□□□□ 0.26
COL1A1-208ENST00000494334 DBNDD2Q9BQY9 259 aa16.67■□□□□ 0.26
COL1A1-208ENST00000494334 CCDC8Q9H0W5 538 aaPredicted RBP16.67■□□□□ 0.26
COL1A1-208ENST00000494334 DCTPP1Q9H773 170 aa16.67■□□□□ 0.26
COL1A1-208ENST00000494334 IL1RAPL2Q9NP60 686 aa16.67■□□□□ 0.26
COL1A1-208ENST00000494334 MYOZ2Q9NPC6 264 aa16.67■□□□□ 0.26
COL1A1-208ENST00000494334 ZNF646O15015 1829 aaPredicted RBP16.66■□□□□ 0.26
COL1A1-208ENST00000494334 F8W031 263 aaPredicted RBP16.66■□□□□ 0.26
COL1A1-208ENST00000494334 SEMA3EO15041 775 aa16.66■□□□□ 0.26
COL1A1-208ENST00000494334 MMP14P50281 582 aa16.66■□□□□ 0.26
COL1A1-208ENST00000494334 IRX6P78412 446 aaPredicted RBP16.66■□□□□ 0.26
COL1A1-208ENST00000494334 GRIK5Q16478 980 aa16.66■□□□□ 0.26
COL1A1-208ENST00000494334 KIF4BQ2VIQ3 1234 aa16.66■□□□□ 0.26
COL1A1-208ENST00000494334 TBC1D22AQ8WUA7 517 aa16.66■□□□□ 0.26
COL1A1-208ENST00000494334 TLR7Q9NYK1 1049 aaKnown RBP16.66■□□□□ 0.26
COL1A1-208ENST00000494334 PGAP2Q9UHJ9 254 aa16.66■□□□□ 0.26
COL1A1-208ENST00000494334 DBNLQ9UJU6 430 aaKnown RBP16.66■□□□□ 0.26
COL1A1-208ENST00000494334 HDAC9Q9UKV0 1011 aa16.66■□□□□ 0.26
COL1A1-208ENST00000494334 DENND2AQ9ULE3 1009 aa16.66■□□□□ 0.26
COL1A1-208ENST00000494334 RASGRF1Q13972 1273 aa16.65■□□□□ 0.26
COL1A1-208ENST00000494334 MAP1SQ66K74 1059 aaPredicted RBP16.65■□□□□ 0.26
COL1A1-208ENST00000494334 AACSQ86V21 672 aa16.65■□□□□ 0.26
COL1A1-208ENST00000494334 CLASRPQ8N2M8 674 aaKnown RBP16.65■□□□□ 0.26
COL1A1-208ENST00000494334 WDR66Q8TBY9 1149 aa16.65■□□□□ 0.26
COL1A1-208ENST00000494334 ZC3H15Q8WU90 426 aaKnown RBP16.65■□□□□ 0.26
COL1A1-208ENST00000494334 COL1A1P02452 1464 aaPredicted RBP16.65■□□□□ 0.26
COL1A1-208ENST00000494334 ARID4AP29374 1257 aaPredicted RBP16.64■□□□□ 0.25
COL1A1-208ENST00000494334 CCDC158Q5M9N0 1113 aa16.64■□□□□ 0.25
COL1A1-208ENST00000494334 CNTROBQ8N137 903 aa16.64■□□□□ 0.25
COL1A1-208ENST00000494334 TTF2Q9UNY4 1162 aaKnown RBP16.64■□□□□ 0.25
COL1A1-208ENST00000494334 ADAMTSL1Q8N6G6 1762 aa16.64■□□□□ 0.25
COL1A1-208ENST00000494334 ARAP2Q8WZ64 1704 aa16.63■□□□□ 0.25
COL1A1-208ENST00000494334 UQCRFS1P1P0C7P4 283 aa16.63■□□□□ 0.25
COL1A1-208ENST00000494334 SCARF1Q14162 830 aa16.63■□□□□ 0.25
COL1A1-208ENST00000494334 TTC39AQ5SRH9 613 aa16.63■□□□□ 0.25
COL1A1-208ENST00000494334 LRRCC1Q9C099 1032 aa16.63■□□□□ 0.25
COL1A1-208ENST00000494334 HMG20BQ9P0W2 317 aa16.63■□□□□ 0.25
COL1A1-208ENST00000494334 WNT10BO00744 389 aa16.62■□□□□ 0.25
COL1A1-208ENST00000494334 SMARCA5O60264 1052 aaPredicted RBP16.62■□□□□ 0.25
COL1A1-208ENST00000494334 ITGBL1O95965 494 aaPredicted RBP16.62■□□□□ 0.25
COL1A1-208ENST00000494334 MCAMP43121 646 aa16.62■□□□□ 0.25
COL1A1-208ENST00000494334 HDAC1Q13547 482 aaPredicted RBP16.62■□□□□ 0.25
COL1A1-208ENST00000494334 NBPF9Q3BBW0 867 aa16.62■□□□□ 0.25
COL1A1-208ENST00000494334 ZBED3Q96IU2 234 aaPredicted RBP16.62■□□□□ 0.25
COL1A1-208ENST00000494334 ZNF512BQ96KM6 892 aaPredicted RBP16.62■□□□□ 0.25
COL1A1-208ENST00000494334 BCL11AQ9H165 835 aa16.62■□□□□ 0.25
COL1A1-208ENST00000494334 SUGT1Q9Y2Z0 365 aa16.62■□□□□ 0.25
COL1A1-208ENST00000494334 PCDHAC2Q9Y5I4 1007 aa16.62■□□□□ 0.25
COL1A1-208ENST00000494334 ASTN2O75129 1339 aaPredicted RBP16.62■□□□□ 0.25
COL1A1-208ENST00000494334 PDS5AQ29RF7 1337 aaKnown RBP16.62■□□□□ 0.25
COL1A1-208ENST00000494334 SALL1Q9NSC2 1324 aa16.62■□□□□ 0.25
COL1A1-208ENST00000494334 CFAP100Q494V2 611 aa16.61■□□□□ 0.25
COL1A1-208ENST00000494334 PI16Q6UXB8 463 aa16.61■□□□□ 0.25
COL1A1-208ENST00000494334 SPATA5Q8NB90 893 aa16.61■□□□□ 0.25
COL1A1-208ENST00000494334 MTMR14Q8NCE2 650 aa16.61■□□□□ 0.25
COL1A1-208ENST00000494334 IFIT2P09913 472 aaKnown RBP16.6■□□□□ 0.25
COL1A1-208ENST00000494334 PRDX5P30044 214 aa16.6■□□□□ 0.25
COL1A1-208ENST00000494334 DLGAP5Q15398 846 aa16.6■□□□□ 0.25
COL1A1-208ENST00000494334 MRIQ9BWK5 157 aa16.6■□□□□ 0.25
COL1A1-208ENST00000494334 SERPINA10Q9UK55 444 aa16.6■□□□□ 0.25
COL1A1-208ENST00000494334 CRKP46108 304 aa16.59■□□□□ 0.25
COL1A1-208ENST00000494334 RBM5P52756 815 aaKnown RBP eCLIP16.59■□□□□ 0.25
COL1A1-208ENST00000494334 HDLBPQ00341 1268 aaKnown RBP16.59■□□□□ 0.25
COL1A1-208ENST00000494334 ANGEL2Q5VTE6 544 aaKnown RBP16.59■□□□□ 0.25
COL1A1-208ENST00000494334 CDC37L1Q7L3B6 337 aa16.59■□□□□ 0.25
COL1A1-208ENST00000494334 ZGPATQ8N5A5 531 aaKnown RBP16.59■□□□□ 0.25
COL1A1-208ENST00000494334 DCPSQ96C86 337 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms