RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 DCAF8Q5TAQ9 597 aa14.38□□□□□ -0.11
CTSA-209ENST00000493522 CEP85Q6P2H3 762 aa14.38□□□□□ -0.11
CTSA-209ENST00000493522 DCPSQ96C86 337 aaKnown RBP14.38□□□□□ -0.11
CTSA-209ENST00000493522 ZC3H12CQ9C0D7 883 aaKnown RBP14.38□□□□□ -0.11
CTSA-209ENST00000493522 MCOLN1Q9GZU1 580 aa14.38□□□□□ -0.11
CTSA-209ENST00000493522 COPRSQ9NQ92 184 aa14.38□□□□□ -0.11
CTSA-209ENST00000493522 ZBTB40Q9NUA8 1239 aa14.38□□□□□ -0.11
CTSA-209ENST00000493522 LEMD3Q9Y2U8 911 aa14.38□□□□□ -0.11
CTSA-209ENST00000493522 RIPOR2Q9Y4F9 1068 aa14.38□□□□□ -0.11
CTSA-209ENST00000493522 WTIPA6NIX2 430 aaPredicted RBP14.37□□□□□ -0.11
CTSA-209ENST00000493522 CIAO1O76071 339 aa14.37□□□□□ -0.11
CTSA-209ENST00000493522 ATP8B2P98198 1209 aa14.37□□□□□ -0.11
CTSA-209ENST00000493522 C2orf69Q8N8R5 385 aa14.37□□□□□ -0.11
CTSA-209ENST00000493522 GBA2Q9HCG7 927 aaPredicted RBP14.37□□□□□ -0.11
CTSA-209ENST00000493522 SNAP23O00161 211 aa14.36□□□□□ -0.11
CTSA-209ENST00000493522 KLRK1P26718 216 aa14.36□□□□□ -0.11
CTSA-209ENST00000493522 OS9Q13438 667 aaPredicted RBP14.36□□□□□ -0.11
CTSA-209ENST00000493522 DGKZQ13574 1117 aa14.36□□□□□ -0.11
CTSA-209ENST00000493522 POLA2Q14181 598 aa14.36□□□□□ -0.11
CTSA-209ENST00000493522 DOK7Q18PE1 504 aa14.36□□□□□ -0.11
CTSA-209ENST00000493522 RGMBQ6NW40 437 aa14.36□□□□□ -0.11
CTSA-209ENST00000493522 ATG9AQ7Z3C6 839 aa14.36□□□□□ -0.11
CTSA-209ENST00000493522 SSH3Q8TE77 659 aa14.36□□□□□ -0.11
CTSA-209ENST00000493522 FBXO3Q9UK99 471 aa14.36□□□□□ -0.11
CTSA-209ENST00000493522 EGFRP00533 1210 aa14.35□□□□□ -0.11
CTSA-209ENST00000493522 IL15P40933 162 aaPredicted RBP14.35□□□□□ -0.11
CTSA-209ENST00000493522 KIF4BQ2VIQ3 1234 aa14.35□□□□□ -0.11
CTSA-209ENST00000493522 RBM26Q5T8P6 1007 aaKnown RBP14.35□□□□□ -0.11
CTSA-209ENST00000493522 VGLL2Q8N8G2 317 aa14.35□□□□□ -0.11
CTSA-209ENST00000493522 CCDC102AQ96A19 550 aa14.35□□□□□ -0.11
CTSA-209ENST00000493522 SAGE1Q9NXZ1 904 aa14.35□□□□□ -0.11
CTSA-209ENST00000493522 ZNF609O15014 1411 aa14.34□□□□□ -0.11
CTSA-209ENST00000493522 ADM5C9JUS6 153 aa14.34□□□□□ -0.11
CTSA-209ENST00000493522 HMMRO75330 724 aa14.34□□□□□ -0.11
CTSA-209ENST00000493522 PDE8BO95263 885 aa14.34□□□□□ -0.11
CTSA-209ENST00000493522 SLC34A2O95436 690 aa14.34□□□□□ -0.11
CTSA-209ENST00000493522 ZNF157P51786 506 aaPredicted RBP14.34□□□□□ -0.11
CTSA-209ENST00000493522 G3BP1Q13283 466 aaKnown RBP eCLIP14.34□□□□□ -0.11
CTSA-209ENST00000493522 UBE4AQ14139 1066 aa14.34□□□□□ -0.11
CTSA-209ENST00000493522 DLK2Q6UY11 383 aa14.34□□□□□ -0.11
CTSA-209ENST00000493522 SULF1Q8IWU6 871 aa14.34□□□□□ -0.11
CTSA-209ENST00000493522 RPAP2Q8IXW5 612 aaPredicted RBP14.34□□□□□ -0.11
CTSA-209ENST00000493522 ZIC5Q96T25 663 aa14.34□□□□□ -0.11
CTSA-209ENST00000493522 CASP8AP2Q9UKL3 1982 aa14.33□□□□□ -0.12
CTSA-209ENST00000493522 FAM155AB1AL88 458 aaPredicted RBP14.33□□□□□ -0.12
CTSA-209ENST00000493522 SURF6O75683 361 aaKnown RBP14.33□□□□□ -0.12
CTSA-209ENST00000493522 VIL1P09327 827 aaKnown RBP14.33□□□□□ -0.12
CTSA-209ENST00000493522 PUM3Q15397 648 aaKnown RBP14.33□□□□□ -0.12
CTSA-209ENST00000493522 ZNF804AQ7Z570 1209 aa14.33□□□□□ -0.12
CTSA-209ENST00000493522 TXNRD3Q86VQ6 643 aa14.33□□□□□ -0.12
CTSA-209ENST00000493522 KCNQ5Q9NR82 932 aa14.33□□□□□ -0.12
CTSA-209ENST00000493522 GGA3Q9NZ52 723 aa14.33□□□□□ -0.12
CTSA-209ENST00000493522 CEP126Q9P2H0 1117 aa14.33□□□□□ -0.12
CTSA-209ENST00000493522 SLC5A1P13866 664 aa14.32□□□□□ -0.12
CTSA-209ENST00000493522 IRX6P78412 446 aaPredicted RBP14.32□□□□□ -0.12
CTSA-209ENST00000493522 ATP2B3Q16720 1220 aa14.32□□□□□ -0.12
CTSA-209ENST00000493522 IRS2Q9Y4H2 1338 aa14.32□□□□□ -0.12
CTSA-209ENST00000493522 ECM29Q5VYK3 1845 aa14.31□□□□□ -0.12
CTSA-209ENST00000493522 IFIT1P09914 478 aaKnown RBP14.31□□□□□ -0.12
CTSA-209ENST00000493522 KIF23Q02241 960 aaPredicted RBP14.31□□□□□ -0.12
CTSA-209ENST00000493522 TFCP2Q12800 502 aa14.31□□□□□ -0.12
CTSA-209ENST00000493522 C15orf52Q6ZUT6 534 aaKnown RBP14.31□□□□□ -0.12
CTSA-209ENST00000493522 AGBL3Q8NEM8 1001 aa14.31□□□□□ -0.12
CTSA-209ENST00000493522 FBXW7Q969H0 707 aa14.31□□□□□ -0.12
CTSA-209ENST00000493522 COA1Q9GZY4 146 aa14.31□□□□□ -0.12
CTSA-209ENST00000493522 EXOC6BQ9Y2D4 811 aa14.31□□□□□ -0.12
CTSA-209ENST00000493522 SLC10A3P09131 477 aa14.3□□□□□ -0.12
CTSA-209ENST00000493522 GYG1P46976 350 aa14.3□□□□□ -0.12
CTSA-209ENST00000493522 RSBN1LQ6PCB5 846 aaPredicted RBP14.3□□□□□ -0.12
CTSA-209ENST00000493522 VPS37DQ86XT2 251 aa14.3□□□□□ -0.12
CTSA-209ENST00000493522 SIRT2Q8IXJ6 389 aa14.3□□□□□ -0.12
CTSA-209ENST00000493522 REM2Q8IYK8 340 aaPredicted RBP14.3□□□□□ -0.12
CTSA-209ENST00000493522 LPIN2Q92539 896 aa14.3□□□□□ -0.12
CTSA-209ENST00000493522 CDCA5Q96FF9 252 aa14.3□□□□□ -0.12
CTSA-209ENST00000493522 TRPA1O75762 1119 aa14.29□□□□□ -0.12
CTSA-209ENST00000493522 CENPBP07199 599 aaPredicted RBP14.29□□□□□ -0.12
CTSA-209ENST00000493522 FGFR2P21802 821 aa14.29□□□□□ -0.12
CTSA-209ENST00000493522 ZNF280AP59817 542 aaPredicted RBP14.29□□□□□ -0.12
CTSA-209ENST00000493522 CAVIN4Q5BKX8 364 aa14.29□□□□□ -0.12
CTSA-209ENST00000493522 PODNQ7Z5L7 613 aa14.29□□□□□ -0.12
CTSA-209ENST00000493522 EXOC6Q8TAG9 804 aa14.29□□□□□ -0.12
CTSA-209ENST00000493522 CD209Q9NNX6 404 aa14.29□□□□□ -0.12
CTSA-209ENST00000493522 RNF186Q9NXI6 227 aa14.29□□□□□ -0.12
CTSA-209ENST00000493522 AKAP2Q9Y2D5 859 aa14.29□□□□□ -0.12
CTSA-209ENST00000493522 NOP58Q9Y2X3 529 aaKnown RBP14.29□□□□□ -0.12
CTSA-209ENST00000493522 TNRC18O15417 2968 aaPredicted RBP14.29□□□□□ -0.12
CTSA-209ENST00000493522 MYO5AQ9Y4I1 1855 aaKnown RBP14.29□□□□□ -0.12
CTSA-209ENST00000493522 A0A1B0GUL7 405 aa14.28□□□□□ -0.12
CTSA-209ENST00000493522 APBB1O00213 710 aa14.28□□□□□ -0.12
CTSA-209ENST00000493522 ASTN2O75129 1339 aaPredicted RBP14.28□□□□□ -0.12
CTSA-209ENST00000493522 SASH1O94885 1247 aa14.28□□□□□ -0.12
CTSA-209ENST00000493522 HIBADHP31937 336 aaKnown RBP14.28□□□□□ -0.12
CTSA-209ENST00000493522 FKBP1BP68106 108 aa14.28□□□□□ -0.12
CTSA-209ENST00000493522 SCARF1Q14162 830 aa14.28□□□□□ -0.12
CTSA-209ENST00000493522 HSP90AB4PQ58FF6 505 aa14.28□□□□□ -0.12
CTSA-209ENST00000493522 ANGEL2Q5VTE6 544 aaKnown RBP14.28□□□□□ -0.12
CTSA-209ENST00000493522 MAST2Q6P0Q8 1798 aa14.28□□□□□ -0.12
CTSA-209ENST00000493522 ERC1Q8IUD2 1116 aa14.28□□□□□ -0.12
CTSA-209ENST00000493522 PITPNM2Q9BZ72 1349 aa14.28□□□□□ -0.12
CTSA-209ENST00000493522 AKAP11Q9UKA4 1901 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms