RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 IFNL1Q8IU54 200 aa17.5■□□□□ 0.39
SAMM50-204ENST00000493161 LINS1Q8NG48 757 aa17.5■□□□□ 0.39
SAMM50-204ENST00000493161 SLC10A4Q96EP9 437 aa17.5■□□□□ 0.39
SAMM50-204ENST00000493161 PCDH10Q9P2E7 1040 aa17.5■□□□□ 0.39
SAMM50-204ENST00000493161 IGF2BP3O00425 579 aaKnown RBP eCLIP17.49■□□□□ 0.39
SAMM50-204ENST00000493161 MAP3K11Q16584 847 aa17.49■□□□□ 0.39
SAMM50-204ENST00000493161 MTMR14Q8NCE2 650 aa17.49■□□□□ 0.39
SAMM50-204ENST00000493161 WNK4Q96J92 1243 aa17.49■□□□□ 0.39
SAMM50-204ENST00000493161 PRMT6Q96LA8 375 aaPredicted RBP17.49■□□□□ 0.39
SAMM50-204ENST00000493161 MYH16Q9H6N6 1097 aa17.49■□□□□ 0.39
SAMM50-204ENST00000493161 A0A1B0GUL6 1792 aa17.48■□□□□ 0.39
SAMM50-204ENST00000493161 F6X3S4 739 aa17.48■□□□□ 0.39
SAMM50-204ENST00000493161 CFAP100Q494V2 611 aa17.48■□□□□ 0.39
SAMM50-204ENST00000493161 EPHA10Q5JZY3 1008 aa17.48■□□□□ 0.39
SAMM50-204ENST00000493161 NBPF12Q5TAG4 269 aaPredicted RBP17.48■□□□□ 0.39
SAMM50-204ENST00000493161 C15orf52Q6ZUT6 534 aaKnown RBP17.48■□□□□ 0.39
SAMM50-204ENST00000493161 ZNF594Q96JF6 807 aaPredicted RBP17.48■□□□□ 0.39
SAMM50-204ENST00000493161 HTTP42858 3142 aa17.48■□□□□ 0.39
SAMM50-204ENST00000493161 COL1A1P02452 1464 aaPredicted RBP17.48■□□□□ 0.39
SAMM50-204ENST00000493161 FANCIQ9NVI1 1328 aa17.47■□□□□ 0.39
SAMM50-204ENST00000493161 SPDYE2BA6NHP3 402 aa17.47■□□□□ 0.39
SAMM50-204ENST00000493161 VAMP4O75379 141 aa17.47■□□□□ 0.39
SAMM50-204ENST00000493161 SPDYE6P0CI01 402 aa17.47■□□□□ 0.39
SAMM50-204ENST00000493161 IL1R1P14778 569 aa17.47■□□□□ 0.39
SAMM50-204ENST00000493161 GJA5P36382 358 aa17.47■□□□□ 0.39
SAMM50-204ENST00000493161 CHMP3Q9Y3E7 222 aa17.47■□□□□ 0.39
SAMM50-204ENST00000493161 MANSC4A6NHS7 340 aaPredicted RBP17.46■□□□□ 0.39
SAMM50-204ENST00000493161 PLIN1O60240 522 aa17.46■□□□□ 0.39
SAMM50-204ENST00000493161 IFIT5Q13325 482 aaKnown RBP17.46■□□□□ 0.39
SAMM50-204ENST00000493161 OTOP1Q7RTM1 612 aa17.46■□□□□ 0.39
SAMM50-204ENST00000493161 VEZTQ9HBM0 779 aa17.46■□□□□ 0.39
SAMM50-204ENST00000493161 TRIM17Q9Y577 477 aa17.46■□□□□ 0.39
SAMM50-204ENST00000493161 IL16Q14005 1332 aa17.46■□□□□ 0.38
SAMM50-204ENST00000493161 ECM29Q5VYK3 1845 aa17.45■□□□□ 0.38
SAMM50-204ENST00000493161 PPP1R12BO60237 982 aaPredicted RBP17.45■□□□□ 0.38
SAMM50-204ENST00000493161 USP2O75604 605 aaPredicted RBP17.45■□□□□ 0.38
SAMM50-204ENST00000493161 ALDH1A1P00352 501 aa17.45■□□□□ 0.38
SAMM50-204ENST00000493161 ZBTB48P10074 688 aaPredicted RBP17.45■□□□□ 0.38
SAMM50-204ENST00000493161 CAP1Q01518 475 aa17.45■□□□□ 0.38
SAMM50-204ENST00000493161 BEND3Q5T5X7 828 aa17.45■□□□□ 0.38
SAMM50-204ENST00000493161 LMBR1LQ6UX01 489 aa17.45■□□□□ 0.38
SAMM50-204ENST00000493161 ZNF804AQ7Z570 1209 aa17.45■□□□□ 0.38
SAMM50-204ENST00000493161 SALL2Q9Y467 1007 aaPredicted RBP17.45■□□□□ 0.38
SAMM50-204ENST00000493161 PPP2R3BQ9Y5P8 575 aa17.45■□□□□ 0.38
SAMM50-204ENST00000493161 POTEFA5A3E0 1075 aa17.44■□□□□ 0.38
SAMM50-204ENST00000493161 RBM5P52756 815 aaKnown RBP eCLIP17.44■□□□□ 0.38
SAMM50-204ENST00000493161 INHBEP58166 350 aa17.44■□□□□ 0.38
SAMM50-204ENST00000493161 EXOSC9Q06265 439 aaKnown RBP17.44■□□□□ 0.38
SAMM50-204ENST00000493161 RASA3Q14644 834 aa17.44■□□□□ 0.38
SAMM50-204ENST00000493161 PTPN18Q99952 460 aa17.44■□□□□ 0.38
SAMM50-204ENST00000493161 MYO1BO43795 1136 aa17.43■□□□□ 0.38
SAMM50-204ENST00000493161 CRHR2Q13324 411 aa17.43■□□□□ 0.38
SAMM50-204ENST00000493161 SUPT20HL1Q3ZLR7 823 aa17.43■□□□□ 0.38
SAMM50-204ENST00000493161 CDAN1Q8IWY9 1227 aa17.43■□□□□ 0.38
SAMM50-204ENST00000493161 CD99L2Q8TCZ2 262 aa17.43■□□□□ 0.38
SAMM50-204ENST00000493161 LAMB1P07942 1786 aa17.43■□□□□ 0.38
SAMM50-204ENST00000493161 FKBP1AP62942 108 aaKnown RBP17.42■□□□□ 0.38
SAMM50-204ENST00000493161 LDHAL6AQ6ZMR3 332 aa17.42■□□□□ 0.38
SAMM50-204ENST00000493161 SPINK5Q9NQ38 1064 aaPredicted RBP17.42■□□□□ 0.38
SAMM50-204ENST00000493161 MKI67P46013 3256 aaKnown RBP17.41■□□□□ 0.38
SAMM50-204ENST00000493161 CENPFP49454 3210 aa17.41■□□□□ 0.38
SAMM50-204ENST00000493161 GYG1P46976 350 aa17.41■□□□□ 0.38
SAMM50-204ENST00000493161 IREB2P48200 963 aaKnown RBP17.41■□□□□ 0.38
SAMM50-204ENST00000493161 CNKSR2Q8WXI2 1034 aa17.41■□□□□ 0.38
SAMM50-204ENST00000493161 TDRD3Q9H7E2 651 aaKnown RBP17.41■□□□□ 0.38
SAMM50-204ENST00000493161 ZNF70Q9UC06 446 aaPredicted RBP17.41■□□□□ 0.38
SAMM50-204ENST00000493161 PTPN22Q9Y2R2 807 aa17.41■□□□□ 0.38
SAMM50-204ENST00000493161 CCDC57Q2TAC2 916 aa17.4■□□□□ 0.38
SAMM50-204ENST00000493161 TDRD7Q8NHU6 1098 aaKnown RBP17.4■□□□□ 0.38
SAMM50-204ENST00000493161 PUS3Q9BZE2 481 aaKnown RBP17.4■□□□□ 0.38
SAMM50-204ENST00000493161 ELP3Q9H9T3 547 aa17.4■□□□□ 0.38
SAMM50-204ENST00000493161 CNNM1Q9NRU3 951 aa17.4■□□□□ 0.38
SAMM50-204ENST00000493161 OTOFQ9HC10 1997 aa17.4■□□□□ 0.38
SAMM50-204ENST00000493161 FAM205AQ6ZU69 1335 aa17.4■□□□□ 0.38
SAMM50-204ENST00000493161 UNCXA6NJT0 531 aa17.39■□□□□ 0.37
SAMM50-204ENST00000493161 GRM8O00222 908 aa17.39■□□□□ 0.37
SAMM50-204ENST00000493161 GRIK5Q16478 980 aa17.39■□□□□ 0.37
SAMM50-204ENST00000493161 SPDYE2Q495Y8 402 aa17.39■□□□□ 0.37
SAMM50-204ENST00000493161 TAF7LQ5H9L4 462 aa17.39■□□□□ 0.37
SAMM50-204ENST00000493161 MFSD14BQ5SR56 506 aa17.39■□□□□ 0.37
SAMM50-204ENST00000493161 ANKRD13AQ8IZ07 590 aa17.39■□□□□ 0.37
SAMM50-204ENST00000493161 OPTNQ96CV9 577 aa17.39■□□□□ 0.37
SAMM50-204ENST00000493161 TEPSINQ96N21 525 aa17.39■□□□□ 0.37
SAMM50-204ENST00000493161 TTF2Q9UNY4 1162 aaKnown RBP17.39■□□□□ 0.37
SAMM50-204ENST00000493161 TESPA1A2RU30 521 aaPredicted RBP17.38■□□□□ 0.37
SAMM50-204ENST00000493161 TCP10L2B9ZVM9 353 aa17.38■□□□□ 0.37
SAMM50-204ENST00000493161 NCBP3Q53F19 620 aaKnown RBP17.38■□□□□ 0.37
SAMM50-204ENST00000493161 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.38■□□□□ 0.37
SAMM50-204ENST00000493161 ERO1AQ96HE7 468 aa17.38■□□□□ 0.37
SAMM50-204ENST00000493161 KAZALD1Q96I82 304 aa17.38■□□□□ 0.37
SAMM50-204ENST00000493161 MS4A4AQ96JQ5 239 aa17.38■□□□□ 0.37
SAMM50-204ENST00000493161 FAM84BQ96KN1 310 aaPredicted RBP17.38■□□□□ 0.37
SAMM50-204ENST00000493161 CACNA1FO60840 1977 aa17.38■□□□□ 0.37
SAMM50-204ENST00000493161 WDR63Q8IWG1 891 aa17.37■□□□□ 0.37
SAMM50-204ENST00000493161 DZIP1LQ8IYY4 767 aaKnown RBP17.37■□□□□ 0.37
SAMM50-204ENST00000493161 SUCLG2Q96I99 432 aa17.37■□□□□ 0.37
SAMM50-204ENST00000493161 TMEM39BQ9GZU3 492 aa17.37■□□□□ 0.37
SAMM50-204ENST00000493161 EFCC1Q9HA90 598 aa17.37■□□□□ 0.37
SAMM50-204ENST00000493161 SERPINA10Q9UK55 444 aa17.37■□□□□ 0.37
SAMM50-204ENST00000493161 EN2P19622 333 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms