RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 NUCB2P80303 420 aa27.34■■□□□ 1.97
USF3-203ENST00000491165 BCS1LQ9Y276 419 aa27.34■■□□□ 1.97
USF3-203ENST00000491165 C6orf229H3BNL8 230 aa27.34■■□□□ 1.97
USF3-203ENST00000491165 ST18O60284 1047 aa27.34■■□□□ 1.97
USF3-203ENST00000491165 ATP2B4P23634 1241 aa27.34■■□□□ 1.97
USF3-203ENST00000491165 GORABQ5T7V8 394 aa27.34■■□□□ 1.97
USF3-203ENST00000491165 ARFGEF1Q9Y6D6 1849 aa27.33■■□□□ 1.97
USF3-203ENST00000491165 FER1L6Q2WGJ9 1857 aa27.33■■□□□ 1.97
USF3-203ENST00000491165 ERC2O15083 957 aa27.32■■□□□ 1.96
USF3-203ENST00000491165 ATP5JP18859 108 aa27.32■■□□□ 1.96
USF3-203ENST00000491165 EDC3Q96F86 508 aaKnown RBP27.32■■□□□ 1.96
USF3-203ENST00000491165 IQSEC3Q9UPP2 1182 aaPredicted RBP27.32■■□□□ 1.96
USF3-203ENST00000491165 AOX1Q06278 1338 aa27.32■■□□□ 1.96
USF3-203ENST00000491165 MCAMP43121 646 aa27.32■■□□□ 1.96
USF3-203ENST00000491165 GAS2L3Q86XJ1 694 aa27.32■■□□□ 1.96
USF3-203ENST00000491165 CHD4Q14839 1912 aa27.31■■□□□ 1.96
USF3-203ENST00000491165 CCDC158Q5M9N0 1113 aa27.31■■□□□ 1.96
USF3-203ENST00000491165 GPATCH3Q96I76 525 aa27.31■■□□□ 1.96
USF3-203ENST00000491165 AK9Q5TCS8 1911 aa27.31■■□□□ 1.96
USF3-203ENST00000491165 MYO5AQ9Y4I1 1855 aaKnown RBP27.31■■□□□ 1.96
USF3-203ENST00000491165 COL1A1P02452 1464 aaPredicted RBP27.31■■□□□ 1.96
USF3-203ENST00000491165 GLRX3O76003 335 aaKnown RBP27.31■■□□□ 1.96
USF3-203ENST00000491165 TTC39AQ5SRH9 613 aa27.31■■□□□ 1.96
USF3-203ENST00000491165 FBXO33Q7Z6M2 555 aa27.31■■□□□ 1.96
USF3-203ENST00000491165 TMX4Q9H1E5 349 aaPredicted RBP27.31■■□□□ 1.96
USF3-203ENST00000491165 MYH13Q9UKX3 1938 aa27.31■■□□□ 1.96
USF3-203ENST00000491165 RIMBP2O15034 1052 aa27.3■■□□□ 1.96
USF3-203ENST00000491165 KLHL40Q2TBA0 621 aa27.3■■□□□ 1.96
USF3-203ENST00000491165 CWC22Q9HCG8 908 aaKnown RBP27.3■■□□□ 1.96
USF3-203ENST00000491165 ARID4AP29374 1257 aaPredicted RBP27.29■■□□□ 1.96
USF3-203ENST00000491165 CCDC93Q567U6 631 aa27.29■■□□□ 1.96
USF3-203ENST00000491165 RTFDC1Q9BY42 306 aaPredicted RBP27.29■■□□□ 1.96
USF3-203ENST00000491165 SNRKQ9NRH2 765 aa27.29■■□□□ 1.96
USF3-203ENST00000491165 MED23Q9ULK4 1368 aa27.29■■□□□ 1.96
USF3-203ENST00000491165 RASGRF1Q13972 1273 aa27.29■■□□□ 1.96
USF3-203ENST00000491165 C15orf52Q6ZUT6 534 aaKnown RBP27.28■■□□□ 1.96
USF3-203ENST00000491165 CYP2E1P05181 493 aaPredicted RBP27.28■■□□□ 1.96
USF3-203ENST00000491165 CAVIN4Q5BKX8 364 aa27.28■■□□□ 1.96
USF3-203ENST00000491165 CC2D2BQ6DHV5 1058 aa27.28■■□□□ 1.96
USF3-203ENST00000491165 DNAJC2Q99543 621 aaKnown RBP27.28■■□□□ 1.96
USF3-203ENST00000491165 DDX49Q9Y6V7 483 aaKnown RBP27.28■■□□□ 1.96
USF3-203ENST00000491165 HIBADHP31937 336 aaKnown RBP27.27■■□□□ 1.96
USF3-203ENST00000491165 CLCN1P35523 988 aa27.27■■□□□ 1.96
USF3-203ENST00000491165 ZNF512BQ96KM6 892 aaPredicted RBP27.26■■□□□ 1.96
USF3-203ENST00000491165 HAUS7Q99871 368 aa27.26■■□□□ 1.96
USF3-203ENST00000491165 WASHC4Q2M389 1173 aa27.26■■□□□ 1.95
USF3-203ENST00000491165 VPS37DQ86XT2 251 aa27.26■■□□□ 1.95
USF3-203ENST00000491165 HMG20BQ9P0W2 317 aa27.26■■□□□ 1.95
USF3-203ENST00000491165 COL4A5P29400 1685 aa27.26■■□□□ 1.95
USF3-203ENST00000491165 ZAP70P43403 619 aa27.25■■□□□ 1.95
USF3-203ENST00000491165 TRIM6-TRIM34B2RNG4 842 aa27.25■■□□□ 1.95
USF3-203ENST00000491165 FKBP4Q02790 459 aaKnown RBP eCLIP27.25■■□□□ 1.95
USF3-203ENST00000491165 RTKN2Q8IZC4 609 aa27.25■■□□□ 1.95
USF3-203ENST00000491165 NFKBIEO00221 500 aa27.24■■□□□ 1.95
USF3-203ENST00000491165 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.24■■□□□ 1.95
USF3-203ENST00000491165 SCN9AQ15858 1988 aa27.23■■□□□ 1.95
USF3-203ENST00000491165 AOC3Q16853 763 aa27.23■■□□□ 1.95
USF3-203ENST00000491165 MCTP1Q6DN14 999 aa27.23■■□□□ 1.95
USF3-203ENST00000491165 RILPL2Q969X0 211 aa27.23■■□□□ 1.95
USF3-203ENST00000491165 PSMD1Q99460 953 aa27.23■■□□□ 1.95
USF3-203ENST00000491165 CD209Q9NNX6 404 aa27.23■■□□□ 1.95
USF3-203ENST00000491165 JAG2Q9Y219 1238 aa27.23■■□□□ 1.95
USF3-203ENST00000491165 DOK7Q18PE1 504 aa27.23■■□□□ 1.95
USF3-203ENST00000491165 ZC3H12CQ9C0D7 883 aaKnown RBP27.23■■□□□ 1.95
USF3-203ENST00000491165 ZNF277Q9NRM2 450 aaPredicted RBP27.23■■□□□ 1.95
USF3-203ENST00000491165 GOLIM4O00461 696 aa27.22■■□□□ 1.95
USF3-203ENST00000491165 CHGBP05060 677 aa27.22■■□□□ 1.95
USF3-203ENST00000491165 SPATA5Q8NB90 893 aa27.22■■□□□ 1.95
USF3-203ENST00000491165 UQCRFS1P1P0C7P4 283 aa27.22■■□□□ 1.95
USF3-203ENST00000491165 YBX3P16989 372 aaKnown RBP eCLIP27.21■■□□□ 1.95
USF3-203ENST00000491165 SOGA3Q5TF21 947 aa27.21■■□□□ 1.95
USF3-203ENST00000491165 ZNF804AQ7Z570 1209 aa27.21■■□□□ 1.95
USF3-203ENST00000491165 TDRD7Q8NHU6 1098 aaKnown RBP27.21■■□□□ 1.95
USF3-203ENST00000491165 DBNDD1Q9H9R9 158 aa27.21■■□□□ 1.95
USF3-203ENST00000491165 PAG1Q9NWQ8 432 aa27.21■■□□□ 1.95
USF3-203ENST00000491165 CCDC88AQ3V6T2 1871 aa27.21■■□□□ 1.95
USF3-203ENST00000491165 PRELPP51888 382 aa27.2■■□□□ 1.95
USF3-203ENST00000491165 TRIM44Q96DX7 344 aaPredicted RBP27.2■■□□□ 1.95
USF3-203ENST00000491165 KIAA2012Q0VF49 1180 aa27.2■■□□□ 1.94
USF3-203ENST00000491165 ZGPATQ8N5A5 531 aaKnown RBP27.2■■□□□ 1.94
USF3-203ENST00000491165 DOCK2Q92608 1830 aa27.19■■□□□ 1.94
USF3-203ENST00000491165 IL1R1P14778 569 aa27.19■■□□□ 1.94
USF3-203ENST00000491165 RASSF7Q02833 373 aa27.19■■□□□ 1.94
USF3-203ENST00000491165 PKP1Q13835 747 aa27.19■■□□□ 1.94
USF3-203ENST00000491165 EYA3Q99504 573 aa27.19■■□□□ 1.94
USF3-203ENST00000491165 KCNQ5Q9NR82 932 aa27.19■■□□□ 1.94
USF3-203ENST00000491165 ZNF646O15015 1829 aaPredicted RBP27.19■■□□□ 1.94
USF3-203ENST00000491165 GRIPAP1Q4V328 841 aa27.19■■□□□ 1.94
USF3-203ENST00000491165 ESYT1Q9BSJ8 1104 aa27.18■■□□□ 1.94
USF3-203ENST00000491165 TAOK3Q9H2K8 898 aa27.18■■□□□ 1.94
USF3-203ENST00000491165 LMBRD1Q9NUN5 540 aa27.18■■□□□ 1.94
USF3-203ENST00000491165 GNL3LQ9NVN8 582 aaKnown RBP27.18■■□□□ 1.94
USF3-203ENST00000491165 ESPNB1AK53 854 aa27.17■■□□□ 1.94
USF3-203ENST00000491165 PPIP5K2O43314 1243 aa27.17■■□□□ 1.94
USF3-203ENST00000491165 CNTROBQ8N137 903 aa27.17■■□□□ 1.94
USF3-203ENST00000491165 PIH1D3Q9NQM4 214 aaKnown RBP27.17■■□□□ 1.94
USF3-203ENST00000491165 SLFNL1Q499Z3 407 aa27.17■■□□□ 1.94
USF3-203ENST00000491165 EVI5LQ96CN4 794 aa27.17■■□□□ 1.94
USF3-203ENST00000491165 MYH7P12883 1935 aa27.16■■□□□ 1.94
USF3-203ENST00000491165 SUPT20HQ8NEM7 779 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms