RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 POLR3DP05423 398 aaPredicted RBP8.52□□□□□ -1.04
NPHP3-208ENST00000490993 EPHA10Q5JZY3 1008 aa8.52□□□□□ -1.04
NPHP3-208ENST00000490993 MICU3Q86XE3 530 aa8.52□□□□□ -1.04
NPHP3-208ENST00000490993 ALG1Q9BT22 464 aa8.52□□□□□ -1.04
NPHP3-208ENST00000490993 MKNK2Q9HBH9 465 aa8.52□□□□□ -1.04
NPHP3-208ENST00000490993 ATP2B1P20020 1258 aa8.52□□□□□ -1.05
NPHP3-208ENST00000490993 UBE3CQ15386 1083 aa8.52□□□□□ -1.05
NPHP3-208ENST00000490993 SOGA3Q5TF21 947 aa8.52□□□□□ -1.05
NPHP3-208ENST00000490993 ZNF804AQ7Z570 1209 aa8.52□□□□□ -1.05
NPHP3-208ENST00000490993 NFAT5O94916 1531 aa8.52□□□□□ -1.05
NPHP3-208ENST00000490993 ABCC12Q96J65 1359 aa8.52□□□□□ -1.05
NPHP3-208ENST00000490993 PDE8BO95263 885 aa8.52□□□□□ -1.05
NPHP3-208ENST00000490993 SMC2O95347 1197 aa8.52□□□□□ -1.05
NPHP3-208ENST00000490993 HSPD1P10809 573 aaKnown RBP8.52□□□□□ -1.05
NPHP3-208ENST00000490993 RTN1Q16799 776 aa8.52□□□□□ -1.05
NPHP3-208ENST00000490993 ZNF444Q8N0Y2 327 aaPredicted RBP8.52□□□□□ -1.05
NPHP3-208ENST00000490993 EDC3Q96F86 508 aaKnown RBP8.52□□□□□ -1.05
NPHP3-208ENST00000490993 PFKFB2O60825 505 aa8.52□□□□□ -1.05
NPHP3-208ENST00000490993 BMP15O95972 392 aa8.52□□□□□ -1.05
NPHP3-208ENST00000490993 CRKLP46109 303 aaKnown RBP8.52□□□□□ -1.05
NPHP3-208ENST00000490993 TRAPPC3LQ5T215 181 aa8.52□□□□□ -1.05
NPHP3-208ENST00000490993 PYM1Q9BRP8 204 aaKnown RBP8.52□□□□□ -1.05
NPHP3-208ENST00000490993 PLA2G12BQ9BX93 195 aa8.52□□□□□ -1.05
NPHP3-208ENST00000490993 CCNL1Q9UK58 526 aaPredicted RBP8.52□□□□□ -1.05
NPHP3-208ENST00000490993 ZBTB1Q9Y2K1 713 aa8.52□□□□□ -1.05
NPHP3-208ENST00000490993 MBD4O95243 580 aa8.51□□□□□ -1.05
NPHP3-208ENST00000490993 ALDH8A1Q9H2A2 487 aaPredicted RBP8.51□□□□□ -1.05
NPHP3-208ENST00000490993 PXDNQ92626 1479 aa8.51□□□□□ -1.05
NPHP3-208ENST00000490993 MEGF6O75095 1541 aa8.51□□□□□ -1.05
NPHP3-208ENST00000490993 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.51□□□□□ -1.05
NPHP3-208ENST00000490993 PPP2R5BQ15173 497 aa8.51□□□□□ -1.05
NPHP3-208ENST00000490993 CERS3Q8IU89 383 aa8.51□□□□□ -1.05
NPHP3-208ENST00000490993 FAM200AQ8TCP9 573 aa8.51□□□□□ -1.05
NPHP3-208ENST00000490993 MRPS27Q92552 414 aaKnown RBP8.51□□□□□ -1.05
NPHP3-208ENST00000490993 SLC26A6Q9BXS9 759 aa8.51□□□□□ -1.05
NPHP3-208ENST00000490993 GREM2Q9H772 168 aa8.51□□□□□ -1.05
NPHP3-208ENST00000490993 TPCN1Q9ULQ1 816 aa8.51□□□□□ -1.05
NPHP3-208ENST00000490993 ANGEL1Q9UNK9 670 aaKnown RBP8.51□□□□□ -1.05
NPHP3-208ENST00000490993 NBPF26B4DH59 902 aa8.51□□□□□ -1.05
NPHP3-208ENST00000490993 GNPATO15228 680 aa8.51□□□□□ -1.05
NPHP3-208ENST00000490993 FOXO4P98177 505 aa8.51□□□□□ -1.05
NPHP3-208ENST00000490993 FAM98CQ17RN3 349 aaKnown RBP8.51□□□□□ -1.05
NPHP3-208ENST00000490993 FILIP1LQ4L180 1135 aa8.51□□□□□ -1.05
NPHP3-208ENST00000490993 NBPF14Q5TI25 921 aa8.51□□□□□ -1.05
NPHP3-208ENST00000490993 NBPF10Q6P3W6 841 aaKnown RBP8.51□□□□□ -1.05
NPHP3-208ENST00000490993 NBPF15Q8N660 670 aa8.51□□□□□ -1.05
NPHP3-208ENST00000490993 PATL2C9JE40 543 aaKnown RBP8.51□□□□□ -1.05
NPHP3-208ENST00000490993 KANK3Q6NY19 840 aa8.51□□□□□ -1.05
NPHP3-208ENST00000490993 PUS3Q9BZE2 481 aaKnown RBP8.51□□□□□ -1.05
NPHP3-208ENST00000490993 NDUFB9Q9Y6M9 179 aa8.51□□□□□ -1.05
NPHP3-208ENST00000490993 ZNF532Q9HCE3 1301 aa8.51□□□□□ -1.05
NPHP3-208ENST00000490993 CCDC102BQ68D86 513 aa8.5□□□□□ -1.05
NPHP3-208ENST00000490993 CREBRFQ8IUR6 639 aa8.5□□□□□ -1.05
NPHP3-208ENST00000490993 SALL3Q9BXA9 1300 aa8.5□□□□□ -1.05
NPHP3-208ENST00000490993 KDM6AO15550 1401 aaPredicted RBP8.5□□□□□ -1.05
NPHP3-208ENST00000490993 NEMFO60524 1076 aa8.5□□□□□ -1.05
NPHP3-208ENST00000490993 ADCK5Q3MIX3 580 aa8.5□□□□□ -1.05
NPHP3-208ENST00000490993 GIMAP6Q6P9H5 292 aa8.5□□□□□ -1.05
NPHP3-208ENST00000490993 CKAP2LQ8IYA6 745 aa8.5□□□□□ -1.05
NPHP3-208ENST00000490993 NALCNQ8IZF0 1738 aa8.5□□□□□ -1.05
NPHP3-208ENST00000490993 SPC24Q8NBT2 197 aa8.5□□□□□ -1.05
NPHP3-208ENST00000490993 DACT1Q9NYF0 836 aa8.5□□□□□ -1.05
NPHP3-208ENST00000490993 FSD2A1L4K1 749 aa8.5□□□□□ -1.05
NPHP3-208ENST00000490993 ADCY5O95622 1261 aa8.5□□□□□ -1.05
NPHP3-208ENST00000490993 IFIT1BQ5T764 474 aaKnown RBP8.5□□□□□ -1.05
NPHP3-208ENST00000490993 RBM28Q9NW13 759 aaKnown RBP8.5□□□□□ -1.05
NPHP3-208ENST00000490993 MTMR6Q9Y217 621 aa8.5□□□□□ -1.05
NPHP3-208ENST00000490993 CYP19A1P11511 503 aaPredicted RBP8.5□□□□□ -1.05
NPHP3-208ENST00000490993 PLCG2P16885 1265 aa8.5□□□□□ -1.05
NPHP3-208ENST00000490993 GNAQP50148 359 aa8.5□□□□□ -1.05
NPHP3-208ENST00000490993 KAT14Q9H8E8 782 aa8.5□□□□□ -1.05
NPHP3-208ENST00000490993 USP25Q9UHP3 1055 aa8.5□□□□□ -1.05
NPHP3-208ENST00000490993 R3HCC1Q9Y3T6 440 aaKnown RBP8.5□□□□□ -1.05
NPHP3-208ENST00000490993 ZNF142P52746 1687 aaPredicted RBP8.5□□□□□ -1.05
NPHP3-208ENST00000490993 TSPY2A6NKD2 308 aa8.5□□□□□ -1.05
NPHP3-208ENST00000490993 SERPINC1P01008 464 aa8.5□□□□□ -1.05
NPHP3-208ENST00000490993 ZNF165P49910 485 aa8.5□□□□□ -1.05
NPHP3-208ENST00000490993 TSGA10IPQ3SY00 556 aa8.5□□□□□ -1.05
NPHP3-208ENST00000490993 MTERF4Q7Z6M4 381 aaKnown RBP8.5□□□□□ -1.05
NPHP3-208ENST00000490993 ZNF589Q86UQ0 364 aaPredicted RBP8.5□□□□□ -1.05
NPHP3-208ENST00000490993 CCDC12Q8WUD4 166 aaPredicted RBP8.5□□□□□ -1.05
NPHP3-208ENST00000490993 PANK2Q9BZ23 570 aa8.5□□□□□ -1.05
NPHP3-208ENST00000490993 USP21Q9UK80 565 aa8.5□□□□□ -1.05
NPHP3-208ENST00000490993 CHD2O14647 1828 aaKnown RBP8.49□□□□□ -1.05
NPHP3-208ENST00000490993 HIBADHP31937 336 aaKnown RBP8.49□□□□□ -1.05
NPHP3-208ENST00000490993 CLEC4GQ6UXB4 293 aa8.49□□□□□ -1.05
NPHP3-208ENST00000490993 CHST3Q7LGC8 479 aa8.49□□□□□ -1.05
NPHP3-208ENST00000490993 TTLL11Q8NHH1 800 aa8.49□□□□□ -1.05
NPHP3-208ENST00000490993 SEC62Q99442 399 aaKnown RBP8.49□□□□□ -1.05
NPHP3-208ENST00000490993 SPTLC2O15270 562 aa8.49□□□□□ -1.05
NPHP3-208ENST00000490993 RAD21O60216 631 aa8.49□□□□□ -1.05
NPHP3-208ENST00000490993 CLCN1P35523 988 aa8.49□□□□□ -1.05
NPHP3-208ENST00000490993 PPP4R3BQ5MIZ7 849 aa8.49□□□□□ -1.05
NPHP3-208ENST00000490993 RBM17Q96I25 401 aaKnown RBP8.49□□□□□ -1.05
NPHP3-208ENST00000490993 SEC63Q9UGP8 760 aaKnown RBP8.49□□□□□ -1.05
NPHP3-208ENST00000490993 SEMA3EO15041 775 aa8.49□□□□□ -1.05
NPHP3-208ENST00000490993 STIM1Q13586 685 aa8.49□□□□□ -1.05
NPHP3-208ENST00000490993 PKP1Q13835 747 aa8.49□□□□□ -1.05
NPHP3-208ENST00000490993 TTC14Q96N46 770 aa8.49□□□□□ -1.05
NPHP3-208ENST00000490993 MAST3O60307 1309 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms