RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 UBASH3BQ8TF42 649 aa7.51□□□□□ -1.21
HMGN1-218ENST00000490032 CEP41Q9BYV8 373 aa7.51□□□□□ -1.21
HMGN1-218ENST00000490032 SOX17Q9H6I2 414 aaPredicted RBP7.51□□□□□ -1.21
HMGN1-218ENST00000490032 A0A1W2PP55 124 aa7.5□□□□□ -1.21
HMGN1-218ENST00000490032 BRD1O95696 1058 aa7.5□□□□□ -1.21
HMGN1-218ENST00000490032 ARL4DP49703 201 aa7.5□□□□□ -1.21
HMGN1-218ENST00000490032 IKBKEQ14164 716 aa7.5□□□□□ -1.21
HMGN1-218ENST00000490032 UVSSAQ2YD98 709 aa7.5□□□□□ -1.21
HMGN1-218ENST00000490032 HGSNATQ68CP4 663 aa7.5□□□□□ -1.21
HMGN1-218ENST00000490032 SLC51AQ86UW1 340 aa7.5□□□□□ -1.21
HMGN1-218ENST00000490032 FAM46AQ96IP4 442 aaKnown RBP7.5□□□□□ -1.21
HMGN1-218ENST00000490032 SOWAHDA6NJG2 315 aa7.49□□□□□ -1.21
HMGN1-218ENST00000490032 ESRRAP11474 423 aaPredicted RBP7.49□□□□□ -1.21
HMGN1-218ENST00000490032 USPL1Q5W0Q7 1092 aa7.49□□□□□ -1.21
HMGN1-218ENST00000490032 CCNJLQ8IV13 435 aa7.49□□□□□ -1.21
HMGN1-218ENST00000490032 ARMC10Q8N2F6 343 aa7.49□□□□□ -1.21
HMGN1-218ENST00000490032 ASAP3Q8TDY4 903 aa7.49□□□□□ -1.21
HMGN1-218ENST00000490032 SLC7A3Q8WY07 619 aa7.49□□□□□ -1.21
HMGN1-218ENST00000490032 TCF12Q99081 682 aa7.49□□□□□ -1.21
HMGN1-218ENST00000490032 MEGF11A6BM72 1044 aa7.48□□□□□ -1.21
HMGN1-218ENST00000490032 GPR182O15218 404 aa7.48□□□□□ -1.21
HMGN1-218ENST00000490032 CPNE3O75131 537 aaKnown RBP7.48□□□□□ -1.21
HMGN1-218ENST00000490032 NLRP12P59046 1061 aa7.48□□□□□ -1.21
HMGN1-218ENST00000490032 ORC1Q13415 861 aa7.48□□□□□ -1.21
HMGN1-218ENST00000490032 KIAA0319Q5VV43 1072 aa7.48□□□□□ -1.21
HMGN1-218ENST00000490032 RBCK1Q9BYM8 510 aa7.48□□□□□ -1.21
HMGN1-218ENST00000490032 RAXQ9Y2V3 346 aa7.48□□□□□ -1.21
HMGN1-218ENST00000490032 METTL12A8MUP2 240 aa7.47□□□□□ -1.21
HMGN1-218ENST00000490032 ANKRD34AQ69YU3 496 aa7.47□□□□□ -1.21
HMGN1-218ENST00000490032 ALKBH8Q96BT7 664 aaKnown RBP7.47□□□□□ -1.21
HMGN1-218ENST00000490032 RNF208Q9H0X6 261 aa7.47□□□□□ -1.21
HMGN1-218ENST00000490032 DNAJC25Q9H1X3 360 aa7.47□□□□□ -1.21
HMGN1-218ENST00000490032 LIN7BQ9HAP6 207 aa7.47□□□□□ -1.21
HMGN1-218ENST00000490032 A0A096LPE4 126 aa7.46□□□□□ -1.22
HMGN1-218ENST00000490032 A0A1W2PPZ6 126 aa7.46□□□□□ -1.22
HMGN1-218ENST00000490032 DHX15O43143 795 aaKnown RBP7.46□□□□□ -1.22
HMGN1-218ENST00000490032 FSTP19883 344 aa7.46□□□□□ -1.22
HMGN1-218ENST00000490032 GRIA4P48058 902 aa7.46□□□□□ -1.22
HMGN1-218ENST00000490032 ARTNQ5T4W7 220 aa7.46□□□□□ -1.22
HMGN1-218ENST00000490032 DMRTB1Q96MA1 342 aa7.46□□□□□ -1.22
HMGN1-218ENST00000490032 RUSC1Q9BVN2 902 aa7.46□□□□□ -1.22
HMGN1-218ENST00000490032 EIF4EBP3O60516 100 aaPredicted RBP7.45□□□□□ -1.22
HMGN1-218ENST00000490032 SPRED3Q2MJR0 410 aa7.45□□□□□ -1.22
HMGN1-218ENST00000490032 UTP4Q969X6 686 aaKnown RBP7.45□□□□□ -1.22
HMGN1-218ENST00000490032 MYRFLQ96LU7 910 aa7.45□□□□□ -1.22
HMGN1-218ENST00000490032 TMPRSS13Q9BYE2 586 aa7.45□□□□□ -1.22
HMGN1-218ENST00000490032 NRSN2Q9GZP1 204 aa7.45□□□□□ -1.22
HMGN1-218ENST00000490032 NIF3L1Q9GZT8 377 aa7.45□□□□□ -1.22
HMGN1-218ENST00000490032 CLEC4MQ9H2X3 399 aaPredicted RBP7.45□□□□□ -1.22
HMGN1-218ENST00000490032 RNF112Q9ULX5 631 aa7.45□□□□□ -1.22
HMGN1-218ENST00000490032 LOC100289279A0A1B0GTE1 492 aa7.44□□□□□ -1.22
HMGN1-218ENST00000490032 EIF1AYO14602 144 aaKnown RBP7.44□□□□□ -1.22
HMGN1-218ENST00000490032 PREPP48147 710 aa7.44□□□□□ -1.22
HMGN1-218ENST00000490032 PCDH1Q08174 1060 aa7.44□□□□□ -1.22
HMGN1-218ENST00000490032 LRP8Q14114 963 aa7.44□□□□□ -1.22
HMGN1-218ENST00000490032 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.44□□□□□ -1.22
HMGN1-218ENST00000490032 NPHS2Q9NP85 383 aa7.44□□□□□ -1.22
HMGN1-218ENST00000490032 SCO2A0A1W2PP80 73 aa7.43□□□□□ -1.22
HMGN1-218ENST00000490032 GSC2O15499 205 aa7.43□□□□□ -1.22
HMGN1-218ENST00000490032 ITPKAP23677 461 aa7.43□□□□□ -1.22
HMGN1-218ENST00000490032 ZNF423Q2M1K9 1284 aa7.43□□□□□ -1.22
HMGN1-218ENST00000490032 TMC1Q8TDI8 760 aa7.43□□□□□ -1.22
HMGN1-218ENST00000490032 CCDC74AQ96AQ1 378 aa7.43□□□□□ -1.22
HMGN1-218ENST00000490032 CSRNP1Q96S65 589 aa7.43□□□□□ -1.22
HMGN1-218ENST00000490032 SUGCTQ9HAC7 445 aa7.43□□□□□ -1.22
HMGN1-218ENST00000490032 STOML1Q9UBI4 398 aa7.43□□□□□ -1.22
HMGN1-218ENST00000490032 DLGAP3O95886 979 aa7.42□□□□□ -1.22
HMGN1-218ENST00000490032 IGLV1-40P01703 118 aa7.42□□□□□ -1.22
HMGN1-218ENST00000490032 GSTM4Q03013 218 aa7.42□□□□□ -1.22
HMGN1-218ENST00000490032 PTPN12Q05209 780 aaKnown RBP7.42□□□□□ -1.22
HMGN1-218ENST00000490032 PRPF40BQ6NWY9 871 aaKnown RBP7.42□□□□□ -1.22
HMGN1-218ENST00000490032 FDX2Q6P4F2 183 aa7.42□□□□□ -1.22
HMGN1-218ENST00000490032 FAM20CQ8IXL6 584 aa7.42□□□□□ -1.22
HMGN1-218ENST00000490032 SMG8Q8ND04 991 aaKnown RBP7.42□□□□□ -1.22
HMGN1-218ENST00000490032 USP26Q9BXU7 913 aa7.42□□□□□ -1.22
HMGN1-218ENST00000490032 EHD4Q9H223 541 aa7.42□□□□□ -1.22
HMGN1-218ENST00000490032 ZFP64Q9NPA5 681 aa7.42□□□□□ -1.22
HMGN1-218ENST00000490032 DCTN4Q9UJW0 460 aa7.42□□□□□ -1.22
HMGN1-218ENST00000490032 HIF3AQ9Y2N7 669 aa7.42□□□□□ -1.22
HMGN1-218ENST00000490032 SART1O43290 800 aaKnown RBP7.41□□□□□ -1.22
HMGN1-218ENST00000490032 TIAF1O95411 115 aa7.41□□□□□ -1.22
HMGN1-218ENST00000490032 TMC7Q7Z402 723 aa7.41□□□□□ -1.22
HMGN1-218ENST00000490032 CLEC10AQ8IUN9 316 aa7.41□□□□□ -1.22
HMGN1-218ENST00000490032 ZNF576Q9H609 170 aa7.41□□□□□ -1.22
HMGN1-218ENST00000490032 C7orf69Q9H7B7 122 aa7.41□□□□□ -1.22
HMGN1-218ENST00000490032 ABCB6Q9NP58 842 aa7.41□□□□□ -1.22
HMGN1-218ENST00000490032 B3GALT4O96024 378 aa7.4□□□□□ -1.22
HMGN1-218ENST00000490032 BMP3P12645 472 aa7.4□□□□□ -1.22
HMGN1-218ENST00000490032 EXOSC6Q5RKV6 272 aaKnown RBP7.4□□□□□ -1.22
HMGN1-218ENST00000490032 NUTM2GQ5VZR2 741 aa7.4□□□□□ -1.22
HMGN1-218ENST00000490032 FAM83CQ9BQN1 747 aa7.4□□□□□ -1.22
HMGN1-218ENST00000490032 CYP4F12Q9HCS2 524 aa7.4□□□□□ -1.22
HMGN1-218ENST00000490032 BIN2Q9UBW5 565 aaPredicted RBP7.4□□□□□ -1.22
HMGN1-218ENST00000490032 HYAL3O43820 417 aaPredicted RBP7.39□□□□□ -1.23
HMGN1-218ENST00000490032 DSC3Q14574 896 aa7.39□□□□□ -1.23
HMGN1-218ENST00000490032 RNF43Q68DV7 783 aa7.39□□□□□ -1.23
HMGN1-218ENST00000490032 TRIM42Q8IWZ5 723 aa7.39□□□□□ -1.23
HMGN1-218ENST00000490032 GLIS3Q8NEA6 775 aa7.39□□□□□ -1.23
HMGN1-218ENST00000490032 HMX2A2RU54 273 aa7.38□□□□□ -1.23
HMGN1-218ENST00000490032 CYP11A1P05108 521 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms