RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 ORC3Q9UBD5 711 aaPredicted RBP18.41■□□□□ 0.54
BRD9-208ENST00000489816 AKAP2Q9Y2D5 859 aa18.41■□□□□ 0.54
BRD9-208ENST00000489816 ZSCAN16Q9H4T2 348 aaPredicted RBP18.41■□□□□ 0.54
BRD9-208ENST00000489816 GPR108Q9NPR9 543 aa18.41■□□□□ 0.54
BRD9-208ENST00000489816 CLIC4Q9Y696 253 aa18.41■□□□□ 0.54
BRD9-208ENST00000489816 NKX1-1Q15270 411 aaPredicted RBP18.4■□□□□ 0.54
BRD9-208ENST00000489816 CIAO1O76071 339 aa18.4■□□□□ 0.54
BRD9-208ENST00000489816 SDF4Q9BRK5 362 aa18.4■□□□□ 0.54
BRD9-208ENST00000489816 PIH1D3Q9NQM4 214 aaKnown RBP18.4■□□□□ 0.54
BRD9-208ENST00000489816 PCCAP05165 728 aaPredicted RBP18.4■□□□□ 0.54
BRD9-208ENST00000489816 CCDC73Q6ZRK6 1079 aa18.4■□□□□ 0.54
BRD9-208ENST00000489816 PHKBQ93100 1093 aa18.4■□□□□ 0.54
BRD9-208ENST00000489816 TOMM22Q9NS69 142 aa18.4■□□□□ 0.54
BRD9-208ENST00000489816 CARMIL3Q8ND23 1372 aa18.4■□□□□ 0.54
BRD9-208ENST00000489816 RRP9O43818 475 aaKnown RBP18.39■□□□□ 0.53
BRD9-208ENST00000489816 MARCKSP29966 332 aaPredicted RBP18.39■□□□□ 0.53
BRD9-208ENST00000489816 ANTXR2P58335 489 aa18.39■□□□□ 0.53
BRD9-208ENST00000489816 GIGYF2Q6Y7W6 1299 aaKnown RBP18.39■□□□□ 0.53
BRD9-208ENST00000489816 MICU3Q86XE3 530 aa18.39■□□□□ 0.53
BRD9-208ENST00000489816 C8orf76Q96K31 380 aa18.39■□□□□ 0.53
BRD9-208ENST00000489816 WWC3Q9ULE0 1092 aa18.39■□□□□ 0.53
BRD9-208ENST00000489816 B4E1Z4 1266 aa18.39■□□□□ 0.53
BRD9-208ENST00000489816 HMGN5P82970 282 aaKnown RBP18.39■□□□□ 0.53
BRD9-208ENST00000489816 RIPOR2Q9Y4F9 1068 aa18.39■□□□□ 0.53
BRD9-208ENST00000489816 SOS2Q07890 1332 aaPredicted RBP18.39■□□□□ 0.53
BRD9-208ENST00000489816 KINO60870 393 aaKnown RBP18.38■□□□□ 0.53
BRD9-208ENST00000489816 APPBP2Q92624 585 aa18.38■□□□□ 0.53
BRD9-208ENST00000489816 ANKRD18BA2A2Z9 1011 aa18.38■□□□□ 0.53
BRD9-208ENST00000489816 RRP12Q5JTH9 1297 aaKnown RBP18.38■□□□□ 0.53
BRD9-208ENST00000489816 SMIM5Q71RC9 77 aa18.38■□□□□ 0.53
BRD9-208ENST00000489816 FILIP1Q7Z7B0 1213 aa18.38■□□□□ 0.53
BRD9-208ENST00000489816 SEC31BQ9NQW1 1179 aa18.38■□□□□ 0.53
BRD9-208ENST00000489816 PCDHA7Q9UN72 937 aa18.38■□□□□ 0.53
BRD9-208ENST00000489816 MAP3K15Q6ZN16 1313 aa18.38■□□□□ 0.53
BRD9-208ENST00000489816 GOLGA6L19H0YKK7 550 aa18.37■□□□□ 0.53
BRD9-208ENST00000489816 ADAMTS2O95450 1211 aa18.37■□□□□ 0.53
BRD9-208ENST00000489816 KCNQ4P56696 695 aa18.37■□□□□ 0.53
BRD9-208ENST00000489816 STK38Q15208 465 aa18.37■□□□□ 0.53
BRD9-208ENST00000489816 C16orf45Q96MC5 204 aaPredicted RBP18.37■□□□□ 0.53
BRD9-208ENST00000489816 ZKSCAN3Q9BRR0 538 aa18.37■□□□□ 0.53
BRD9-208ENST00000489816 LLPHQ9BRT6 129 aaKnown RBP18.37■□□□□ 0.53
BRD9-208ENST00000489816 ZNF532Q9HCE3 1301 aa18.37■□□□□ 0.53
BRD9-208ENST00000489816 KCPQ6ZWJ8 1503 aa18.37■□□□□ 0.53
BRD9-208ENST00000489816 BECN2A8MW95 431 aa18.37■□□□□ 0.53
BRD9-208ENST00000489816 DZIP3Q86Y13 1208 aaKnown RBP18.37■□□□□ 0.53
BRD9-208ENST00000489816 TBC1D10CQ8IV04 446 aa18.37■□□□□ 0.53
BRD9-208ENST00000489816 RCOR1Q9UKL0 485 aa18.37■□□□□ 0.53
BRD9-208ENST00000489816 WTIPA6NIX2 430 aaPredicted RBP18.36■□□□□ 0.53
BRD9-208ENST00000489816 KIF28PB7ZC32 967 aa18.36■□□□□ 0.53
BRD9-208ENST00000489816 CTSWP56202 376 aa18.36■□□□□ 0.53
BRD9-208ENST00000489816 SNW1Q13573 536 aaKnown RBP18.36■□□□□ 0.53
BRD9-208ENST00000489816 CCDC144BQ3MJ40 725 aa18.36■□□□□ 0.53
BRD9-208ENST00000489816 NAA16Q6N069 864 aaPredicted RBP18.36■□□□□ 0.53
BRD9-208ENST00000489816 CYB5R4Q7L1T6 521 aa18.36■□□□□ 0.53
BRD9-208ENST00000489816 CMTR1Q8N1G2 835 aaKnown RBP18.36■□□□□ 0.53
BRD9-208ENST00000489816 NCOA7Q8NI08 942 aa18.36■□□□□ 0.53
BRD9-208ENST00000489816 CTNNA3Q9UI47 895 aa18.36■□□□□ 0.53
BRD9-208ENST00000489816 HPS5Q9UPZ3 1129 aa18.36■□□□□ 0.53
BRD9-208ENST00000489816 CCDC102BQ68D86 513 aa18.36■□□□□ 0.53
BRD9-208ENST00000489816 VSIG10Q8N0Z9 540 aa18.36■□□□□ 0.53
BRD9-208ENST00000489816 KIAA1524Q8TCG1 905 aa18.36■□□□□ 0.53
BRD9-208ENST00000489816 CSF1RP07333 972 aa18.36■□□□□ 0.53
BRD9-208ENST00000489816 NDUFA8P51970 172 aa18.36■□□□□ 0.53
BRD9-208ENST00000489816 CTDSPL2Q05D32 466 aa18.36■□□□□ 0.53
BRD9-208ENST00000489816 TRDNQ13061 729 aa18.36■□□□□ 0.53
BRD9-208ENST00000489816 ZNF274Q96GC6 653 aaPredicted RBP18.36■□□□□ 0.53
BRD9-208ENST00000489816 CLIP2Q9UDT6 1046 aa18.36■□□□□ 0.53
BRD9-208ENST00000489816 KIF3AQ9Y496 699 aa18.36■□□□□ 0.53
BRD9-208ENST00000489816 AGXT2Q9BYV1 514 aa18.35■□□□□ 0.53
BRD9-208ENST00000489816 NBPF3Q9H094 633 aa18.35■□□□□ 0.53
BRD9-208ENST00000489816 GLI3P10071 1580 aa18.35■□□□□ 0.53
BRD9-208ENST00000489816 CYP19A1P11511 503 aaPredicted RBP18.35■□□□□ 0.53
BRD9-208ENST00000489816 ZNF75DP51815 510 aa18.35■□□□□ 0.53
BRD9-208ENST00000489816 NFXL1Q6ZNB6 911 aa18.35■□□□□ 0.53
BRD9-208ENST00000489816 ZNF396Q96N95 335 aaPredicted RBP18.35■□□□□ 0.53
BRD9-208ENST00000489816 GOLGA6L6A8MZA4 724 aa18.34■□□□□ 0.53
BRD9-208ENST00000489816 MB21D2Q8IYB1 491 aaPredicted RBP18.34■□□□□ 0.53
BRD9-208ENST00000489816 MIGA1Q8NAN2 632 aa18.34■□□□□ 0.53
BRD9-208ENST00000489816 PRKAB2O43741 272 aa18.34■□□□□ 0.53
BRD9-208ENST00000489816 PDIA4P13667 645 aaKnown RBP18.34■□□□□ 0.53
BRD9-208ENST00000489816 UBN2Q6ZU65 1347 aa18.34■□□□□ 0.53
BRD9-208ENST00000489816 PTPN21Q16825 1174 aa18.34■□□□□ 0.53
BRD9-208ENST00000489816 MAGEB6Q8N7X4 407 aa18.34■□□□□ 0.53
BRD9-208ENST00000489816 CACTINQ8WUQ7 758 aaKnown RBP18.34■□□□□ 0.53
BRD9-208ENST00000489816 ARMT1Q9H993 441 aa18.34■□□□□ 0.53
BRD9-208ENST00000489816 RFX7Q2KHR2 1363 aa18.34■□□□□ 0.53
BRD9-208ENST00000489816 SMIM22K7EJ46 135 aa18.33■□□□□ 0.53
BRD9-208ENST00000489816 PDE8BO95263 885 aa18.33■□□□□ 0.53
BRD9-208ENST00000489816 AOPEPQ8N6M6 819 aa18.33■□□□□ 0.53
BRD9-208ENST00000489816 ZNF592Q92610 1267 aa18.33■□□□□ 0.53
BRD9-208ENST00000489816 AIDAQ96BJ3 306 aa18.33■□□□□ 0.53
BRD9-208ENST00000489816 DCCP43146 1447 aa18.33■□□□□ 0.53
BRD9-208ENST00000489816 SALL1Q9NSC2 1324 aa18.33■□□□□ 0.52
BRD9-208ENST00000489816 GNL2Q13823 731 aaKnown RBP18.33■□□□□ 0.52
BRD9-208ENST00000489816 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.33■□□□□ 0.523e-7■■□□□ 12.5
BRD9-208ENST00000489816 EXOC5O00471 708 aa18.32■□□□□ 0.52
BRD9-208ENST00000489816 ATP2B1P20020 1258 aa18.32■□□□□ 0.52
BRD9-208ENST00000489816 ADD2P35612 726 aa18.32■□□□□ 0.52
BRD9-208ENST00000489816 SYNE3Q6ZMZ3 975 aa18.32■□□□□ 0.52
BRD9-208ENST00000489816 LAMA4Q16363 1823 aa18.32■□□□□ 0.52
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