RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 OFD1O75665 1012 aa21.81■■□□□ 1.08
COL16A1-215ENST00000488897 NEUROD6Q96NK8 337 aa21.81■■□□□ 1.08
COL16A1-215ENST00000488897 TTC41PQ6P2S7 1318 aa21.81■■□□□ 1.08
COL16A1-215ENST00000488897 MAP4K4O95819 1239 aaPredicted RBP21.81■■□□□ 1.08
COL16A1-215ENST00000488897 ADORA1P30542 326 aa21.81■■□□□ 1.08
COL16A1-215ENST00000488897 DALRD3Q5D0E6 543 aaKnown RBP21.81■■□□□ 1.08
COL16A1-215ENST00000488897 C7orf43Q8WVR3 580 aa21.81■■□□□ 1.08
COL16A1-215ENST00000488897 POLLQ9UGP5 575 aa21.81■■□□□ 1.08
COL16A1-215ENST00000488897 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.8■■□□□ 1.08
COL16A1-215ENST00000488897 LSG1Q9H089 658 aaKnown RBP21.8■■□□□ 1.08
COL16A1-215ENST00000488897 IQSEC3Q9UPP2 1182 aaPredicted RBP21.8■■□□□ 1.08
COL16A1-215ENST00000488897 SNX14Q9Y5W7 946 aa21.8■■□□□ 1.08
COL16A1-215ENST00000488897 RIC1Q4ADV7 1423 aa21.8■■□□□ 1.08
COL16A1-215ENST00000488897 CNKSR1Q969H4 720 aa21.8■■□□□ 1.08
COL16A1-215ENST00000488897 EAF2Q96CJ1 260 aaPredicted RBP21.8■■□□□ 1.08
COL16A1-215ENST00000488897 GLRX3O76003 335 aaKnown RBP21.79■■□□□ 1.08
COL16A1-215ENST00000488897 TSPY26PQ9H489 355 aa21.79■■□□□ 1.08
COL16A1-215ENST00000488897 ATP6V0A2Q9Y487 856 aa21.79■■□□□ 1.08
COL16A1-215ENST00000488897 NDUFB9Q9Y6M9 179 aa21.79■■□□□ 1.08
COL16A1-215ENST00000488897 RTL9Q8NET4 1388 aa21.79■■□□□ 1.08
COL16A1-215ENST00000488897 BBOX1O75936 387 aa21.79■■□□□ 1.08
COL16A1-215ENST00000488897 MCM5P33992 734 aa21.79■■□□□ 1.08
COL16A1-215ENST00000488897 VGLL2Q8N8G2 317 aa21.79■■□□□ 1.08
COL16A1-215ENST00000488897 TTC14Q96N46 770 aa21.79■■□□□ 1.08
COL16A1-215ENST00000488897 JAG2Q9Y219 1238 aa21.79■■□□□ 1.08
COL16A1-215ENST00000488897 C6orf229H3BNL8 230 aa21.78■■□□□ 1.08
COL16A1-215ENST00000488897 ZNF500O60304 480 aaPredicted RBP21.78■■□□□ 1.08
COL16A1-215ENST00000488897 UBE2Q2Q8WVN8 375 aa21.78■■□□□ 1.08
COL16A1-215ENST00000488897 RUFY2Q8WXA3 655 aa21.78■■□□□ 1.08
COL16A1-215ENST00000488897 RRP9O43818 475 aaKnown RBP21.78■■□□□ 1.08
COL16A1-215ENST00000488897 CEP126Q9P2H0 1117 aa21.78■■□□□ 1.08
COL16A1-215ENST00000488897 LIMCH1Q9UPQ0 1083 aa21.78■■□□□ 1.08
COL16A1-215ENST00000488897 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.78■■□□□ 1.08
COL16A1-215ENST00000488897 RASSF7Q02833 373 aa21.77■■□□□ 1.08
COL16A1-215ENST00000488897 TMEM87AQ8NBN3 555 aa21.77■■□□□ 1.08
COL16A1-215ENST00000488897 CCDC39Q9UFE4 941 aa21.77■■□□□ 1.08
COL16A1-215ENST00000488897 PDE8BO95263 885 aa21.77■■□□□ 1.08
COL16A1-215ENST00000488897 IL15P40933 162 aaPredicted RBP21.77■■□□□ 1.08
COL16A1-215ENST00000488897 USP48Q86UV5 1035 aa21.77■■□□□ 1.08
COL16A1-215ENST00000488897 CLASRPQ8N2M8 674 aaKnown RBP21.77■■□□□ 1.08
COL16A1-215ENST00000488897 UFL1O94874 794 aa21.76■■□□□ 1.07
COL16A1-215ENST00000488897 GYG1P46976 350 aa21.76■■□□□ 1.07
COL16A1-215ENST00000488897 TERF1P54274 439 aa21.76■■□□□ 1.07
COL16A1-215ENST00000488897 AACSQ86V21 672 aa21.76■■□□□ 1.07
COL16A1-215ENST00000488897 DBNDD2Q9BQY9 259 aa21.76■■□□□ 1.07
COL16A1-215ENST00000488897 ZNF277Q9NRM2 450 aaPredicted RBP21.76■■□□□ 1.07
COL16A1-215ENST00000488897 A0A1B0GUL7 405 aa21.76■■□□□ 1.07
COL16A1-215ENST00000488897 PRELPP51888 382 aa21.76■■□□□ 1.07
COL16A1-215ENST00000488897 CWC27Q6UX04 472 aaKnown RBP21.76■■□□□ 1.07
COL16A1-215ENST00000488897 SP8Q8IXZ3 490 aa21.76■■□□□ 1.07
COL16A1-215ENST00000488897 AK2P54819 239 aa21.75■■□□□ 1.07
COL16A1-215ENST00000488897 HSP90AA2PQ14568 343 aaPredicted RBP21.75■■□□□ 1.07
COL16A1-215ENST00000488897 DPP8Q6V1X1 898 aaPredicted RBP21.75■■□□□ 1.07
COL16A1-215ENST00000488897 MPNDQ8N594 471 aa21.75■■□□□ 1.07
COL16A1-215ENST00000488897 ZKSCAN5Q9Y2L8 839 aa21.75■■□□□ 1.07
COL16A1-215ENST00000488897 ERC1Q8IUD2 1116 aa21.75■■□□□ 1.07
COL16A1-215ENST00000488897 RASEFQ8IZ41 740 aa21.75■■□□□ 1.07
COL16A1-215ENST00000488897 KCNQ5Q9NR82 932 aa21.75■■□□□ 1.07
COL16A1-215ENST00000488897 DIAPH3Q9NSV4 1193 aa21.75■■□□□ 1.07
COL16A1-215ENST00000488897 RPAP1Q9BWH6 1393 aaPredicted RBP21.74■■□□□ 1.07
COL16A1-215ENST00000488897 KCNJ4P48050 445 aa21.74■■□□□ 1.07
COL16A1-215ENST00000488897 BCAMP50895 628 aa21.74■■□□□ 1.07
COL16A1-215ENST00000488897 DOK7Q18PE1 504 aa21.74■■□□□ 1.07
COL16A1-215ENST00000488897 TNNI3KQ59H18 835 aa21.74■■□□□ 1.07
COL16A1-215ENST00000488897 ARHGAP27Q6ZUM4 889 aa21.74■■□□□ 1.07
COL16A1-215ENST00000488897 TBC1D16Q8TBP0 767 aa21.74■■□□□ 1.07
COL16A1-215ENST00000488897 GPATCH3Q96I76 525 aa21.74■■□□□ 1.07
COL16A1-215ENST00000488897 FPGT-TNNI3KV9GXZ4 949 aa21.74■■□□□ 1.07
COL16A1-215ENST00000488897 GADD45BO75293 160 aaPredicted RBP21.74■■□□□ 1.07
COL16A1-215ENST00000488897 CIAO1O76071 339 aa21.74■■□□□ 1.07
COL16A1-215ENST00000488897 ZSCAN22P10073 491 aaPredicted RBP21.74■■□□□ 1.07
COL16A1-215ENST00000488897 GPR162Q16538 588 aa21.74■■□□□ 1.07
COL16A1-215ENST00000488897 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.74■■□□□ 1.07
COL16A1-215ENST00000488897 BRCA1P38398 1863 aaKnown RBP21.73■■□□□ 1.07
COL16A1-215ENST00000488897 PI16Q6UXB8 463 aa21.73■■□□□ 1.07
COL16A1-215ENST00000488897 RNF214Q8ND24 703 aa21.73■■□□□ 1.07
COL16A1-215ENST00000488897 DBNLQ9UJU6 430 aaKnown RBP21.73■■□□□ 1.07
COL16A1-215ENST00000488897 ATP6V1DQ9Y5K8 247 aa21.73■■□□□ 1.07
COL16A1-215ENST00000488897 ATP2B3Q16720 1220 aa21.72■■□□□ 1.07
COL16A1-215ENST00000488897 AOC3Q16853 763 aa21.72■■□□□ 1.07
COL16A1-215ENST00000488897 FOXD4L6Q3SYB3 417 aaPredicted RBP21.72■■□□□ 1.07
COL16A1-215ENST00000488897 FOXD4L3Q6VB84 417 aaPredicted RBP21.72■■□□□ 1.07
COL16A1-215ENST00000488897 FAM184AQ8NB25 1140 aa21.72■■□□□ 1.07
COL16A1-215ENST00000488897 GDPD2Q9HCC8 539 aa21.72■■□□□ 1.07
COL16A1-215ENST00000488897 ECHDC1Q9NTX5 307 aa21.72■■□□□ 1.07
COL16A1-215ENST00000488897 ZNF804BA4D1E1 1349 aa21.72■■□□□ 1.07
COL16A1-215ENST00000488897 NFKBIEO00221 500 aa21.72■■□□□ 1.07
COL16A1-215ENST00000488897 MROH5Q6ZUA9 1318 aa21.72■■□□□ 1.07
COL16A1-215ENST00000488897 RUFY3Q7L099 469 aa21.72■■□□□ 1.07
COL16A1-215ENST00000488897 SMC3Q9UQE7 1217 aa21.72■■□□□ 1.07
COL16A1-215ENST00000488897 DLEC1Q9Y238 1755 aa21.72■■□□□ 1.07
COL16A1-215ENST00000488897 STX6O43752 255 aa21.71■■□□□ 1.07
COL16A1-215ENST00000488897 LETM1O95202 739 aaPredicted RBP21.71■■□□□ 1.07
COL16A1-215ENST00000488897 XAGE2Q96GT9 111 aa21.71■■□□□ 1.07
COL16A1-215ENST00000488897 UVSSAQ2YD98 709 aa21.71■■□□□ 1.07
COL16A1-215ENST00000488897 DBNDD1Q9H9R9 158 aa21.71■■□□□ 1.07
COL16A1-215ENST00000488897 GGA1Q9UJY5 639 aa21.71■■□□□ 1.07
COL16A1-215ENST00000488897 XDHP47989 1333 aa21.7■■□□□ 1.07
COL16A1-215ENST00000488897 CSPP1Q1MSJ5 1256 aa21.7■■□□□ 1.06
COL16A1-215ENST00000488897 ZSCAN31Q96LW9 406 aaPredicted RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms