RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 MYRFLQ96LU7 910 aa8.78□□□□□ -1
SMC4-219ENST00000487747 C7orf69Q9H7B7 122 aa8.78□□□□□ -1
SMC4-219ENST00000487747 EDN3P14138 238 aa8.77□□□□□ -1.01
SMC4-219ENST00000487747 USP5P45974 858 aa8.77□□□□□ -1.01
SMC4-219ENST00000487747 SERPINB4P48594 390 aa8.77□□□□□ -1.01
SMC4-219ENST00000487747 C19orf57Q0VDD7 668 aa8.77□□□□□ -1.01
SMC4-219ENST00000487747 ASAP3Q8TDY4 903 aa8.77□□□□□ -1.01
SMC4-219ENST00000487747 KRTAP9-9Q9BYP9 154 aa8.77□□□□□ -1.01
SMC4-219ENST00000487747 KRTAP9-4Q9BYQ2 154 aa8.77□□□□□ -1.01
SMC4-219ENST00000487747 ZFYVE28Q9HCC9 887 aa8.77□□□□□ -1.01
SMC4-219ENST00000487747 DLGAP3O95886 979 aa8.76□□□□□ -1.01
SMC4-219ENST00000487747 TGFB1P01137 390 aa8.76□□□□□ -1.01
SMC4-219ENST00000487747 EHHADHQ08426 723 aa8.76□□□□□ -1.01
SMC4-219ENST00000487747 IKBKEQ14164 716 aa8.76□□□□□ -1.01
SMC4-219ENST00000487747 MTMR7Q9Y216 660 aa8.76□□□□□ -1.01
SMC4-219ENST00000487747 ICMTO60725 284 aa8.75□□□□□ -1.01
SMC4-219ENST00000487747 UVSSAQ2YD98 709 aa8.75□□□□□ -1.01
SMC4-219ENST00000487747 SLC51AQ86UW1 340 aa8.75□□□□□ -1.01
SMC4-219ENST00000487747 FAM20CQ8IXL6 584 aa8.75□□□□□ -1.01
SMC4-219ENST00000487747 RUSC1Q9BVN2 902 aa8.75□□□□□ -1.01
SMC4-219ENST00000487747 BHLHE41Q9C0J9 482 aaPredicted RBP8.75□□□□□ -1.01
SMC4-219ENST00000487747 RNF208Q9H0X6 261 aa8.75□□□□□ -1.01
SMC4-219ENST00000487747 AMOTL2Q9Y2J4 779 aa8.75□□□□□ -1.01
SMC4-219ENST00000487747 BMP3P12645 472 aa8.74□□□□□ -1.01
SMC4-219ENST00000487747 CD97P48960 835 aa8.74□□□□□ -1.01
SMC4-219ENST00000487747 NFIAQ12857 509 aa8.74□□□□□ -1.01
SMC4-219ENST00000487747 ZDHHC13Q8IUH4 622 aa8.74□□□□□ -1.01
SMC4-219ENST00000487747 PCMTD2Q9NV79 361 aa8.74□□□□□ -1.01
SMC4-219ENST00000487747 ESRRAP11474 423 aaPredicted RBP8.73□□□□□ -1.01
SMC4-219ENST00000487747 USPL1Q5W0Q7 1092 aa8.73□□□□□ -1.01
SMC4-219ENST00000487747 ANKRD34AQ69YU3 496 aa8.73□□□□□ -1.01
SMC4-219ENST00000487747 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.73□□□□□ -1.01
SMC4-219ENST00000487747 USP26Q9BXU7 913 aa8.73□□□□□ -1.01
SMC4-219ENST00000487747 LOC100289279A0A1B0GTE1 492 aa8.72□□□□□ -1.01
SMC4-219ENST00000487747 H3BRB1 525 aa8.72□□□□□ -1.01
SMC4-219ENST00000487747 SART1O43290 800 aaKnown RBP8.72□□□□□ -1.01
SMC4-219ENST00000487747 ARL4DP49703 201 aa8.72□□□□□ -1.01
SMC4-219ENST00000487747 ARHGAP4P98171 946 aa8.72□□□□□ -1.01
SMC4-219ENST00000487747 RNF43Q68DV7 783 aa8.72□□□□□ -1.01
SMC4-219ENST00000487747 BEND4Q6ZU67 534 aa8.72□□□□□ -1.01
SMC4-219ENST00000487747 KCNF1Q9H3M0 494 aa8.72□□□□□ -1.01
SMC4-219ENST00000487747 TUT1Q9H6E5 874 aaKnown RBP8.72□□□□□ -1.01
SMC4-219ENST00000487747 USTQ9Y2C2 406 aa8.72□□□□□ -1.01
SMC4-219ENST00000487747 A0A1W2PP55 124 aa8.71□□□□□ -1.02
SMC4-219ENST00000487747 MEGF11A6BM72 1044 aa8.71□□□□□ -1.02
SMC4-219ENST00000487747 GSC2O15499 205 aa8.71□□□□□ -1.02
SMC4-219ENST00000487747 GRIA4P48058 902 aa8.71□□□□□ -1.02
SMC4-219ENST00000487747 SPRED3Q2MJR0 410 aa8.71□□□□□ -1.02
SMC4-219ENST00000487747 SGO2Q562F6 1265 aa8.71□□□□□ -1.02
SMC4-219ENST00000487747 CLEC10AQ8IUN9 316 aa8.71□□□□□ -1.02
SMC4-219ENST00000487747 ARID3AQ99856 593 aa8.71□□□□□ -1.02
SMC4-219ENST00000487747 FAM83CQ9BQN1 747 aa8.71□□□□□ -1.02
SMC4-219ENST00000487747 TMPRSS13Q9BYE2 586 aa8.71□□□□□ -1.02
SMC4-219ENST00000487747 EGFL7Q9UHF1 273 aa8.71□□□□□ -1.02
SMC4-219ENST00000487747 PRR19A6NJB7 356 aa8.7□□□□□ -1.02
SMC4-219ENST00000487747 DRD2P14416 443 aa8.7□□□□□ -1.02
SMC4-219ENST00000487747 FDX2Q6P4F2 183 aa8.7□□□□□ -1.02
SMC4-219ENST00000487747 TCF12Q99081 682 aa8.7□□□□□ -1.02
SMC4-219ENST00000487747 ADAMTS4O75173 837 aa8.69□□□□□ -1.02
SMC4-219ENST00000487747 GSTM4Q03013 218 aa8.69□□□□□ -1.02
SMC4-219ENST00000487747 ZNF423Q2M1K9 1284 aa8.69□□□□□ -1.02
SMC4-219ENST00000487747 NUTM2GQ5VZR2 741 aa8.69□□□□□ -1.02
SMC4-219ENST00000487747 CCNJLQ8IV13 435 aa8.69□□□□□ -1.02
SMC4-219ENST00000487747 GALNT12Q8IXK2 581 aa8.69□□□□□ -1.02
SMC4-219ENST00000487747 DBNDD2Q9BQY9 259 aa8.69□□□□□ -1.02
SMC4-219ENST00000487747 NRSN2Q9GZP1 204 aa8.69□□□□□ -1.02
SMC4-219ENST00000487747 BRPF3Q9ULD4 1205 aa8.69□□□□□ -1.02
SMC4-219ENST00000487747 A0A096LPE4 126 aa8.68□□□□□ -1.02
SMC4-219ENST00000487747 A0A1W2PPZ6 126 aa8.68□□□□□ -1.02
SMC4-219ENST00000487747 BTBD11A6QL63 1104 aa8.68□□□□□ -1.02
SMC4-219ENST00000487747 TIAF1O95411 115 aa8.68□□□□□ -1.02
SMC4-219ENST00000487747 CTSBP07858 339 aa8.68□□□□□ -1.02
SMC4-219ENST00000487747 ORC1Q13415 861 aa8.68□□□□□ -1.02
SMC4-219ENST00000487747 GLYCTKQ8IVS8 523 aa8.68□□□□□ -1.02
SMC4-219ENST00000487747 SHISA5Q8N114 240 aa8.68□□□□□ -1.02
SMC4-219ENST00000487747 C12orf50Q8NA57 414 aaPredicted RBP8.68□□□□□ -1.02
SMC4-219ENST00000487747 SHKBP1Q8TBC3 707 aa8.68□□□□□ -1.02
SMC4-219ENST00000487747 SOX17Q9H6I2 414 aaPredicted RBP8.68□□□□□ -1.02
SMC4-219ENST00000487747 COBLO75128 1261 aa8.67□□□□□ -1.02
SMC4-219ENST00000487747 SMG8Q8ND04 991 aaKnown RBP8.67□□□□□ -1.02
SMC4-219ENST00000487747 LIN7BQ9HAP6 207 aa8.67□□□□□ -1.02
SMC4-219ENST00000487747 KRTAP4-8A0A0G2JLE6 195 aa8.66□□□□□ -1.02
SMC4-219ENST00000487747 KIAA1324LA8MWY0 1029 aaPredicted RBP8.66□□□□□ -1.02
SMC4-219ENST00000487747 SUPT5HO00267 1087 aaKnown RBP8.66□□□□□ -1.02
SMC4-219ENST00000487747 GAS2O43903 313 aaKnown RBP8.66□□□□□ -1.02
SMC4-219ENST00000487747 MAP4P27816 1152 aaKnown RBP8.66□□□□□ -1.02
SMC4-219ENST00000487747 KRTAP19-1Q8IUB9 90 aa8.66□□□□□ -1.02
SMC4-219ENST00000487747 MFSD14AQ96MC6 490 aa8.66□□□□□ -1.02
SMC4-219ENST00000487747 SUGCTQ9HAC7 445 aa8.66□□□□□ -1.02
SMC4-219ENST00000487747 ECEL1O95672 775 aa8.65□□□□□ -1.02
SMC4-219ENST00000487747 PCDH1Q08174 1060 aa8.65□□□□□ -1.02
SMC4-219ENST00000487747 CDPF1Q6NVV7 123 aa8.65□□□□□ -1.02
SMC4-219ENST00000487747 TXNDC2Q86VQ3 553 aa8.65□□□□□ -1.02
SMC4-219ENST00000487747 RETREG2Q8NC44 543 aa8.65□□□□□ -1.02
SMC4-219ENST00000487747 HIF3AQ9Y2N7 669 aa8.65□□□□□ -1.02
SMC4-219ENST00000487747 WDR64B1ANS9 1081 aa8.64□□□□□ -1.03
SMC4-219ENST00000487747 IGHA2P01877 340 aa8.64□□□□□ -1.03
SMC4-219ENST00000487747 HOXA10P31260 410 aaPredicted RBP8.64□□□□□ -1.03
SMC4-219ENST00000487747 EXOSC6Q5RKV6 272 aaKnown RBP8.64□□□□□ -1.03
SMC4-219ENST00000487747 B4GALNT3Q6L9W6 998 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms