RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 ECHDC1Q9NTX5 307 aa8.47□□□□□ -1.05
UBR4-214ENST00000486515 PODXL2Q9NZ53 605 aa8.47□□□□□ -1.05
UBR4-214ENST00000486515 COLQQ9Y215 455 aaPredicted RBP8.47□□□□□ -1.05
UBR4-214ENST00000486515 TTC41PQ6P2S7 1318 aa8.47□□□□□ -1.05
UBR4-214ENST00000486515 HIBADHP31937 336 aaKnown RBP8.46□□□□□ -1.06
UBR4-214ENST00000486515 GPSM2P81274 684 aa8.46□□□□□ -1.06
UBR4-214ENST00000486515 XAGE2Q96GT9 111 aa8.46□□□□□ -1.06
UBR4-214ENST00000486515 VPS33BQ9H267 617 aa8.46□□□□□ -1.06
UBR4-214ENST00000486515 COL11A2P13942 1736 aaPredicted RBP8.46□□□□□ -1.06
UBR4-214ENST00000486515 LTBP1Q14766 1721 aa8.46□□□□□ -1.06
UBR4-214ENST00000486515 KIAA1551Q9HCM1 1747 aa8.46□□□□□ -1.06
UBR4-214ENST00000486515 ANKRD31Q8N7Z5 1873 aa8.45□□□□□ -1.06
UBR4-214ENST00000486515 MAP2K2P36507 400 aa8.45□□□□□ -1.06
UBR4-214ENST00000486515 TTF1Q15361 905 aaPredicted RBP8.45□□□□□ -1.06
UBR4-214ENST00000486515 CYP4F22Q6NT55 531 aa8.45□□□□□ -1.06
UBR4-214ENST00000486515 CNTROBQ8N137 903 aa8.45□□□□□ -1.06
UBR4-214ENST00000486515 TBC1D16Q8TBP0 767 aa8.45□□□□□ -1.06
UBR4-214ENST00000486515 JDP2Q8WYK2 163 aa8.45□□□□□ -1.06
UBR4-214ENST00000486515 FBXW7Q969H0 707 aa8.45□□□□□ -1.06
UBR4-214ENST00000486515 RILPL2Q969X0 211 aa8.45□□□□□ -1.06
UBR4-214ENST00000486515 EAF2Q96CJ1 260 aaPredicted RBP8.45□□□□□ -1.06
UBR4-214ENST00000486515 TAOK3Q9H2K8 898 aa8.45□□□□□ -1.06
UBR4-214ENST00000486515 DENND2AQ9ULE3 1009 aa8.45□□□□□ -1.06
UBR4-214ENST00000486515 COL4A1P02462 1669 aa8.45□□□□□ -1.06
UBR4-214ENST00000486515 AOX1Q06278 1338 aa8.45□□□□□ -1.06
UBR4-214ENST00000486515 CACNA1SQ13698 1873 aa8.45□□□□□ -1.06
UBR4-214ENST00000486515 RIMBP2O15034 1052 aa8.44□□□□□ -1.06
UBR4-214ENST00000486515 SEMA3EO15041 775 aa8.44□□□□□ -1.06
UBR4-214ENST00000486515 PPIP5K2O43314 1243 aa8.44□□□□□ -1.06
UBR4-214ENST00000486515 AOC2O75106 756 aa8.44□□□□□ -1.06
UBR4-214ENST00000486515 PDE1AP54750 535 aa8.44□□□□□ -1.06
UBR4-214ENST00000486515 FKBP4Q02790 459 aaKnown RBP eCLIP8.44□□□□□ -1.06
UBR4-214ENST00000486515 ZSCAN25Q6NSZ9 544 aa8.44□□□□□ -1.06
UBR4-214ENST00000486515 LARGE2Q8N3Y3 721 aa8.44□□□□□ -1.06
UBR4-214ENST00000486515 ZGPATQ8N5A5 531 aaKnown RBP8.44□□□□□ -1.06
UBR4-214ENST00000486515 PSMD1Q99460 953 aa8.44□□□□□ -1.06
UBR4-214ENST00000486515 DNAJC2Q99543 621 aaKnown RBP8.44□□□□□ -1.06
UBR4-214ENST00000486515 DBNDD2Q9BQY9 259 aa8.44□□□□□ -1.06
UBR4-214ENST00000486515 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.44□□□□□ -1.061e-12■■■■□ 20
UBR4-214ENST00000486515 COA1Q9GZY4 146 aa8.44□□□□□ -1.06
UBR4-214ENST00000486515 PRDM6Q9NQX0 595 aa8.44□□□□□ -1.06
UBR4-214ENST00000486515 CACNA1AO00555 2505 aa8.44□□□□□ -1.06
UBR4-214ENST00000486515 CASP8AP2Q9UKL3 1982 aa8.44□□□□□ -1.06
UBR4-214ENST00000486515 THSD7BQ9C0I4 1608 aa8.43□□□□□ -1.06
UBR4-214ENST00000486515 NRXN2Q9P2S2 1712 aa8.43□□□□□ -1.06
UBR4-214ENST00000486515 A0A1B0GUL6 1792 aa8.43□□□□□ -1.06
UBR4-214ENST00000486515 TAF1P21675 1872 aa8.43□□□□□ -1.06
UBR4-214ENST00000486515 HIP1O00291 1037 aa8.43□□□□□ -1.06
UBR4-214ENST00000486515 ATP5JP18859 108 aa8.43□□□□□ -1.06
UBR4-214ENST00000486515 FGFR2P21802 821 aa8.43□□□□□ -1.06
UBR4-214ENST00000486515 GYG1P46976 350 aa8.43□□□□□ -1.06
UBR4-214ENST00000486515 SPTY2D1Q68D10 685 aaPredicted RBP8.43□□□□□ -1.06
UBR4-214ENST00000486515 CCDC102BQ68D86 513 aa8.43□□□□□ -1.06
UBR4-214ENST00000486515 PLEKHM2Q8IWE5 1019 aa8.43□□□□□ -1.06
UBR4-214ENST00000486515 NIM1KQ8IY84 436 aa8.43□□□□□ -1.06
UBR4-214ENST00000486515 VGLL2Q8N8G2 317 aa8.43□□□□□ -1.06
UBR4-214ENST00000486515 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.43□□□□□ -1.06
UBR4-214ENST00000486515 EVI5LQ96CN4 794 aa8.43□□□□□ -1.06
UBR4-214ENST00000486515 BOLA2Q9H3K6 86 aa8.43□□□□□ -1.06
UBR4-214ENST00000486515 STAP2Q9UGK3 403 aa8.43□□□□□ -1.06
UBR4-214ENST00000486515 DBNLQ9UJU6 430 aaKnown RBP8.43□□□□□ -1.06
UBR4-214ENST00000486515 MED23Q9ULK4 1368 aa8.43□□□□□ -1.06
UBR4-214ENST00000486515 BCAMP50895 628 aa8.42□□□□□ -1.06
UBR4-214ENST00000486515 CHAF1AQ13111 956 aaPredicted RBP8.42□□□□□ -1.06
UBR4-214ENST00000486515 TTC22Q5TAA0 569 aa8.42□□□□□ -1.06
UBR4-214ENST00000486515 C15orf52Q6ZUT6 534 aaKnown RBP8.42□□□□□ -1.06
UBR4-214ENST00000486515 PODNQ7Z5L7 613 aa8.42□□□□□ -1.06
UBR4-214ENST00000486515 SLF2Q8IX21 1173 aa8.42□□□□□ -1.06
UBR4-214ENST00000486515 SPATA5Q8NB90 893 aa8.42□□□□□ -1.06
UBR4-214ENST00000486515 WDR66Q8TBY9 1149 aa8.42□□□□□ -1.06
UBR4-214ENST00000486515 TBC1D22AQ8WUA7 517 aa8.42□□□□□ -1.06
UBR4-214ENST00000486515 RUFY2Q8WXA3 655 aa8.42□□□□□ -1.06
UBR4-214ENST00000486515 ZNF512BQ96KM6 892 aaPredicted RBP8.42□□□□□ -1.06
UBR4-214ENST00000486515 NOL10Q9BSC4 688 aaKnown RBP8.42□□□□□ -1.06
UBR4-214ENST00000486515 FSD1Q9BTV5 496 aa8.42□□□□□ -1.06
UBR4-214ENST00000486515 RTFDC1Q9BY42 306 aaPredicted RBP8.42□□□□□ -1.06
UBR4-214ENST00000486515 OSBPL3Q9H4L5 887 aa8.42□□□□□ -1.06
UBR4-214ENST00000486515 RNF216Q9NWF9 866 aaPredicted RBP8.42□□□□□ -1.06
UBR4-214ENST00000486515 TLR7Q9NYK1 1049 aaKnown RBP8.42□□□□□ -1.06
UBR4-214ENST00000486515 LRP2BPQ9P2M1 347 aa8.42□□□□□ -1.06
UBR4-214ENST00000486515 POLLQ9UGP5 575 aa8.42□□□□□ -1.06
UBR4-214ENST00000486515 ZNF609O15014 1411 aa8.42□□□□□ -1.06
UBR4-214ENST00000486515 MKI67P46013 3256 aaKnown RBP8.41□□□□□ -1.06
UBR4-214ENST00000486515 SNAP23O00161 211 aa8.41□□□□□ -1.06
UBR4-214ENST00000486515 COL9A1P20849 921 aa8.41□□□□□ -1.06
UBR4-214ENST00000486515 ARID4AP29374 1257 aaPredicted RBP8.41□□□□□ -1.06
UBR4-214ENST00000486515 ADORA1P30542 326 aa8.41□□□□□ -1.06
UBR4-214ENST00000486515 IARSP41252 1262 aaKnown RBP8.41□□□□□ -1.06
UBR4-214ENST00000486515 PHKA1P46020 1223 aa8.41□□□□□ -1.06
UBR4-214ENST00000486515 EIF6P56537 245 aaKnown RBP8.41□□□□□ -1.06
UBR4-214ENST00000486515 KIAA2012Q0VF49 1180 aa8.41□□□□□ -1.06
UBR4-214ENST00000486515 MAP3K12Q12852 859 aa8.41□□□□□ -1.06
UBR4-214ENST00000486515 AOC3Q16853 763 aa8.41□□□□□ -1.06
UBR4-214ENST00000486515 BMP2KLQ5H9B9 411 aa8.41□□□□□ -1.06
UBR4-214ENST00000486515 FAM84BQ96KN1 310 aaPredicted RBP8.41□□□□□ -1.06
UBR4-214ENST00000486515 UPF2Q9HAU5 1272 aaKnown RBP8.41□□□□□ -1.06
UBR4-214ENST00000486515 CD209Q9NNX6 404 aa8.41□□□□□ -1.06
UBR4-214ENST00000486515 ZNF277Q9NRM2 450 aaPredicted RBP8.41□□□□□ -1.06
UBR4-214ENST00000486515 DIAPH3Q9NSV4 1193 aa8.41□□□□□ -1.06
UBR4-214ENST00000486515 PAG1Q9NWQ8 432 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms