RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 EAF2Q96CJ1 260 aaPredicted RBP13.96□□□□□ -0.17
NUP50-216ENST00000486184 GPATCH3Q96I76 525 aa13.96□□□□□ -0.17
NUP50-216ENST00000486184 DBNDD2Q9BQY9 259 aa13.96□□□□□ -0.17
NUP50-216ENST00000486184 IQSEC3Q9UPP2 1182 aaPredicted RBP13.96□□□□□ -0.17
NUP50-216ENST00000486184 SCN4AP35499 1836 aa13.95□□□□□ -0.18
NUP50-216ENST00000486184 YDJCA8MPS7 323 aa13.95□□□□□ -0.18
NUP50-216ENST00000486184 SEMA3EO15041 775 aa13.95□□□□□ -0.18
NUP50-216ENST00000486184 UQCRFS1P1P0C7P4 283 aa13.95□□□□□ -0.18
NUP50-216ENST00000486184 PHKA1P46020 1223 aa13.95□□□□□ -0.18
NUP50-216ENST00000486184 GTF2IP78347 998 aa13.95□□□□□ -0.18
NUP50-216ENST00000486184 CXCL9Q07325 125 aa13.95□□□□□ -0.18
NUP50-216ENST00000486184 CHAF1AQ13111 956 aaPredicted RBP13.95□□□□□ -0.18
NUP50-216ENST00000486184 TTLL5Q6EMB2 1281 aa13.95□□□□□ -0.18
NUP50-216ENST00000486184 SMC5Q8IY18 1101 aa13.95□□□□□ -0.18
NUP50-216ENST00000486184 GPC2Q8N158 579 aa13.95□□□□□ -0.18
NUP50-216ENST00000486184 GLTPD2A6NH11 291 aa13.94□□□□□ -0.18
NUP50-216ENST00000486184 PSMD14O00487 310 aa13.94□□□□□ -0.18
NUP50-216ENST00000486184 YY1P25490 414 aa13.94□□□□□ -0.18
NUP50-216ENST00000486184 TDRD7Q8NHU6 1098 aaKnown RBP13.94□□□□□ -0.18
NUP50-216ENST00000486184 WDR90Q96KV7 1748 aa13.94□□□□□ -0.18
NUP50-216ENST00000486184 TLR7Q9NYK1 1049 aaKnown RBP13.94□□□□□ -0.18
NUP50-216ENST00000486184 DBNLQ9UJU6 430 aaKnown RBP13.94□□□□□ -0.18
NUP50-216ENST00000486184 DENND2AQ9ULE3 1009 aa13.94□□□□□ -0.18
NUP50-216ENST00000486184 AKAP11Q9UKA4 1901 aa13.94□□□□□ -0.18
NUP50-216ENST00000486184 MYO3BQ8WXR4 1341 aa13.93□□□□□ -0.18
NUP50-216ENST00000486184 LMOD1P29536 600 aaPredicted RBP13.93□□□□□ -0.18
NUP50-216ENST00000486184 STRIP1Q5VSL9 837 aa13.93□□□□□ -0.18
NUP50-216ENST00000486184 ZNF526Q8TF50 670 aaPredicted RBP13.93□□□□□ -0.18
NUP50-216ENST00000486184 KCNQ5Q9NR82 932 aa13.93□□□□□ -0.18
NUP50-216ENST00000486184 PPP4R2Q9NY27 417 aa13.93□□□□□ -0.18
NUP50-216ENST00000486184 JAG2Q9Y219 1238 aa13.93□□□□□ -0.18
NUP50-216ENST00000486184 DDNO94850 711 aaPredicted RBP13.92□□□□□ -0.18
NUP50-216ENST00000486184 RPS12P25398 132 aaKnown RBP13.92□□□□□ -0.18
NUP50-216ENST00000486184 ARID4AP29374 1257 aaPredicted RBP13.92□□□□□ -0.18
NUP50-216ENST00000486184 CENPQQ7L2Z9 268 aaPredicted RBP13.92□□□□□ -0.18
NUP50-216ENST00000486184 WDR66Q8TBY9 1149 aa13.92□□□□□ -0.18
NUP50-216ENST00000486184 TBC1D22AQ8WUA7 517 aa13.92□□□□□ -0.18
NUP50-216ENST00000486184 AK9Q5TCS8 1911 aa13.92□□□□□ -0.18
NUP50-216ENST00000486184 FAM205AQ6ZU69 1335 aa13.91□□□□□ -0.18
NUP50-216ENST00000486184 VIL1P09327 827 aaKnown RBP13.91□□□□□ -0.18
NUP50-216ENST00000486184 NUCB1Q02818 461 aa13.91□□□□□ -0.18
NUP50-216ENST00000486184 RASGRF1Q13972 1273 aa13.91□□□□□ -0.18
NUP50-216ENST00000486184 MFSD14BQ5SR56 506 aa13.91□□□□□ -0.18
NUP50-216ENST00000486184 RSBN1LQ6PCB5 846 aaPredicted RBP13.91□□□□□ -0.18
NUP50-216ENST00000486184 CHD1LQ86WJ1 897 aa13.91□□□□□ -0.18
NUP50-216ENST00000486184 ZGPATQ8N5A5 531 aaKnown RBP13.91□□□□□ -0.18
NUP50-216ENST00000486184 SPATA5Q8NB90 893 aa13.91□□□□□ -0.18
NUP50-216ENST00000486184 AGBL3Q8NEM8 1001 aa13.91□□□□□ -0.18
NUP50-216ENST00000486184 LNPKQ9C0E8 428 aa13.91□□□□□ -0.18
NUP50-216ENST00000486184 MAST2Q6P0Q8 1798 aa13.91□□□□□ -0.18
NUP50-216ENST00000486184 MYO5AQ9Y4I1 1855 aaKnown RBP13.91□□□□□ -0.18
NUP50-216ENST00000486184 PDS5AQ29RF7 1337 aaKnown RBP13.9□□□□□ -0.18
NUP50-216ENST00000486184 MYH7P12883 1935 aa13.9□□□□□ -0.18
NUP50-216ENST00000486184 IQCA1LA6NCM1 817 aa13.9□□□□□ -0.18
NUP50-216ENST00000486184 GMPSP49915 693 aaPredicted RBP13.9□□□□□ -0.18
NUP50-216ENST00000486184 FKBP1AP62942 108 aaKnown RBP13.9□□□□□ -0.18
NUP50-216ENST00000486184 DACT2Q5SW24 774 aa13.9□□□□□ -0.18
NUP50-216ENST00000486184 ZNF512BQ96KM6 892 aaPredicted RBP13.9□□□□□ -0.18
NUP50-216ENST00000486184 ECHDC1Q9NTX5 307 aa13.9□□□□□ -0.18
NUP50-216ENST00000486184 HDAC9Q9UKV0 1011 aa13.9□□□□□ -0.18
NUP50-216ENST00000486184 DOCK2Q92608 1830 aa13.9□□□□□ -0.18
NUP50-216ENST00000486184 COL1A1P02452 1464 aaPredicted RBP13.89□□□□□ -0.19
NUP50-216ENST00000486184 ERC2O15083 957 aa13.89□□□□□ -0.19
NUP50-216ENST00000486184 MX1P20591 662 aa13.89□□□□□ -0.19
NUP50-216ENST00000486184 MCAMP43121 646 aa13.89□□□□□ -0.19
NUP50-216ENST00000486184 OGFOD1Q8N543 542 aa13.89□□□□□ -0.19
NUP50-216ENST00000486184 GPBP1L1Q9HC44 474 aaPredicted RBP13.89□□□□□ -0.19
NUP50-216ENST00000486184 HMG20BQ9P0W2 317 aa13.89□□□□□ -0.19
NUP50-216ENST00000486184 MYH2Q9UKX2 1941 aa13.89□□□□□ -0.19
NUP50-216ENST00000486184 ECM29Q5VYK3 1845 aa13.89□□□□□ -0.19
NUP50-216ENST00000486184 MAST3O60307 1309 aa13.89□□□□□ -0.19
NUP50-216ENST00000486184 TTC41PQ6P2S7 1318 aa13.89□□□□□ -0.19
NUP50-216ENST00000486184 H7C1D1 291 aa13.88□□□□□ -0.19
NUP50-216ENST00000486184 SPTY2D1Q68D10 685 aaPredicted RBP13.88□□□□□ -0.19
NUP50-216ENST00000486184 KIAA0825Q8IV33 1275 aa13.88□□□□□ -0.19
NUP50-216ENST00000486184 C16orf71Q8IYS4 520 aaPredicted RBP13.88□□□□□ -0.19
NUP50-216ENST00000486184 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.88□□□□□ -0.19
NUP50-216ENST00000486184 DPF2Q92785 391 aa13.88□□□□□ -0.19
NUP50-216ENST00000486184 L3MBTL3Q96JM7 780 aaPredicted RBP13.88□□□□□ -0.19
NUP50-216ENST00000486184 DNAJC2Q99543 621 aaKnown RBP13.88□□□□□ -0.19
NUP50-216ENST00000486184 MXD3Q9BW11 206 aa13.88□□□□□ -0.19
NUP50-216ENST00000486184 SNRKQ9NRH2 765 aa13.88□□□□□ -0.19
NUP50-216ENST00000486184 ABCF2Q9UG63 623 aa13.88□□□□□ -0.19
NUP50-216ENST00000486184 HACL1Q9UJ83 578 aa13.88□□□□□ -0.19
NUP50-216ENST00000486184 SALL1Q9NSC2 1324 aa13.88□□□□□ -0.19
NUP50-216ENST00000486184 F8W031 263 aaPredicted RBP13.87□□□□□ -0.19
NUP50-216ENST00000486184 LDHBP07195 334 aaKnown RBP13.87□□□□□ -0.19
NUP50-216ENST00000486184 USP17L8P0C7I0 530 aa13.87□□□□□ -0.19
NUP50-216ENST00000486184 ATP5JP18859 108 aa13.87□□□□□ -0.19
NUP50-216ENST00000486184 SCARF1Q14162 830 aa13.87□□□□□ -0.19
NUP50-216ENST00000486184 TTF1Q15361 905 aaPredicted RBP13.87□□□□□ -0.19
NUP50-216ENST00000486184 PI16Q6UXB8 463 aa13.87□□□□□ -0.19
NUP50-216ENST00000486184 MICALL2Q8IY33 904 aa13.87□□□□□ -0.19
NUP50-216ENST00000486184 GPRC5DQ9NZD1 345 aa13.87□□□□□ -0.19
NUP50-216ENST00000486184 CNOT7Q9UIV1 285 aaKnown RBP13.87□□□□□ -0.19
NUP50-216ENST00000486184 ADAMTSL1Q8N6G6 1762 aa13.86□□□□□ -0.19
NUP50-216ENST00000486184 VEGFAP15692 232 aaPredicted RBP13.86□□□□□ -0.19
NUP50-216ENST00000486184 ZAP70P43403 619 aa13.86□□□□□ -0.19
NUP50-216ENST00000486184 MMP14P50281 582 aa13.86□□□□□ -0.19
NUP50-216ENST00000486184 SCNN1DP51172 638 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms