RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 CCDC85AQ96PX6 553 aaPredicted RBP9.42□□□□□ -0.9
SMC4-217ENST00000485867 DYRK1BQ9Y463 629 aa9.42□□□□□ -0.9
SMC4-217ENST00000485867 EDC4Q6P2E9 1401 aaKnown RBP9.41□□□□□ -0.9
SMC4-217ENST00000485867 SPATA31C2B4DYI2 1134 aa9.41□□□□□ -0.9
SMC4-217ENST00000485867 ARHGEF15O94989 841 aa9.41□□□□□ -0.9
SMC4-217ENST00000485867 MMP10P09238 476 aa9.41□□□□□ -0.9
SMC4-217ENST00000485867 RRAGCQ9HB90 399 aa9.41□□□□□ -0.9
SMC4-217ENST00000485867 CGNL1Q0VF96 1302 aa9.4□□□□□ -0.9
SMC4-217ENST00000485867 DPEP1P16444 411 aa9.4□□□□□ -0.9
SMC4-217ENST00000485867 SRSF11Q05519 484 aaKnown RBP9.4□□□□□ -0.9
SMC4-217ENST00000485867 IRF5Q13568 498 aa9.4□□□□□ -0.9
SMC4-217ENST00000485867 DBN1Q16643 649 aa9.4□□□□□ -0.9
SMC4-217ENST00000485867 NBPF10Q6P3W6 841 aaKnown RBP9.4□□□□□ -0.9
SMC4-217ENST00000485867 NBPF15Q8N660 670 aa9.4□□□□□ -0.9
SMC4-217ENST00000485867 SMARCC1Q92922 1105 aaPredicted RBP9.4□□□□□ -0.9
SMC4-217ENST00000485867 CCDC88AQ3V6T2 1871 aa9.4□□□□□ -0.91
SMC4-217ENST00000485867 MAP3K19Q56UN5 1328 aa9.39□□□□□ -0.91
SMC4-217ENST00000485867 GNRH1P01148 92 aa9.39□□□□□ -0.91
SMC4-217ENST00000485867 HOXC9P31274 260 aa9.39□□□□□ -0.91
SMC4-217ENST00000485867 WDR44Q5JSH3 913 aa9.39□□□□□ -0.91
SMC4-217ENST00000485867 MPRIPQ6WCQ1 1025 aa9.39□□□□□ -0.91
SMC4-217ENST00000485867 LINC00116Q8NCU8 138 aa9.39□□□□□ -0.91
SMC4-217ENST00000485867 RAB6BQ9NRW1 208 aa9.39□□□□□ -0.91
SMC4-217ENST00000485867 RNF181Q9P0P0 153 aa9.39□□□□□ -0.91
SMC4-217ENST00000485867 PCDH11XQ9BZA7 1347 aa9.38□□□□□ -0.91
SMC4-217ENST00000485867 PCDH11YQ9BZA8 1340 aa9.38□□□□□ -0.91
SMC4-217ENST00000485867 IL2RAP01589 272 aa9.38□□□□□ -0.91
SMC4-217ENST00000485867 TIAM2Q8IVF5 1701 aa9.38□□□□□ -0.91
SMC4-217ENST00000485867 LOC102724428A0A0B4J2F2 783 aa9.37□□□□□ -0.91
SMC4-217ENST00000485867 SIK1P57059 783 aa9.37□□□□□ -0.91
SMC4-217ENST00000485867 NBPF6Q5VWK0 638 aa9.37□□□□□ -0.91
SMC4-217ENST00000485867 LYPD4Q6UWN0 246 aa9.37□□□□□ -0.91
SMC4-217ENST00000485867 RIPOR1Q6ZS17 1223 aa9.37□□□□□ -0.91
SMC4-217ENST00000485867 HDGFL2Q7Z4V5 671 aaPredicted RBP9.37□□□□□ -0.91
SMC4-217ENST00000485867 PHTF2Q8N3S3 785 aa9.37□□□□□ -0.91
SMC4-217ENST00000485867 USHBP1Q8N6Y0 703 aa9.37□□□□□ -0.91
SMC4-217ENST00000485867 RAPGEF4Q8WZA2 1011 aa9.37□□□□□ -0.91
SMC4-217ENST00000485867 CNKSR1Q969H4 720 aa9.37□□□□□ -0.91
SMC4-217ENST00000485867 DCAF5Q96JK2 942 aa9.37□□□□□ -0.91
SMC4-217ENST00000485867 NBPF4Q96M43 638 aa9.37□□□□□ -0.91
SMC4-217ENST00000485867 ESYT1Q9BSJ8 1104 aa9.37□□□□□ -0.91
SMC4-217ENST00000485867 HRH3Q9Y5N1 445 aa9.37□□□□□ -0.91
SMC4-217ENST00000485867 A0A1W2PP64 1363 aa9.37□□□□□ -0.91
SMC4-217ENST00000485867 RTL1A6NKG5 1358 aa9.37□□□□□ -0.91
SMC4-217ENST00000485867 COL5A3P25940 1745 aaPredicted RBP9.36□□□□□ -0.91
SMC4-217ENST00000485867 GPR25O00155 361 aa9.36□□□□□ -0.91
SMC4-217ENST00000485867 CYP27B1O15528 508 aa9.36□□□□□ -0.91
SMC4-217ENST00000485867 MYCP01106 439 aaPredicted RBP9.36□□□□□ -0.91
SMC4-217ENST00000485867 TATP17735 454 aaPredicted RBP9.36□□□□□ -0.91
SMC4-217ENST00000485867 KCNA3P22001 575 aa9.36□□□□□ -0.91
SMC4-217ENST00000485867 AMPHP49418 695 aa9.36□□□□□ -0.91
SMC4-217ENST00000485867 ITPK1Q13572 414 aa9.36□□□□□ -0.91
SMC4-217ENST00000485867 TAS1R3Q7RTX0 852 aa9.36□□□□□ -0.91
SMC4-217ENST00000485867 PIGBQ92521 554 aa9.36□□□□□ -0.91
SMC4-217ENST00000485867 GAS2L1Q99501 681 aaPredicted RBP9.36□□□□□ -0.91
SMC4-217ENST00000485867 CCDC87Q9NVE4 849 aa9.36□□□□□ -0.91
SMC4-217ENST00000485867 ZNF831Q5JPB2 1677 aa9.36□□□□□ -0.91
SMC4-217ENST00000485867 MYH14Q7Z406 1995 aaKnown RBP9.35□□□□□ -0.91
SMC4-217ENST00000485867 H7C1W4 665 aa9.35□□□□□ -0.91
SMC4-217ENST00000485867 RNF225M0QZC1 329 aaPredicted RBP9.35□□□□□ -0.91
SMC4-217ENST00000485867 FOXN1O15353 648 aa9.35□□□□□ -0.91
SMC4-217ENST00000485867 KDM6AO15550 1401 aaPredicted RBP9.35□□□□□ -0.91
SMC4-217ENST00000485867 FBLN1P23142 703 aa9.35□□□□□ -0.91
SMC4-217ENST00000485867 EIF4G2P78344 907 aaKnown RBP eCLIP9.35□□□□□ -0.91
SMC4-217ENST00000485867 RASSF7Q02833 373 aa9.35□□□□□ -0.91
SMC4-217ENST00000485867 CENPCQ03188 943 aa9.35□□□□□ -0.91
SMC4-217ENST00000485867 TSGA10IPQ3SY00 556 aa9.35□□□□□ -0.91
SMC4-217ENST00000485867 TMC1Q8TDI8 760 aa9.35□□□□□ -0.91
SMC4-217ENST00000485867 PRM3Q9NNZ6 103 aa9.35□□□□□ -0.91
SMC4-217ENST00000485867 TIMMDC1Q9NPL8 285 aa9.35□□□□□ -0.91
SMC4-217ENST00000485867 PRDM10Q9NQV6 1147 aa9.35□□□□□ -0.91
SMC4-217ENST00000485867 MBIPQ9NS73 344 aa9.35□□□□□ -0.91
SMC4-217ENST00000485867 SMG6Q86US8 1419 aaKnown RBP9.34□□□□□ -0.91
SMC4-217ENST00000485867 VIRMAQ69YN4 1812 aaKnown RBP9.34□□□□□ -0.91
SMC4-217ENST00000485867 CELA2BP08218 269 aaPredicted RBP9.34□□□□□ -0.91
SMC4-217ENST00000485867 VEGFAP15692 232 aaPredicted RBP9.34□□□□□ -0.91
SMC4-217ENST00000485867 TMF1P82094 1093 aa9.34□□□□□ -0.91
SMC4-217ENST00000485867 FOXR1Q6PIV2 292 aa9.34□□□□□ -0.91
SMC4-217ENST00000485867 NLGN1Q8N2Q7 840 aa9.34□□□□□ -0.91
SMC4-217ENST00000485867 GTPBP3Q969Y2 492 aaKnown RBP9.34□□□□□ -0.91
SMC4-217ENST00000485867 XAGE2Q96GT9 111 aa9.34□□□□□ -0.91
SMC4-217ENST00000485867 SLC12A5Q9H2X9 1139 aa9.34□□□□□ -0.91
SMC4-217ENST00000485867 PIM2Q9P1W9 311 aa9.34□□□□□ -0.91
SMC4-217ENST00000485867 PDE4DIPQ5VU43 2346 aa9.34□□□□□ -0.91
SMC4-217ENST00000485867 ROCK2O75116 1388 aaKnown RBP9.34□□□□□ -0.91
SMC4-217ENST00000485867 DLEC1Q9Y238 1755 aa9.33□□□□□ -0.92
SMC4-217ENST00000485867 DALRD3Q5D0E6 543 aaKnown RBP9.33□□□□□ -0.92
SMC4-217ENST00000485867 TERF2IPQ9NYB0 399 aa9.33□□□□□ -0.92
SMC4-217ENST00000485867 KDRP35968 1356 aa9.33□□□□□ -0.92
SMC4-217ENST00000485867 DICER1Q9UPY3 1922 aaKnown RBP9.33□□□□□ -0.92
SMC4-217ENST00000485867 GLTPD2A6NH11 291 aa9.32□□□□□ -0.92
SMC4-217ENST00000485867 GDF11O95390 407 aa9.32□□□□□ -0.92
SMC4-217ENST00000485867 F11P03951 625 aa9.32□□□□□ -0.92
SMC4-217ENST00000485867 GYS1P13807 737 aa9.32□□□□□ -0.92
SMC4-217ENST00000485867 TMEM151AQ8N4L1 468 aa9.32□□□□□ -0.92
SMC4-217ENST00000485867 KCTD17Q8N5Z5 321 aa9.32□□□□□ -0.92
SMC4-217ENST00000485867 COG3Q96JB2 828 aa9.32□□□□□ -0.92
SMC4-217ENST00000485867 MKRN1Q9UHC7 482 aaKnown RBP9.32□□□□□ -0.92
SMC4-217ENST00000485867 ASAP1Q9ULH1 1129 aa9.32□□□□□ -0.92
SMC4-217ENST00000485867 DOLKQ9UPQ8 538 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms