RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 ZBED3Q96IU2 234 aaPredicted RBP17.32■□□□□ 0.36
SCAF4-206ENST00000485790 PPP2R3BQ9Y5P8 575 aa17.32■□□□□ 0.36
SCAF4-206ENST00000485790 PTPRCP08575 1304 aa17.31■□□□□ 0.36
SCAF4-206ENST00000485790 MROH5Q6ZUA9 1318 aa17.31■□□□□ 0.36
SCAF4-206ENST00000485790 TM4SF4P48230 202 aa17.31■□□□□ 0.36
SCAF4-206ENST00000485790 INHBEP58166 350 aa17.31■□□□□ 0.36
SCAF4-206ENST00000485790 MLLT1Q03111 559 aaPredicted RBP17.31■□□□□ 0.36
SCAF4-206ENST00000485790 SREBF2Q12772 1141 aa17.31■□□□□ 0.36
SCAF4-206ENST00000485790 PRKG1Q13976 671 aa17.31■□□□□ 0.36
SCAF4-206ENST00000485790 MRPL50Q8N5N7 158 aaKnown RBP17.31■□□□□ 0.36
SCAF4-206ENST00000485790 UNCXA6NJT0 531 aa17.3■□□□□ 0.36
SCAF4-206ENST00000485790 FRAT2O75474 233 aaPredicted RBP17.3■□□□□ 0.36
SCAF4-206ENST00000485790 NBPF7P0C2Y1 421 aaPredicted RBP17.3■□□□□ 0.36
SCAF4-206ENST00000485790 PTPN12Q05209 780 aaKnown RBP17.3■□□□□ 0.36
SCAF4-206ENST00000485790 CFAP100Q494V2 611 aa17.3■□□□□ 0.36
SCAF4-206ENST00000485790 CAVIN4Q5BKX8 364 aa17.3■□□□□ 0.36
SCAF4-206ENST00000485790 CERS5Q8N5B7 392 aa17.3■□□□□ 0.36
SCAF4-206ENST00000485790 ANGEL1Q9UNK9 670 aaKnown RBP17.3■□□□□ 0.36
SCAF4-206ENST00000485790 RGS19P49795 217 aa17.29■□□□□ 0.36
SCAF4-206ENST00000485790 LDLRAD1Q5T700 205 aa17.29■□□□□ 0.36
SCAF4-206ENST00000485790 TDRD7Q8NHU6 1098 aaKnown RBP17.29■□□□□ 0.36
SCAF4-206ENST00000485790 SUCLG2Q96I99 432 aa17.29■□□□□ 0.36
SCAF4-206ENST00000485790 PRMT6Q96LA8 375 aaPredicted RBP17.29■□□□□ 0.36
SCAF4-206ENST00000485790 RIPOR2Q9Y4F9 1068 aa17.29■□□□□ 0.36
SCAF4-206ENST00000485790 UTYO14607 1347 aa17.28■□□□□ 0.36
SCAF4-206ENST00000485790 FAM205AQ6ZU69 1335 aa17.28■□□□□ 0.36
SCAF4-206ENST00000485790 ZNF521Q96K83 1311 aa17.28■□□□□ 0.36
SCAF4-206ENST00000485790 IRS2Q9Y4H2 1338 aa17.28■□□□□ 0.36
SCAF4-206ENST00000485790 SPDYE2BA6NHP3 402 aa17.28■□□□□ 0.36
SCAF4-206ENST00000485790 ALDH1A1P00352 501 aa17.28■□□□□ 0.36
SCAF4-206ENST00000485790 SPDYE6P0CI01 402 aa17.28■□□□□ 0.36
SCAF4-206ENST00000485790 PKN2Q16513 984 aaKnown RBP17.28■□□□□ 0.36
SCAF4-206ENST00000485790 CTU1Q7Z7A3 348 aaKnown RBP17.28■□□□□ 0.36
SCAF4-206ENST00000485790 FAM84BQ96KN1 310 aaPredicted RBP17.28■□□□□ 0.36
SCAF4-206ENST00000485790 VEZTQ9HBM0 779 aa17.28■□□□□ 0.36
SCAF4-206ENST00000485790 SERPINA10Q9UK55 444 aa17.28■□□□□ 0.36
SCAF4-206ENST00000485790 HDAC5Q9UQL6 1122 aa17.28■□□□□ 0.36
SCAF4-206ENST00000485790 THSD7BQ9C0I4 1608 aa17.28■□□□□ 0.36
SCAF4-206ENST00000485790 GYG1P46976 350 aa17.27■□□□□ 0.36
SCAF4-206ENST00000485790 SLFN5Q08AF3 891 aa17.27■□□□□ 0.36
SCAF4-206ENST00000485790 TNFAIP1Q13829 316 aa17.27■□□□□ 0.36
SCAF4-206ENST00000485790 METTL24Q5JXM2 366 aa17.27■□□□□ 0.36
SCAF4-206ENST00000485790 MFSD14BQ5SR56 506 aa17.27■□□□□ 0.36
SCAF4-206ENST00000485790 PUS3Q9BZE2 481 aaKnown RBP17.27■□□□□ 0.36
SCAF4-206ENST00000485790 BICC1Q9H694 974 aaKnown RBP17.27■□□□□ 0.36
SCAF4-206ENST00000485790 TTF2Q9UNY4 1162 aaKnown RBP17.27■□□□□ 0.36
SCAF4-206ENST00000485790 JAG2Q9Y219 1238 aa17.27■□□□□ 0.36
SCAF4-206ENST00000485790 SCN9AQ15858 1988 aa17.26■□□□□ 0.35
SCAF4-206ENST00000485790 CLRN2A0PK11 232 aa17.26■□□□□ 0.35
SCAF4-206ENST00000485790 TBC1D8O95759 1140 aa17.26■□□□□ 0.35
SCAF4-206ENST00000485790 IREB2P48200 963 aaKnown RBP17.26■□□□□ 0.35
SCAF4-206ENST00000485790 MKRN3Q13064 507 aaKnown RBP17.26■□□□□ 0.35
SCAF4-206ENST00000485790 ALDH1L2Q3SY69 923 aa17.26■□□□□ 0.35
SCAF4-206ENST00000485790 RABL6Q3YEC7 729 aaPredicted RBP17.26■□□□□ 0.35
SCAF4-206ENST00000485790 SPRYD7Q5W111 196 aa17.26■□□□□ 0.35
SCAF4-206ENST00000485790 TBC1D22AQ8WUA7 517 aa17.26■□□□□ 0.35
SCAF4-206ENST00000485790 SSH1Q8WYL5 1049 aa17.26■□□□□ 0.35
SCAF4-206ENST00000485790 KAZALD1Q96I82 304 aa17.26■□□□□ 0.35
SCAF4-206ENST00000485790 MANSC4A6NHS7 340 aaPredicted RBP17.25■□□□□ 0.35
SCAF4-206ENST00000485790 PDE8BO95263 885 aa17.25■□□□□ 0.35
SCAF4-206ENST00000485790 RASA3Q14644 834 aa17.25■□□□□ 0.35
SCAF4-206ENST00000485790 OTUD7BQ6GQQ9 843 aa17.25■□□□□ 0.35
SCAF4-206ENST00000485790 FBXO33Q7Z6M2 555 aa17.25■□□□□ 0.35
SCAF4-206ENST00000485790 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.25■□□□□ 0.35
SCAF4-206ENST00000485790 TNNI2P48788 182 aa17.24■□□□□ 0.35
SCAF4-206ENST00000485790 MAP3K11Q16584 847 aa17.24■□□□□ 0.35
SCAF4-206ENST00000485790 NOM1Q5C9Z4 860 aaKnown RBP17.24■□□□□ 0.35
SCAF4-206ENST00000485790 USP44Q9H0E7 712 aa17.24■□□□□ 0.35
SCAF4-206ENST00000485790 GPR25O00155 361 aa17.23■□□□□ 0.35
SCAF4-206ENST00000485790 IFIT1P09914 478 aaKnown RBP17.23■□□□□ 0.35
SCAF4-206ENST00000485790 ZBTB48P10074 688 aaPredicted RBP17.23■□□□□ 0.35
SCAF4-206ENST00000485790 HDLBPQ00341 1268 aaKnown RBP17.23■□□□□ 0.35
SCAF4-206ENST00000485790 DZIP1LQ8IYY4 767 aaKnown RBP17.23■□□□□ 0.35
SCAF4-206ENST00000485790 MRIQ9BWK5 157 aa17.23■□□□□ 0.35
SCAF4-206ENST00000485790 SMC4Q9NTJ3 1288 aa17.23■□□□□ 0.35
SCAF4-206ENST00000485790 ZNF70Q9UC06 446 aaPredicted RBP17.23■□□□□ 0.35
SCAF4-206ENST00000485790 CT47B1P0C2W7 299 aaPredicted RBP17.22■□□□□ 0.35
SCAF4-206ENST00000485790 LRRC24Q50LG9 513 aa17.22■□□□□ 0.35
SCAF4-206ENST00000485790 NBPF12Q5TAG4 269 aaPredicted RBP17.22■□□□□ 0.35
SCAF4-206ENST00000485790 ANKRD13AQ8IZ07 590 aa17.22■□□□□ 0.35
SCAF4-206ENST00000485790 ANKRD44Q8N8A2 993 aa17.22■□□□□ 0.35
SCAF4-206ENST00000485790 ZNF296Q8WUU4 475 aaPredicted RBP17.22■□□□□ 0.35
SCAF4-206ENST00000485790 TDRD3Q9H7E2 651 aaKnown RBP17.22■□□□□ 0.35
SCAF4-206ENST00000485790 COL1A1P02452 1464 aaPredicted RBP17.22■□□□□ 0.35
SCAF4-206ENST00000485790 FKTNO75072 461 aa17.21■□□□□ 0.35
SCAF4-206ENST00000485790 USP2O75604 605 aaPredicted RBP17.21■□□□□ 0.35
SCAF4-206ENST00000485790 CRKP46108 304 aa17.21■□□□□ 0.35
SCAF4-206ENST00000485790 CHAF1AQ13111 956 aaPredicted RBP17.21■□□□□ 0.35
SCAF4-206ENST00000485790 SPDYE2Q495Y8 402 aa17.21■□□□□ 0.35
SCAF4-206ENST00000485790 PCDHAC2Q9Y5I4 1007 aa17.21■□□□□ 0.35
SCAF4-206ENST00000485790 POLR2AP24928 1970 aaKnown RBP17.2■□□□□ 0.34
SCAF4-206ENST00000485790 PAPPA2Q9BXP8 1791 aa17.2■□□□□ 0.34
SCAF4-206ENST00000485790 PUM3Q15397 648 aaKnown RBP17.2■□□□□ 0.34
SCAF4-206ENST00000485790 TEKT1Q969V4 418 aa17.2■□□□□ 0.34
SCAF4-206ENST00000485790 HOOK2Q96ED9 719 aa17.2■□□□□ 0.34
SCAF4-206ENST00000485790 CFHR5Q9BXR6 569 aa17.2■□□□□ 0.34
SCAF4-206ENST00000485790 TMOD2Q9NZR1 351 aa17.2■□□□□ 0.34
SCAF4-206ENST00000485790 SUGT1Q9Y2Z0 365 aa17.2■□□□□ 0.34
SCAF4-206ENST00000485790 EYA2O00167 538 aa17.19■□□□□ 0.34
SCAF4-206ENST00000485790 UBTFL1P0CB47 393 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms