RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 ZAP70P43403 619 aa17.25■□□□□ 0.35
SRSF6-202ENST00000483871 GTF2IP78347 998 aa17.25■□□□□ 0.35
SRSF6-202ENST00000483871 CHAF1AQ13111 956 aaPredicted RBP17.25■□□□□ 0.35
SRSF6-202ENST00000483871 C9orf131Q5VYM1 1079 aa17.25■□□□□ 0.35
SRSF6-202ENST00000483871 EDC3Q96F86 508 aaKnown RBP17.25■□□□□ 0.35
SRSF6-202ENST00000483871 ZNF512BQ96KM6 892 aaPredicted RBP17.25■□□□□ 0.35
SRSF6-202ENST00000483871 OSBPL3Q9H4L5 887 aa17.25■□□□□ 0.35
SRSF6-202ENST00000483871 RNF181Q9P0P0 153 aa17.25■□□□□ 0.35
SRSF6-202ENST00000483871 SCN9AQ15858 1988 aa17.24■□□□□ 0.35
SRSF6-202ENST00000483871 SPATA5Q8NB90 893 aa17.24■□□□□ 0.35
SRSF6-202ENST00000483871 FBXW7Q969H0 707 aa17.24■□□□□ 0.35
SRSF6-202ENST00000483871 DNAJC2Q99543 621 aaKnown RBP17.24■□□□□ 0.35
SRSF6-202ENST00000483871 ZNRF3Q9ULT6 936 aa17.24■□□□□ 0.35
SRSF6-202ENST00000483871 COL1A1P02452 1464 aaPredicted RBP17.24■□□□□ 0.35
SRSF6-202ENST00000483871 AKAP11Q9UKA4 1901 aa17.24■□□□□ 0.35
SRSF6-202ENST00000483871 ERC2O15083 957 aa17.23■□□□□ 0.35
SRSF6-202ENST00000483871 RAD17O75943 681 aa17.23■□□□□ 0.35
SRSF6-202ENST00000483871 TTLL5Q6EMB2 1281 aa17.23■□□□□ 0.35
SRSF6-202ENST00000483871 MXD3Q9BW11 206 aa17.23■□□□□ 0.35
SRSF6-202ENST00000483871 ANTXR1Q9H6X2 564 aa17.23■□□□□ 0.35
SRSF6-202ENST00000483871 DENND2AQ9ULE3 1009 aa17.23■□□□□ 0.35
SRSF6-202ENST00000483871 GLRX3O76003 335 aaKnown RBP17.23■□□□□ 0.35
SRSF6-202ENST00000483871 TBC1D9Q6ZT07 1266 aa17.23■□□□□ 0.35
SRSF6-202ENST00000483871 DCAF8L1A6NGE4 600 aa17.22■□□□□ 0.35
SRSF6-202ENST00000483871 FZD9O00144 591 aa17.22■□□□□ 0.35
SRSF6-202ENST00000483871 CYP2E1P05181 493 aaPredicted RBP17.22■□□□□ 0.35
SRSF6-202ENST00000483871 CXCL9Q07325 125 aa17.22■□□□□ 0.35
SRSF6-202ENST00000483871 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.22■□□□□ 0.35
SRSF6-202ENST00000483871 HAUS7Q99871 368 aa17.22■□□□□ 0.35
SRSF6-202ENST00000483871 GOLIM4O00461 696 aa17.21■□□□□ 0.35
SRSF6-202ENST00000483871 PSMD14O00487 310 aa17.21■□□□□ 0.35
SRSF6-202ENST00000483871 SEMA3EO15041 775 aa17.21■□□□□ 0.35
SRSF6-202ENST00000483871 DICER1Q9UPY3 1922 aaKnown RBP17.21■□□□□ 0.35
SRSF6-202ENST00000483871 USP17L3A6NCW0 530 aa17.2■□□□□ 0.34
SRSF6-202ENST00000483871 USP17L4A6NCW7 530 aa17.2■□□□□ 0.34
SRSF6-202ENST00000483871 GSPT1P15170 499 aaKnown RBP17.2■□□□□ 0.34
SRSF6-202ENST00000483871 GRIK5Q16478 980 aa17.2■□□□□ 0.34
SRSF6-202ENST00000483871 USP17L1Q7RTZ2 530 aa17.2■□□□□ 0.34
SRSF6-202ENST00000483871 ABCF2Q9UG63 623 aa17.2■□□□□ 0.34
SRSF6-202ENST00000483871 AOX1Q06278 1338 aa17.2■□□□□ 0.34
SRSF6-202ENST00000483871 FAM205AQ6ZU69 1335 aa17.2■□□□□ 0.34
SRSF6-202ENST00000483871 MYH13Q9UKX3 1938 aa17.2■□□□□ 0.34
SRSF6-202ENST00000483871 TTC22Q5TAA0 569 aa17.2■□□□□ 0.34
SRSF6-202ENST00000483871 STRIP1Q5VSL9 837 aa17.2■□□□□ 0.34
SRSF6-202ENST00000483871 CERS5Q8N5B7 392 aa17.2■□□□□ 0.34
SRSF6-202ENST00000483871 ZBTB12Q9Y330 459 aaPredicted RBP17.2■□□□□ 0.34
SRSF6-202ENST00000483871 ZNF541Q9H0D2 1346 aa17.19■□□□□ 0.34
SRSF6-202ENST00000483871 ZBTB22O15209 634 aa17.19■□□□□ 0.34
SRSF6-202ENST00000483871 EIF6P56537 245 aaKnown RBP17.19■□□□□ 0.34
SRSF6-202ENST00000483871 MFSD14BQ5SR56 506 aa17.19■□□□□ 0.34
SRSF6-202ENST00000483871 DACT2Q5SW24 774 aa17.19■□□□□ 0.34
SRSF6-202ENST00000483871 CIAPIN1Q6FI81 312 aa17.19■□□□□ 0.34
SRSF6-202ENST00000483871 PIH1D3Q9NQM4 214 aaKnown RBP17.19■□□□□ 0.34
SRSF6-202ENST00000483871 PAG1Q9NWQ8 432 aa17.19■□□□□ 0.34
SRSF6-202ENST00000483871 VIL1P09327 827 aaKnown RBP17.18■□□□□ 0.34
SRSF6-202ENST00000483871 PRDX5P30044 214 aa17.18■□□□□ 0.34
SRSF6-202ENST00000483871 WDR66Q8TBY9 1149 aa17.18■□□□□ 0.34
SRSF6-202ENST00000483871 RILPL2Q969X0 211 aa17.18■□□□□ 0.34
SRSF6-202ENST00000483871 MYO5AQ9Y4I1 1855 aaKnown RBP17.17■□□□□ 0.34
SRSF6-202ENST00000483871 TRIM6-TRIM34B2RNG4 842 aa17.17■□□□□ 0.34
SRSF6-202ENST00000483871 GJA3Q9Y6H8 435 aa17.17■□□□□ 0.34
SRSF6-202ENST00000483871 F8W031 263 aaPredicted RBP17.16■□□□□ 0.34
SRSF6-202ENST00000483871 CHGBP05060 677 aa17.16■□□□□ 0.34
SRSF6-202ENST00000483871 PDS5AQ29RF7 1337 aaKnown RBP17.16■□□□□ 0.34
SRSF6-202ENST00000483871 DDNO94850 711 aaPredicted RBP17.16■□□□□ 0.34
SRSF6-202ENST00000483871 SDSP20132 328 aa17.16■□□□□ 0.34
SRSF6-202ENST00000483871 RSBN1LQ6PCB5 846 aaPredicted RBP17.16■□□□□ 0.34
SRSF6-202ENST00000483871 LRP2BPQ9P2M1 347 aa17.16■□□□□ 0.34
SRSF6-202ENST00000483871 ZNF646O15015 1829 aaPredicted RBP17.16■□□□□ 0.34
SRSF6-202ENST00000483871 SALL1Q9NSC2 1324 aa17.15■□□□□ 0.34
SRSF6-202ENST00000483871 IDH1O75874 414 aaKnown RBP17.15■□□□□ 0.34
SRSF6-202ENST00000483871 TNIP1Q15025 636 aa17.15■□□□□ 0.34
SRSF6-202ENST00000483871 SLFNL1Q499Z3 407 aa17.15■□□□□ 0.34
SRSF6-202ENST00000483871 KIAA0825Q8IV33 1275 aa17.15■□□□□ 0.34
SRSF6-202ENST00000483871 TBC1D22AQ8WUA7 517 aa17.15■□□□□ 0.34
SRSF6-202ENST00000483871 PSME4Q14997 1843 aa17.15■□□□□ 0.34
SRSF6-202ENST00000483871 TIAM2Q8IVF5 1701 aa17.14■□□□□ 0.33
SRSF6-202ENST00000483871 TTF1Q15361 905 aaPredicted RBP17.14■□□□□ 0.33
SRSF6-202ENST00000483871 ERICH6Q7L0X2 663 aa17.14■□□□□ 0.33
SRSF6-202ENST00000483871 ZNF384Q8TF68 577 aa17.14■□□□□ 0.33
SRSF6-202ENST00000483871 EVI5LQ96CN4 794 aa17.14■□□□□ 0.33
SRSF6-202ENST00000483871 RAI14Q9P0K7 980 aa17.14■□□□□ 0.33
SRSF6-202ENST00000483871 LDHBP07195 334 aaKnown RBP17.13■□□□□ 0.33
SRSF6-202ENST00000483871 CNTROBQ8N137 903 aa17.13■□□□□ 0.33
SRSF6-202ENST00000483871 KBTBD3Q8NAB2 608 aa17.13■□□□□ 0.33
SRSF6-202ENST00000483871 GMLQ99445 158 aa17.13■□□□□ 0.33
SRSF6-202ENST00000483871 SHTN1A0MZ66 631 aa17.13■□□□□ 0.33
SRSF6-202ENST00000483871 SCNN1DP51172 638 aa17.13■□□□□ 0.33
SRSF6-202ENST00000483871 FKBP1AP62942 108 aaKnown RBP17.13■□□□□ 0.33
SRSF6-202ENST00000483871 BMP2KLQ5H9B9 411 aa17.13■□□□□ 0.33
SRSF6-202ENST00000483871 ZGPATQ8N5A5 531 aaKnown RBP17.13■□□□□ 0.33
SRSF6-202ENST00000483871 FSD1Q9BTV5 496 aa17.13■□□□□ 0.33
SRSF6-202ENST00000483871 TTF2Q9UNY4 1162 aaKnown RBP17.13■□□□□ 0.33
SRSF6-202ENST00000483871 GMPSP49915 693 aaPredicted RBP17.12■□□□□ 0.33
SRSF6-202ENST00000483871 MECOMQ03112 1051 aa17.12■□□□□ 0.33
SRSF6-202ENST00000483871 DPY19L2Q6NUT2 758 aa17.12■□□□□ 0.33
SRSF6-202ENST00000483871 GPC2Q8N158 579 aa17.12■□□□□ 0.33
SRSF6-202ENST00000483871 NSUN4Q96CB9 384 aaKnown RBP17.12■□□□□ 0.33
SRSF6-202ENST00000483871 DIXDC1Q155Q3 683 aa17.11■□□□□ 0.33
SRSF6-202ENST00000483871 SLC9C2Q5TAH2 1124 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms