RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 CARMIL3Q8ND23 1372 aa15.73■□□□□ 0.11
CPNE1-225ENST00000483495 ZNF532Q9HCE3 1301 aa15.72■□□□□ 0.11
CPNE1-225ENST00000483495 A0A0G2JLW4 131 aa15.72■□□□□ 0.11
CPNE1-225ENST00000483495 SYT1P21579 422 aa15.72■□□□□ 0.11
CPNE1-225ENST00000483495 GJB2P29033 226 aa15.72■□□□□ 0.11
CPNE1-225ENST00000483495 RPS8P62241 208 aaKnown RBP15.72■□□□□ 0.11
CPNE1-225ENST00000483495 KLHL40Q2TBA0 621 aa15.72■□□□□ 0.11
CPNE1-225ENST00000483495 TTLL5Q6EMB2 1281 aa15.72■□□□□ 0.11
CPNE1-225ENST00000483495 Q6ZUG5 572 aa15.72■□□□□ 0.11
CPNE1-225ENST00000483495 NECAB1Q8N987 351 aa15.72■□□□□ 0.11
CPNE1-225ENST00000483495 DOCK2Q92608 1830 aa15.72■□□□□ 0.11
CPNE1-225ENST00000483495 STX6O43752 255 aa15.71■□□□□ 0.11
CPNE1-225ENST00000483495 TM4SF1P30408 202 aa15.71■□□□□ 0.11
CPNE1-225ENST00000483495 MAP3K12Q12852 859 aa15.71■□□□□ 0.11
CPNE1-225ENST00000483495 IMMTQ16891 758 aaKnown RBP15.71■□□□□ 0.11
CPNE1-225ENST00000483495 PHF14O94880 888 aa15.71■□□□□ 0.11
CPNE1-225ENST00000483495 ZSCAN22P10073 491 aaPredicted RBP15.71■□□□□ 0.11
CPNE1-225ENST00000483495 NFIXQ14938 502 aa15.71■□□□□ 0.11
CPNE1-225ENST00000483495 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.7■□□□□ 0.1
CPNE1-225ENST00000483495 FOXD4L5Q5VV16 416 aaPredicted RBP15.7■□□□□ 0.1
CPNE1-225ENST00000483495 FOXD4L4Q8WXT5 416 aaPredicted RBP15.7■□□□□ 0.1
CPNE1-225ENST00000483495 GTF3C6Q969F1 213 aa15.7■□□□□ 0.1
CPNE1-225ENST00000483495 UBR3Q6ZT12 1888 aa15.7■□□□□ 0.1
CPNE1-225ENST00000483495 ZMYM6O95789 1325 aa15.7■□□□□ 0.1
CPNE1-225ENST00000483495 BRWD3Q6RI45 1802 aa15.7■□□□□ 0.1
CPNE1-225ENST00000483495 ZBTB22O15209 634 aa15.69■□□□□ 0.1
CPNE1-225ENST00000483495 HMGB2P26583 209 aaKnown RBP15.69■□□□□ 0.1
CPNE1-225ENST00000483495 ALX1Q15699 326 aa15.69■□□□□ 0.1
CPNE1-225ENST00000483495 STRBPQ96SI9 672 aaKnown RBP15.69■□□□□ 0.1
CPNE1-225ENST00000483495 GNL3LQ9NVN8 582 aaKnown RBP15.69■□□□□ 0.1
CPNE1-225ENST00000483495 LAMA4Q16363 1823 aa15.69■□□□□ 0.1
CPNE1-225ENST00000483495 BRF1Q92994 677 aa15.69■□□□□ 0.1
CPNE1-225ENST00000483495 ANKRD2Q9GZV1 360 aa15.69■□□□□ 0.1
CPNE1-225ENST00000483495 GZF1Q9H116 711 aaPredicted RBP15.69■□□□□ 0.1
CPNE1-225ENST00000483495 MTMR6Q9Y217 621 aa15.69■□□□□ 0.1
CPNE1-225ENST00000483495 DDX49Q9Y6V7 483 aaKnown RBP15.69■□□□□ 0.1
CPNE1-225ENST00000483495 MYO5AQ9Y4I1 1855 aaKnown RBP15.68■□□□□ 0.1
CPNE1-225ENST00000483495 FSD2A1L4K1 749 aa15.68■□□□□ 0.1
CPNE1-225ENST00000483495 PFKFB2O60825 505 aa15.68■□□□□ 0.1
CPNE1-225ENST00000483495 TRIM37O94972 964 aa15.68■□□□□ 0.1
CPNE1-225ENST00000483495 MAGEB6Q8N7X4 407 aa15.68■□□□□ 0.1
CPNE1-225ENST00000483495 TAF1P21675 1872 aa15.68■□□□□ 0.1
CPNE1-225ENST00000483495 ZNF213O14771 459 aa15.67■□□□□ 0.1
CPNE1-225ENST00000483495 PRPF40AO75400 957 aaKnown RBP15.67■□□□□ 0.1
CPNE1-225ENST00000483495 F13A1P00488 732 aa15.67■□□□□ 0.1
CPNE1-225ENST00000483495 GYS1P13807 737 aa15.67■□□□□ 0.1
CPNE1-225ENST00000483495 PDCP20941 246 aa15.67■□□□□ 0.1
CPNE1-225ENST00000483495 GYG1P46976 350 aa15.67■□□□□ 0.1
CPNE1-225ENST00000483495 EVCP57679 992 aa15.67■□□□□ 0.1
CPNE1-225ENST00000483495 CAVIN4Q5BKX8 364 aa15.67■□□□□ 0.1
CPNE1-225ENST00000483495 FBXO33Q7Z6M2 555 aa15.67■□□□□ 0.1
CPNE1-225ENST00000483495 AIDAQ96BJ3 306 aa15.67■□□□□ 0.1
CPNE1-225ENST00000483495 CHAMP1Q96JM3 812 aa15.67■□□□□ 0.1
CPNE1-225ENST00000483495 FAM84BQ96KN1 310 aaPredicted RBP15.67■□□□□ 0.1
CPNE1-225ENST00000483495 TNRC6CQ9HCJ0 1690 aaKnown RBP15.67■□□□□ 0.1
CPNE1-225ENST00000483495 PDS5AQ29RF7 1337 aaKnown RBP15.67■□□□□ 0.1
CPNE1-225ENST00000483495 WDR19Q8NEZ3 1342 aa15.67■□□□□ 0.1
CPNE1-225ENST00000483495 WTIPA6NIX2 430 aaPredicted RBP15.67■□□□□ 0.1
CPNE1-225ENST00000483495 SEMA3EO15041 775 aa15.67■□□□□ 0.1
CPNE1-225ENST00000483495 RBM6P78332 1123 aaKnown RBP15.67■□□□□ 0.1
CPNE1-225ENST00000483495 ZNF772Q68DY9 489 aaPredicted RBP15.67■□□□□ 0.1
CPNE1-225ENST00000483495 MB21D2Q8IYB1 491 aaPredicted RBP15.67■□□□□ 0.1
CPNE1-225ENST00000483495 CNBD1Q8NA66 436 aa15.67■□□□□ 0.1
CPNE1-225ENST00000483495 LLPHQ9BRT6 129 aaKnown RBP15.67■□□□□ 0.1
CPNE1-225ENST00000483495 LRRC2Q9BYS8 371 aa15.67■□□□□ 0.1
CPNE1-225ENST00000483495 ISY1Q9ULR0 285 aaKnown RBP15.67■□□□□ 0.1
CPNE1-225ENST00000483495 ATP6V1DQ9Y5K8 247 aa15.67■□□□□ 0.1
CPNE1-225ENST00000483495 PNPLA7Q6ZV29 1317 aa15.66■□□□□ 0.1
CPNE1-225ENST00000483495 COL1A1P02452 1464 aaPredicted RBP15.66■□□□□ 0.1
CPNE1-225ENST00000483495 PATL2C9JE40 543 aaKnown RBP15.66■□□□□ 0.1
CPNE1-225ENST00000483495 HAND2P61296 217 aa15.66■□□□□ 0.1
CPNE1-225ENST00000483495 FGD1P98174 961 aa15.66■□□□□ 0.1
CPNE1-225ENST00000483495 CCDC24Q8N4L8 307 aa15.66■□□□□ 0.1
CPNE1-225ENST00000483495 TMEM87AQ8NBN3 555 aa15.66■□□□□ 0.1
CPNE1-225ENST00000483495 ZNF274Q96GC6 653 aaPredicted RBP15.66■□□□□ 0.1
CPNE1-225ENST00000483495 NBPF3Q9H094 633 aa15.66■□□□□ 0.1
CPNE1-225ENST00000483495 DENND2AQ9ULE3 1009 aa15.66■□□□□ 0.1
CPNE1-225ENST00000483495 SCRN1Q12765 414 aa15.65■□□□□ 0.1
CPNE1-225ENST00000483495 STK3Q13188 491 aa15.65■□□□□ 0.1
CPNE1-225ENST00000483495 PROM2Q8N271 834 aa15.65■□□□□ 0.1
CPNE1-225ENST00000483495 NCOA7Q8NI08 942 aa15.65■□□□□ 0.1
CPNE1-225ENST00000483495 MBD4O95243 580 aa15.65■□□□□ 0.1
CPNE1-225ENST00000483495 GNAT2P19087 354 aa15.65■□□□□ 0.1
CPNE1-225ENST00000483495 MCM5P33992 734 aa15.65■□□□□ 0.1
CPNE1-225ENST00000483495 GRAPQ13588 217 aa15.65■□□□□ 0.1
CPNE1-225ENST00000483495 LARP1BQ659C4 914 aaKnown RBP15.65■□□□□ 0.1
CPNE1-225ENST00000483495 PRR5LQ6MZQ0 368 aa15.65■□□□□ 0.1
CPNE1-225ENST00000483495 SMARCC2Q8TAQ2 1214 aa15.65■□□□□ 0.1
CPNE1-225ENST00000483495 GRAPLQ8TC17 118 aaPredicted RBP15.65■□□□□ 0.1
CPNE1-225ENST00000483495 GPT2Q8TD30 523 aa15.65■□□□□ 0.1
CPNE1-225ENST00000483495 LRP2BPQ9P2M1 347 aa15.65■□□□□ 0.1
CPNE1-225ENST00000483495 IRS2Q9Y4H2 1338 aa15.65■□□□□ 0.1
CPNE1-225ENST00000483495 NPHP1O15259 732 aa15.64■□□□□ 0.09
CPNE1-225ENST00000483495 APOBRQ0VD83 1088 aa15.64■□□□□ 0.09
CPNE1-225ENST00000483495 TXNRD1Q16881 649 aa15.64■□□□□ 0.09
CPNE1-225ENST00000483495 L1TD1Q5T7N2 865 aaKnown RBP15.64■□□□□ 0.09
CPNE1-225ENST00000483495 CHMP4CQ96CF2 233 aa15.64■□□□□ 0.09
CPNE1-225ENST00000483495 GOLGA6L3A6NEY3 463 aa15.63■□□□□ 0.09
CPNE1-225ENST00000483495 MBD3O95983 291 aa15.63■□□□□ 0.09
CPNE1-225ENST00000483495 ANTXR2P58335 489 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms