RNA–Protein interactions for RNA: ENST00000481965.6

SEC22A-207, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22A, Length 673 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-207ENST00000481965 SOGA3Q5TF21 947 aa9.82□□□□□ -0.84
SEC22A-207ENST00000481965 GOLM1Q8NBJ4 401 aa9.82□□□□□ -0.84
SEC22A-207ENST00000481965 SPACA7Q96KW9 195 aa9.82□□□□□ -0.84
SEC22A-207ENST00000481965 DNAJB12Q9NXW2 375 aaKnown RBP9.82□□□□□ -0.84
SEC22A-207ENST00000481965 TBX22Q9Y458 520 aa9.82□□□□□ -0.84
SEC22A-207ENST00000481965 TLDC2A0PJX2 215 aa9.8□□□□□ -0.84
SEC22A-207ENST00000481965 SSBP05455 408 aaKnown RBP eCLIP9.8□□□□□ -0.84
SEC22A-207ENST00000481965 HSP90B1P14625 803 aaKnown RBP9.8□□□□□ -0.84
SEC22A-207ENST00000481965 ZNF157P51786 506 aaPredicted RBP9.8□□□□□ -0.84
SEC22A-207ENST00000481965 RPS26P62854 115 aaKnown RBP9.8□□□□□ -0.84
SEC22A-207ENST00000481965 SNAP47Q5SQN1 464 aa9.8□□□□□ -0.84
SEC22A-207ENST00000481965 PCNX4Q63HM2 1172 aa9.8□□□□□ -0.84
SEC22A-207ENST00000481965 SYT9Q86SS6 491 aa9.8□□□□□ -0.84
SEC22A-207ENST00000481965 TRIM47Q96LD4 638 aa9.8□□□□□ -0.84
SEC22A-207ENST00000481965 PCDHB5Q9Y5E4 795 aa9.8□□□□□ -0.84
SEC22A-207ENST00000481965 MRVI1Q9Y6F6 885 aa9.8□□□□□ -0.84
SEC22A-207ENST00000481965 BMP6P22004 513 aa9.79□□□□□ -0.84
SEC22A-207ENST00000481965 NFX1Q12986 1120 aaKnown RBP9.79□□□□□ -0.84
SEC22A-207ENST00000481965 BNC2Q6ZN30 1099 aaPredicted RBP9.79□□□□□ -0.84
SEC22A-207ENST00000481965 FAM196AQ6ZSG2 479 aa9.79□□□□□ -0.84
SEC22A-207ENST00000481965 SLITRK4Q8IW52 837 aa9.79□□□□□ -0.84
SEC22A-207ENST00000481965 NLGN1Q8N2Q7 840 aa9.79□□□□□ -0.84
SEC22A-207ENST00000481965 FBXO27Q8NI29 283 aa9.79□□□□□ -0.84
SEC22A-207ENST00000481965 IGFLR1Q9H665 355 aa9.79□□□□□ -0.84
SEC22A-207ENST00000481965 GPN3Q9UHW5 284 aaPredicted RBP9.79□□□□□ -0.84
SEC22A-207ENST00000481965 PHF24Q9UPV7 400 aa9.79□□□□□ -0.84
SEC22A-207ENST00000481965 NEUROD1Q13562 356 aa9.78□□□□□ -0.84
SEC22A-207ENST00000481965 COL9A2Q14055 689 aaPredicted RBP9.78□□□□□ -0.84
SEC22A-207ENST00000481965 BMS1Q14692 1282 aaKnown RBP9.78□□□□□ -0.84
SEC22A-207ENST00000481965 ZNF423Q2M1K9 1284 aa9.78□□□□□ -0.84
SEC22A-207ENST00000481965 ZNF468Q5VIY5 522 aaPredicted RBP9.78□□□□□ -0.84
SEC22A-207ENST00000481965 ZNF746Q6NUN9 644 aaPredicted RBP9.78□□□□□ -0.84
SEC22A-207ENST00000481965 ZNF662Q6ZS27 426 aa9.78□□□□□ -0.84
SEC22A-207ENST00000481965 VN1R5Q7Z5H4 357 aa9.78□□□□□ -0.84
SEC22A-207ENST00000481965 TRIM42Q8IWZ5 723 aa9.78□□□□□ -0.84
SEC22A-207ENST00000481965 STK35Q8TDR2 534 aa9.78□□□□□ -0.84
SEC22A-207ENST00000481965 UBE2OQ9C0C9 1292 aaKnown RBP9.78□□□□□ -0.84
SEC22A-207ENST00000481965 TMEM39AQ9NV64 488 aa9.78□□□□□ -0.84
SEC22A-207ENST00000481965 GMPR2Q9P2T1 348 aaKnown RBP9.78□□□□□ -0.84
SEC22A-207ENST00000481965 KLF15Q9UIH9 416 aa9.78□□□□□ -0.84
SEC22A-207ENST00000481965 NAGPAQ9UK23 515 aa9.78□□□□□ -0.84
SEC22A-207ENST00000481965 SOX13Q9UN79 622 aa9.78□□□□□ -0.84
SEC22A-207ENST00000481965 KLF4O43474 513 aa9.77□□□□□ -0.85
SEC22A-207ENST00000481965 SIN3BO75182 1162 aa9.77□□□□□ -0.85
SEC22A-207ENST00000481965 F13A1P00488 732 aa9.77□□□□□ -0.85
SEC22A-207ENST00000481965 EIF2AK2P19525 551 aaKnown RBP9.77□□□□□ -0.85
SEC22A-207ENST00000481965 APOBRQ0VD83 1088 aa9.77□□□□□ -0.85
SEC22A-207ENST00000481965 CEP135Q66GS9 1140 aa9.77□□□□□ -0.85
SEC22A-207ENST00000481965 CKAP2LQ8IYA6 745 aa9.77□□□□□ -0.85
SEC22A-207ENST00000481965 KIFC2Q96AC6 838 aa9.77□□□□□ -0.85
SEC22A-207ENST00000481965 CLEC4MQ9H2X3 399 aaPredicted RBP9.77□□□□□ -0.85
SEC22A-207ENST00000481965 SENP2Q9HC62 589 aa9.77□□□□□ -0.85
SEC22A-207ENST00000481965 STRIP2Q9ULQ0 834 aa9.77□□□□□ -0.85
SEC22A-207ENST00000481965 TMA7Q9Y2S6 64 aaKnown RBP9.77□□□□□ -0.85
SEC22A-207ENST00000481965 FAM221AA4D161 298 aa9.76□□□□□ -0.85
SEC22A-207ENST00000481965 PPFIA3O75145 1194 aa9.76□□□□□ -0.85
SEC22A-207ENST00000481965 B3GALT4O96024 378 aa9.76□□□□□ -0.85
SEC22A-207ENST00000481965 GHRHP01286 108 aa9.76□□□□□ -0.85
SEC22A-207ENST00000481965 SNRPBP14678 240 aaKnown RBP9.76□□□□□ -0.85
SEC22A-207ENST00000481965 PCBP4P57723 403 aaKnown RBP9.76□□□□□ -0.85
SEC22A-207ENST00000481965 TBC1D8BQ0IIM8 1120 aa9.76□□□□□ -0.85
SEC22A-207ENST00000481965 NBPF6Q5VWK0 638 aa9.76□□□□□ -0.85
SEC22A-207ENST00000481965 ANKS3Q6ZW76 656 aa9.76□□□□□ -0.85
SEC22A-207ENST00000481965 JAZF1Q86VZ6 243 aa9.76□□□□□ -0.85
SEC22A-207ENST00000481965 BSNDQ8WZ55 320 aa9.76□□□□□ -0.85
SEC22A-207ENST00000481965 NKD1Q969G9 470 aa9.76□□□□□ -0.85
SEC22A-207ENST00000481965 PLD4Q96BZ4 506 aa9.76□□□□□ -0.85
SEC22A-207ENST00000481965 SHDQ96IW2 340 aa9.76□□□□□ -0.85
SEC22A-207ENST00000481965 NBPF4Q96M43 638 aa9.76□□□□□ -0.85
SEC22A-207ENST00000481965 MDFIQ99750 246 aa9.76□□□□□ -0.85
SEC22A-207ENST00000481965 LRRC3Q9BY71 257 aa9.76□□□□□ -0.85
SEC22A-207ENST00000481965 PRR12Q9ULL5 1215 aa9.76□□□□□ -0.85
SEC22A-207ENST00000481965 CDK11AQ9UQ88 783 aaPredicted RBP9.76□□□□□ -0.85
SEC22A-207ENST00000481965 CPB1P15086 417 aa9.75□□□□□ -0.85
SEC22A-207ENST00000481965 PCDH1Q08174 1060 aa9.75□□□□□ -0.85
SEC22A-207ENST00000481965 PERM1Q5SV97 790 aa9.75□□□□□ -0.85
SEC22A-207ENST00000481965 KANK3Q6NY19 840 aa9.75□□□□□ -0.85
SEC22A-207ENST00000481965 VWA5B2Q8N398 1253 aa9.75□□□□□ -0.85
SEC22A-207ENST00000481965 TNFRSF25Q93038 417 aa9.75□□□□□ -0.85
SEC22A-207ENST00000481965 PPT2Q9UMR5 302 aa9.75□□□□□ -0.85
SEC22A-207ENST00000481965 CDC14CA4D256 554 aa9.74□□□□□ -0.85
SEC22A-207ENST00000481965 TLR3O15455 904 aaKnown RBP9.74□□□□□ -0.85
SEC22A-207ENST00000481965 SEZ6Q53EL9 994 aa9.74□□□□□ -0.85
SEC22A-207ENST00000481965 SDE2Q6IQ49 451 aa9.74□□□□□ -0.85
SEC22A-207ENST00000481965 CCDC81Q6ZN84 652 aa9.74□□□□□ -0.85
SEC22A-207ENST00000481965 FAM35AQ86V20 835 aa9.74□□□□□ -0.85
SEC22A-207ENST00000481965 GATAD2BQ8WXI9 593 aa9.74□□□□□ -0.85
SEC22A-207ENST00000481965 TRERF1Q96PN7 1200 aa9.74□□□□□ -0.85
SEC22A-207ENST00000481965 ADAM19Q9H013 955 aa9.74□□□□□ -0.85
SEC22A-207ENST00000481965 SLC6A14Q9UN76 642 aa9.74□□□□□ -0.85
SEC22A-207ENST00000481965 TRIM33Q9UPN9 1127 aa9.74□□□□□ -0.85
SEC22A-207ENST00000481965 K7ELQ4 463 aaPredicted RBP9.73□□□□□ -0.85
SEC22A-207ENST00000481965 SMNDC1O75940 238 aaKnown RBP eCLIP9.73□□□□□ -0.85
SEC22A-207ENST00000481965 SEPT6Q14141 434 aa9.73□□□□□ -0.85
SEC22A-207ENST00000481965 CCDC84Q86UT8 332 aaPredicted RBP9.73□□□□□ -0.85
SEC22A-207ENST00000481965 GRIN3AQ8TCU5 1115 aa9.73□□□□□ -0.85
SEC22A-207ENST00000481965 HNRNPLLQ8WVV9 542 aaKnown RBP9.73□□□□□ -0.85
SEC22A-207ENST00000481965 GAL3ST3Q96A11 431 aa9.73□□□□□ -0.85
SEC22A-207ENST00000481965 LPIN3Q9BQK8 851 aa9.73□□□□□ -0.85
SEC22A-207ENST00000481965 SRRTQ9BXP5 876 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms