RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 SSH1Q8WYL5 1049 aa15.27■□□□□ 0.04
SQSTM1-207ENST00000481335 ZNF594Q96JF6 807 aaPredicted RBP15.27■□□□□ 0.04
SQSTM1-207ENST00000481335 PPP2R3BQ9Y5P8 575 aa15.27■□□□□ 0.04
SQSTM1-207ENST00000481335 FAM205AQ6ZU69 1335 aa15.26■□□□□ 0.03
SQSTM1-207ENST00000481335 SASH1O94885 1247 aa15.26■□□□□ 0.03
SQSTM1-207ENST00000481335 DLGAP5Q15398 846 aa15.26■□□□□ 0.03
SQSTM1-207ENST00000481335 BICC1Q9H694 974 aaKnown RBP15.26■□□□□ 0.03
SQSTM1-207ENST00000481335 KIF16BQ96L93 1317 aa15.25■□□□□ 0.03
SQSTM1-207ENST00000481335 SNAP23O00161 211 aa15.25■□□□□ 0.03
SQSTM1-207ENST00000481335 MYO1BO43795 1136 aa15.25■□□□□ 0.03
SQSTM1-207ENST00000481335 RASAL3Q86YV0 1011 aa15.25■□□□□ 0.03
SQSTM1-207ENST00000481335 RIPOR2Q9Y4F9 1068 aa15.25■□□□□ 0.03
SQSTM1-207ENST00000481335 MYH13Q9UKX3 1938 aa15.25■□□□□ 0.03
SQSTM1-207ENST00000481335 HIBADHP31937 336 aaKnown RBP15.24■□□□□ 0.03
SQSTM1-207ENST00000481335 KIF23Q02241 960 aaPredicted RBP15.24■□□□□ 0.03
SQSTM1-207ENST00000481335 ARMC9Q7Z3E5 817 aa15.24■□□□□ 0.03
SQSTM1-207ENST00000481335 CERS5Q8N5B7 392 aa15.24■□□□□ 0.03
SQSTM1-207ENST00000481335 TDRD7Q8NHU6 1098 aaKnown RBP15.24■□□□□ 0.03
SQSTM1-207ENST00000481335 ZIC5Q96T25 663 aa15.24■□□□□ 0.03
SQSTM1-207ENST00000481335 SMC4Q9NTJ3 1288 aa15.24■□□□□ 0.03
SQSTM1-207ENST00000481335 SPDYE2BA6NHP3 402 aa15.23■□□□□ 0.03
SQSTM1-207ENST00000481335 UNCXA6NJT0 531 aa15.23■□□□□ 0.03
SQSTM1-207ENST00000481335 PLIN1O60240 522 aa15.23■□□□□ 0.03
SQSTM1-207ENST00000481335 SPDYE6P0CI01 402 aa15.23■□□□□ 0.03
SQSTM1-207ENST00000481335 ANKRD44Q8N8A2 993 aa15.23■□□□□ 0.03
SQSTM1-207ENST00000481335 ABHD8Q96I13 439 aa15.23■□□□□ 0.03
SQSTM1-207ENST00000481335 USP44Q9H0E7 712 aa15.23■□□□□ 0.03
SQSTM1-207ENST00000481335 HDAC5Q9UQL6 1122 aa15.23■□□□□ 0.03
SQSTM1-207ENST00000481335 PDE8BO95263 885 aa15.22■□□□□ 0.03
SQSTM1-207ENST00000481335 TBC1D22AQ8WUA7 517 aa15.22■□□□□ 0.03
SQSTM1-207ENST00000481335 FAM84BQ96KN1 310 aaPredicted RBP15.22■□□□□ 0.03
SQSTM1-207ENST00000481335 SERPINA10Q9UK55 444 aa15.22■□□□□ 0.03
SQSTM1-207ENST00000481335 FBXO3Q9UK99 471 aa15.22■□□□□ 0.03
SQSTM1-207ENST00000481335 TNFAIP1Q13829 316 aa15.21■□□□□ 0.03
SQSTM1-207ENST00000481335 TTLL12Q14166 644 aaPredicted RBP15.21■□□□□ 0.03
SQSTM1-207ENST00000481335 MAP3K11Q16584 847 aa15.21■□□□□ 0.03
SQSTM1-207ENST00000481335 CFAP100Q494V2 611 aa15.21■□□□□ 0.03
SQSTM1-207ENST00000481335 CAVIN4Q5BKX8 364 aa15.21■□□□□ 0.03
SQSTM1-207ENST00000481335 METTL24Q5JXM2 366 aa15.21■□□□□ 0.03
SQSTM1-207ENST00000481335 MFSD14BQ5SR56 506 aa15.21■□□□□ 0.03
SQSTM1-207ENST00000481335 VPS37DQ86XT2 251 aa15.21■□□□□ 0.03
SQSTM1-207ENST00000481335 VGLL2Q8N8G2 317 aa15.21■□□□□ 0.03
SQSTM1-207ENST00000481335 CDCA7LQ96GN5 454 aa15.21■□□□□ 0.03
SQSTM1-207ENST00000481335 CSRNP1Q96S65 589 aa15.21■□□□□ 0.03
SQSTM1-207ENST00000481335 PUS3Q9BZE2 481 aaKnown RBP15.21■□□□□ 0.03
SQSTM1-207ENST00000481335 API5Q9BZZ5 524 aaKnown RBP15.21■□□□□ 0.03
SQSTM1-207ENST00000481335 DEFB129Q9H1M3 183 aa15.21■□□□□ 0.03
SQSTM1-207ENST00000481335 TSKSQ9UJT2 592 aa15.21■□□□□ 0.03
SQSTM1-207ENST00000481335 GYG1P46976 350 aa15.2■□□□□ 0.02
SQSTM1-207ENST00000481335 FBXO33Q7Z6M2 555 aa15.2■□□□□ 0.02
SQSTM1-207ENST00000481335 RNF186Q9NXI6 227 aa15.2■□□□□ 0.02
SQSTM1-207ENST00000481335 PPP1R12BO60237 982 aaPredicted RBP15.19■□□□□ 0.02
SQSTM1-207ENST00000481335 HDLBPQ00341 1268 aaKnown RBP15.19■□□□□ 0.02
SQSTM1-207ENST00000481335 SREBF2Q12772 1141 aa15.19■□□□□ 0.02
SQSTM1-207ENST00000481335 PUM3Q15397 648 aaKnown RBP15.19■□□□□ 0.02
SQSTM1-207ENST00000481335 SUPT20HL1Q3ZLR7 823 aa15.19■□□□□ 0.02
SQSTM1-207ENST00000481335 LDLRAD1Q5T700 205 aa15.19■□□□□ 0.02
SQSTM1-207ENST00000481335 SUGT1Q9Y2Z0 365 aa15.19■□□□□ 0.02
SQSTM1-207ENST00000481335 F8W031 263 aaPredicted RBP15.18■□□□□ 0.02
SQSTM1-207ENST00000481335 UBE2Q2LH0YL09 131 aa15.18■□□□□ 0.02
SQSTM1-207ENST00000481335 IFIT1P09914 478 aaKnown RBP15.18■□□□□ 0.02
SQSTM1-207ENST00000481335 UBTFL1P0CB47 393 aaPredicted RBP15.18■□□□□ 0.02
SQSTM1-207ENST00000481335 TM4SF4P48230 202 aa15.18■□□□□ 0.02
SQSTM1-207ENST00000481335 LRRC24Q50LG9 513 aa15.18■□□□□ 0.02
SQSTM1-207ENST00000481335 NOM1Q5C9Z4 860 aaKnown RBP15.18■□□□□ 0.02
SQSTM1-207ENST00000481335 PRAMEF18Q5VWM3 479 aa15.18■□□□□ 0.02
SQSTM1-207ENST00000481335 ARHGAP45Q92619 1136 aa15.18■□□□□ 0.02
SQSTM1-207ENST00000481335 PRMT6Q96LA8 375 aaPredicted RBP15.18■□□□□ 0.02
SQSTM1-207ENST00000481335 TTF2Q9UNY4 1162 aaKnown RBP15.18■□□□□ 0.02
SQSTM1-207ENST00000481335 SCAF8Q9UPN6 1271 aaKnown RBP15.18■□□□□ 0.02
SQSTM1-207ENST00000481335 SSC5DA1L4H1 1573 aa15.18■□□□□ 0.02
SQSTM1-207ENST00000481335 MAST3O60307 1309 aa15.17■□□□□ 0.02
SQSTM1-207ENST00000481335 EYA2O00167 538 aa15.17■□□□□ 0.02
SQSTM1-207ENST00000481335 TRPA1O75762 1119 aa15.17■□□□□ 0.02
SQSTM1-207ENST00000481335 ZBTB48P10074 688 aaPredicted RBP15.17■□□□□ 0.02
SQSTM1-207ENST00000481335 FGFR2P21802 821 aa15.17■□□□□ 0.02
SQSTM1-207ENST00000481335 RFX5P48382 616 aaPredicted RBP15.17■□□□□ 0.02
SQSTM1-207ENST00000481335 RBM5P52756 815 aaKnown RBP eCLIP15.17■□□□□ 0.02
SQSTM1-207ENST00000481335 SPDYE2Q495Y8 402 aa15.17■□□□□ 0.02
SQSTM1-207ENST00000481335 MOB2Q70IA6 237 aa15.17■□□□□ 0.02
SQSTM1-207ENST00000481335 MRIQ9BWK5 157 aa15.17■□□□□ 0.02
SQSTM1-207ENST00000481335 CFHR5Q9BXR6 569 aa15.17■□□□□ 0.02
SQSTM1-207ENST00000481335 OTOFQ9HC10 1997 aa15.16■□□□□ 0.02
SQSTM1-207ENST00000481335 ZBTB22O15209 634 aa15.16■□□□□ 0.02
SQSTM1-207ENST00000481335 FRAT2O75474 233 aaPredicted RBP15.16■□□□□ 0.02
SQSTM1-207ENST00000481335 CIAO1O76071 339 aa15.16■□□□□ 0.02
SQSTM1-207ENST00000481335 INHBEP58166 350 aa15.16■□□□□ 0.02
SQSTM1-207ENST00000481335 PTPN12Q05209 780 aaKnown RBP15.16■□□□□ 0.02
SQSTM1-207ENST00000481335 LPIN2Q92539 896 aa15.16■□□□□ 0.02
SQSTM1-207ENST00000481335 MCOLN1Q9GZU1 580 aa15.16■□□□□ 0.02
SQSTM1-207ENST00000481335 VEZTQ9HBM0 779 aa15.16■□□□□ 0.02
SQSTM1-207ENST00000481335 NOB1Q9ULX3 412 aaKnown RBP15.16■□□□□ 0.02
SQSTM1-207ENST00000481335 ANGEL1Q9UNK9 670 aaKnown RBP15.16■□□□□ 0.02
SQSTM1-207ENST00000481335 JAG2Q9Y219 1238 aa15.16■□□□□ 0.02
SQSTM1-207ENST00000481335 ALDH1A1P00352 501 aa15.15■□□□□ 0.02
SQSTM1-207ENST00000481335 SLC5A1P13866 664 aa15.15■□□□□ 0.02
SQSTM1-207ENST00000481335 IREB2P48200 963 aaKnown RBP15.15■□□□□ 0.02
SQSTM1-207ENST00000481335 TNNI2P48788 182 aa15.15■□□□□ 0.02
SQSTM1-207ENST00000481335 RARSP54136 660 aaKnown RBP15.15■□□□□ 0.02
SQSTM1-207ENST00000481335 DGKZQ13574 1117 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms