RNA–Protein interactions for RNA: ENST00000480989.1

GTF3C2-210, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 4

Gene GTF3C2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-210ENST00000480989 COL1A1P02452 1464 aaPredicted RBP11.91□□□□□ -0.5
GTF3C2-210ENST00000480989 TTLL12Q14166 644 aaPredicted RBP11.91□□□□□ -0.5
GTF3C2-210ENST00000480989 BEND3Q5T5X7 828 aa11.91□□□□□ -0.5
GTF3C2-210ENST00000480989 SPRYD7Q5W111 196 aa11.91□□□□□ -0.5
GTF3C2-210ENST00000480989 C15orf52Q6ZUT6 534 aaKnown RBP11.91□□□□□ -0.5
GTF3C2-210ENST00000480989 CDAN1Q8IWY9 1227 aa11.91□□□□□ -0.5
GTF3C2-210ENST00000480989 OGFOD1Q8N543 542 aa11.91□□□□□ -0.5
GTF3C2-210ENST00000480989 LINS1Q8NG48 757 aa11.91□□□□□ -0.5
GTF3C2-210ENST00000480989 ANGEL1Q9UNK9 670 aaKnown RBP11.91□□□□□ -0.5
GTF3C2-210ENST00000480989 IGF2BP3O00425 579 aaKnown RBP eCLIP11.9□□□□□ -0.5
GTF3C2-210ENST00000480989 IL1R1P14778 569 aa11.9□□□□□ -0.5
GTF3C2-210ENST00000480989 FKBP5Q13451 457 aaPredicted RBP11.9□□□□□ -0.5
GTF3C2-210ENST00000480989 MAP3K11Q16584 847 aa11.9□□□□□ -0.5
GTF3C2-210ENST00000480989 NOM1Q5C9Z4 860 aaKnown RBP11.9□□□□□ -0.5
GTF3C2-210ENST00000480989 MTMR14Q8NCE2 650 aa11.9□□□□□ -0.5
GTF3C2-210ENST00000480989 ZNF594Q96JF6 807 aaPredicted RBP11.9□□□□□ -0.5
GTF3C2-210ENST00000480989 PRMT6Q96LA8 375 aaPredicted RBP11.9□□□□□ -0.5
GTF3C2-210ENST00000480989 MPHOSPH8Q99549 860 aa11.9□□□□□ -0.5
GTF3C2-210ENST00000480989 ANKRD2Q9GZV1 360 aa11.9□□□□□ -0.5
GTF3C2-210ENST00000480989 DEFB129Q9H1M3 183 aa11.9□□□□□ -0.5
GTF3C2-210ENST00000480989 RBBP6Q7Z6E9 1792 aaKnown RBP11.9□□□□□ -0.51
GTF3C2-210ENST00000480989 ZSWIM8A7E2V4 1837 aa11.89□□□□□ -0.51
GTF3C2-210ENST00000480989 CLRN2A0PK11 232 aa11.89□□□□□ -0.51
GTF3C2-210ENST00000480989 F8W031 263 aaPredicted RBP11.89□□□□□ -0.51
GTF3C2-210ENST00000480989 EXOSC9Q06265 439 aaKnown RBP11.89□□□□□ -0.51
GTF3C2-210ENST00000480989 APOBEC3FQ8IUX4 373 aaKnown RBP11.89□□□□□ -0.51
GTF3C2-210ENST00000480989 KAZALD1Q96I82 304 aa11.89□□□□□ -0.51
GTF3C2-210ENST00000480989 ANKRD18BA2A2Z9 1011 aa11.88□□□□□ -0.51
GTF3C2-210ENST00000480989 SPDYE2BA6NHP3 402 aa11.88□□□□□ -0.51
GTF3C2-210ENST00000480989 SPDYE6P0CI01 402 aa11.88□□□□□ -0.51
GTF3C2-210ENST00000480989 GRIK5Q16478 980 aa11.88□□□□□ -0.51
GTF3C2-210ENST00000480989 CFAP100Q494V2 611 aa11.88□□□□□ -0.51
GTF3C2-210ENST00000480989 NBPF12Q5TAG4 269 aaPredicted RBP11.88□□□□□ -0.51
GTF3C2-210ENST00000480989 FBXO46Q6PJ61 603 aaPredicted RBP11.88□□□□□ -0.51
GTF3C2-210ENST00000480989 WNK4Q96J92 1243 aa11.88□□□□□ -0.51
GTF3C2-210ENST00000480989 MYH16Q9H6N6 1097 aa11.88□□□□□ -0.51
GTF3C2-210ENST00000480989 NF2P35240 595 aa11.87□□□□□ -0.51
GTF3C2-210ENST00000480989 MMP14P50281 582 aa11.87□□□□□ -0.51
GTF3C2-210ENST00000480989 DLGAP5Q15398 846 aa11.87□□□□□ -0.51
GTF3C2-210ENST00000480989 PKN2Q16513 984 aaKnown RBP11.87□□□□□ -0.51
GTF3C2-210ENST00000480989 LMBR1LQ6UX01 489 aa11.87□□□□□ -0.51
GTF3C2-210ENST00000480989 ARMC9Q7Z3E5 817 aa11.87□□□□□ -0.51
GTF3C2-210ENST00000480989 IFNL1Q8IU54 200 aa11.87□□□□□ -0.51
GTF3C2-210ENST00000480989 PTPN18Q99952 460 aa11.87□□□□□ -0.51
GTF3C2-210ENST00000480989 CHMP4AQ9BY43 222 aa11.87□□□□□ -0.51
GTF3C2-210ENST00000480989 PUS3Q9BZE2 481 aaKnown RBP11.87□□□□□ -0.51
GTF3C2-210ENST00000480989 HDAC9Q9UKV0 1011 aa11.87□□□□□ -0.51
GTF3C2-210ENST00000480989 SALL2Q9Y467 1007 aaPredicted RBP11.87□□□□□ -0.51
GTF3C2-210ENST00000480989 FKTNO75072 461 aa11.86□□□□□ -0.51
GTF3C2-210ENST00000480989 USP2O75604 605 aaPredicted RBP11.86□□□□□ -0.51
GTF3C2-210ENST00000480989 KCNJ4P48050 445 aa11.86□□□□□ -0.51
GTF3C2-210ENST00000480989 FKBP1AP62942 108 aaKnown RBP11.86□□□□□ -0.51
GTF3C2-210ENST00000480989 SREBF2Q12772 1141 aa11.86□□□□□ -0.51
GTF3C2-210ENST00000480989 IFIT5Q13325 482 aaKnown RBP11.86□□□□□ -0.51
GTF3C2-210ENST00000480989 PRPF38BQ5VTL8 546 aaKnown RBP11.86□□□□□ -0.51
GTF3C2-210ENST00000480989 TEPSINQ96N21 525 aa11.86□□□□□ -0.51
GTF3C2-210ENST00000480989 RNF216Q9NWF9 866 aaPredicted RBP11.86□□□□□ -0.51
GTF3C2-210ENST00000480989 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.86□□□□□ -0.51
GTF3C2-210ENST00000480989 FAM205AQ6ZU69 1335 aa11.86□□□□□ -0.51
GTF3C2-210ENST00000480989 KIAA0100Q14667 2235 aaKnown RBP11.85□□□□□ -0.51
GTF3C2-210ENST00000480989 POTEFA5A3E0 1075 aa11.85□□□□□ -0.51
GTF3C2-210ENST00000480989 HOXD11P31277 338 aaPredicted RBP11.85□□□□□ -0.51
GTF3C2-210ENST00000480989 GYG1P46976 350 aa11.85□□□□□ -0.51
GTF3C2-210ENST00000480989 OTOP1Q7RTM1 612 aa11.85□□□□□ -0.51
GTF3C2-210ENST00000480989 TDRD7Q8NHU6 1098 aaKnown RBP11.85□□□□□ -0.51
GTF3C2-210ENST00000480989 SUCLG2Q96I99 432 aa11.85□□□□□ -0.51
GTF3C2-210ENST00000480989 CHMP3Q9Y3E7 222 aa11.85□□□□□ -0.51
GTF3C2-210ENST00000480989 GRM8O00222 908 aa11.84□□□□□ -0.51
GTF3C2-210ENST00000480989 PLIN1O60240 522 aa11.84□□□□□ -0.51
GTF3C2-210ENST00000480989 ZBTB48P10074 688 aaPredicted RBP11.84□□□□□ -0.51
GTF3C2-210ENST00000480989 RASA3Q14644 834 aa11.84□□□□□ -0.51
GTF3C2-210ENST00000480989 WDR63Q8IWG1 891 aa11.84□□□□□ -0.51
GTF3C2-210ENST00000480989 FAM84BQ96KN1 310 aaPredicted RBP11.84□□□□□ -0.51
GTF3C2-210ENST00000480989 VEZTQ9HBM0 779 aa11.84□□□□□ -0.51
GTF3C2-210ENST00000480989 PPP2R3BQ9Y5P8 575 aa11.84□□□□□ -0.51
GTF3C2-210ENST00000480989 TESPA1A2RU30 521 aaPredicted RBP11.83□□□□□ -0.52
GTF3C2-210ENST00000480989 MANSC4A6NHS7 340 aaPredicted RBP11.83□□□□□ -0.52
GTF3C2-210ENST00000480989 CRHR2Q13324 411 aa11.83□□□□□ -0.52
GTF3C2-210ENST00000480989 SPDYE2Q495Y8 402 aa11.83□□□□□ -0.52
GTF3C2-210ENST00000480989 LDHAL6AQ6ZMR3 332 aa11.83□□□□□ -0.52
GTF3C2-210ENST00000480989 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.83□□□□□ -0.52
GTF3C2-210ENST00000480989 ZNF804AQ7Z570 1209 aa11.83□□□□□ -0.52
GTF3C2-210ENST00000480989 SLC10A4Q96EP9 437 aa11.83□□□□□ -0.52
GTF3C2-210ENST00000480989 MS4A4AQ96JQ5 239 aa11.83□□□□□ -0.52
GTF3C2-210ENST00000480989 TDRD3Q9H7E2 651 aaKnown RBP11.83□□□□□ -0.52
GTF3C2-210ENST00000480989 MRS2Q9HD23 443 aa11.83□□□□□ -0.52
GTF3C2-210ENST00000480989 ZNF70Q9UC06 446 aaPredicted RBP11.83□□□□□ -0.52
GTF3C2-210ENST00000480989 RIPOR2Q9Y4F9 1068 aa11.83□□□□□ -0.52
GTF3C2-210ENST00000480989 TRIM17Q9Y577 477 aa11.83□□□□□ -0.52
GTF3C2-210ENST00000480989 NBPF7P0C2Y1 421 aaPredicted RBP11.82□□□□□ -0.52
GTF3C2-210ENST00000480989 MFSD14BQ5SR56 506 aa11.82□□□□□ -0.52
GTF3C2-210ENST00000480989 ANKRD44Q8N8A2 993 aa11.82□□□□□ -0.52
GTF3C2-210ENST00000480989 VGLL2Q8N8G2 317 aa11.82□□□□□ -0.52
GTF3C2-210ENST00000480989 CD99L2Q8TCZ2 262 aa11.82□□□□□ -0.52
GTF3C2-210ENST00000480989 ZNF521Q96K83 1311 aa11.82□□□□□ -0.52
GTF3C2-210ENST00000480989 ALDH1A1P00352 501 aa11.81□□□□□ -0.52
GTF3C2-210ENST00000480989 UBE4AQ14139 1066 aa11.81□□□□□ -0.52
GTF3C2-210ENST00000480989 LRRC24Q50LG9 513 aa11.81□□□□□ -0.52
GTF3C2-210ENST00000480989 BRI3BPQ8WY22 251 aa11.81□□□□□ -0.52
GTF3C2-210ENST00000480989 TMEM39BQ9GZU3 492 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms