RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	DLGAP5	Q15398	846 aa		19.97	■□□□□ 0.79
HDLBP-238	ENST00000479894	CWC25	Q9NXE8	425 aa	Predicted RBP	19.97	■□□□□ 0.79
HDLBP-238	ENST00000479894	RBM27	Q9P2N5	1060 aa	Known RBP	19.97	■□□□□ 0.79
HDLBP-238	ENST00000479894		A0A0C4DFX4	3053 aa		19.97	■□□□□ 0.79
HDLBP-238	ENST00000479894	COL6A3	P12111	3177 aa		19.97	■□□□□ 0.79
HDLBP-238	ENST00000479894	NCBP3	Q53F19	620 aa	Known RBP	19.96	■□□□□ 0.79
HDLBP-238	ENST00000479894	TXNRD3	Q86VQ6	643 aa		19.95	■□□□□ 0.78
HDLBP-238	ENST00000479894	MYD88	Q99836	296 aa		19.95	■□□□□ 0.78
HDLBP-238	ENST00000479894	ZFYVE28	Q9HCC9	887 aa		19.95	■□□□□ 0.78
HDLBP-238	ENST00000479894	MYO1B	O43795	1136 aa		19.94	■□□□□ 0.78
HDLBP-238	ENST00000479894	USP2	O75604	605 aa	Predicted RBP	19.94	■□□□□ 0.78
HDLBP-238	ENST00000479894	CTSW	P56202	376 aa		19.94	■□□□□ 0.78
HDLBP-238	ENST00000479894	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	19.94	■□□□□ 0.78
HDLBP-238	ENST00000479894	GTF2I	P78347	998 aa		19.93	■□□□□ 0.78
HDLBP-238	ENST00000479894	TAF1C	Q15572	869 aa	Predicted RBP	19.93	■□□□□ 0.78
HDLBP-238	ENST00000479894	MS4A4A	Q96JQ5	239 aa		19.93	■□□□□ 0.78
HDLBP-238	ENST00000479894	PRO3102	Q9H379	93 aa		19.93	■□□□□ 0.78
HDLBP-238	ENST00000479894	GNRH1	P01148	92 aa		19.92	■□□□□ 0.78
HDLBP-238	ENST00000479894	PRMT2	P55345	433 aa		19.92	■□□□□ 0.78
HDLBP-238	ENST00000479894	NBPF12	Q5TAG4	269 aa	Predicted RBP	19.92	■□□□□ 0.78
HDLBP-238	ENST00000479894	DUSP27	Q5VZP5	1158 aa		19.92	■□□□□ 0.78
HDLBP-238	ENST00000479894	CCDC146	Q8IYE0	955 aa		19.92	■□□□□ 0.78
HDLBP-238	ENST00000479894	TTLL11	Q8NHH1	800 aa		19.92	■□□□□ 0.78
HDLBP-238	ENST00000479894	LAS1L	Q9Y4W2	734 aa	Known RBP	19.92	■□□□□ 0.78
HDLBP-238	ENST00000479894	ZSWIM8	A7E2V4	1837 aa		19.91	■□□□□ 0.78
HDLBP-238	ENST00000479894	CALD1	Q05682	793 aa	Known RBP	19.91	■□□□□ 0.78
HDLBP-238	ENST00000479894	DPF3	Q92784	378 aa		19.91	■□□□□ 0.78
HDLBP-238	ENST00000479894	OPTN	Q96CV9	577 aa		19.91	■□□□□ 0.78
HDLBP-238	ENST00000479894	METTL22	Q9BUU2	404 aa	Predicted RBP	19.91	■□□□□ 0.78
HDLBP-238	ENST00000479894	ANKRD2	Q9GZV1	360 aa		19.91	■□□□□ 0.78
HDLBP-238	ENST00000479894		A0A1W2PPC1	479 aa		19.9	■□□□□ 0.78
HDLBP-238	ENST00000479894	JARID2	Q92833	1246 aa	Predicted RBP	19.9	■□□□□ 0.78
HDLBP-238	ENST00000479894	GREM2	Q9H772	168 aa		19.9	■□□□□ 0.78
HDLBP-238	ENST00000479894	PHAX	Q9H814	394 aa	Known RBP	19.9	■□□□□ 0.78
HDLBP-238	ENST00000479894	SPDYE2B	A6NHP3	402 aa		19.89	■□□□□ 0.77
HDLBP-238	ENST00000479894	WDHD1	O75717	1129 aa	Predicted RBP	19.89	■□□□□ 0.77
HDLBP-238	ENST00000479894	SPDYE6	P0CI01	402 aa		19.89	■□□□□ 0.77
HDLBP-238	ENST00000479894	IGHMBP2	P38935	993 aa	Known RBP	19.89	■□□□□ 0.77
HDLBP-238	ENST00000479894	MNX1	P50219	401 aa	Predicted RBP	19.89	■□□□□ 0.77
HDLBP-238	ENST00000479894	GTF2A2	P52657	109 aa		19.89	■□□□□ 0.77
HDLBP-238	ENST00000479894	FKBP1A	P62942	108 aa	Known RBP	19.89	■□□□□ 0.77
HDLBP-238	ENST00000479894	KIF22	Q14807	665 aa		19.89	■□□□□ 0.77
HDLBP-238	ENST00000479894	NKX2-3	Q8TAU0	364 aa		19.89	■□□□□ 0.77
HDLBP-238	ENST00000479894	SH3TC2	Q8TF17	1288 aa		19.89	■□□□□ 0.77
HDLBP-238	ENST00000479894	BRI3BP	Q8WY22	251 aa		19.89	■□□□□ 0.77
HDLBP-238	ENST00000479894	HTATIP2	Q9BUP3	242 aa		19.89	■□□□□ 0.77
HDLBP-238	ENST00000479894	CD209	Q9NNX6	404 aa		19.89	■□□□□ 0.77
HDLBP-238	ENST00000479894	APAF1	O14727	1248 aa		19.88	■□□□□ 0.77
HDLBP-238	ENST00000479894	CFAP100	Q494V2	611 aa		19.88	■□□□□ 0.77
HDLBP-238	ENST00000479894	SHISA4	Q96DD7	197 aa		19.88	■□□□□ 0.77
HDLBP-238	ENST00000479894	ELP3	Q9H9T3	547 aa		19.88	■□□□□ 0.77
HDLBP-238	ENST00000479894	ZCCHC17	Q9NP64	241 aa	Known RBP	19.88	■□□□□ 0.77
HDLBP-238	ENST00000479894	TRIM35	Q9UPQ4	493 aa		19.88	■□□□□ 0.77
HDLBP-238	ENST00000479894	CCL15-CCL14	A0A0B4J2E2	113 aa		19.87	■□□□□ 0.77
HDLBP-238	ENST00000479894	CLRN2	A0PK11	232 aa		19.87	■□□□□ 0.77
HDLBP-238	ENST00000479894	TLR2	O60603	784 aa		19.87	■□□□□ 0.77
HDLBP-238	ENST00000479894	DDX58	O95786	925 aa	Known RBP	19.87	■□□□□ 0.77
HDLBP-238	ENST00000479894	MYC	P01106	439 aa	Predicted RBP	19.87	■□□□□ 0.77
HDLBP-238	ENST00000479894	KLRK1	P26718	216 aa		19.87	■□□□□ 0.77
HDLBP-238	ENST00000479894	TNFAIP1	Q13829	316 aa		19.87	■□□□□ 0.77
HDLBP-238	ENST00000479894	RASA3	Q14644	834 aa		19.87	■□□□□ 0.77
HDLBP-238	ENST00000479894	CCL15	Q16663	113 aa		19.87	■□□□□ 0.77
HDLBP-238	ENST00000479894	CERS5	Q8N5B7	392 aa		19.87	■□□□□ 0.77
HDLBP-238	ENST00000479894	PRMT6	Q96LA8	375 aa	Predicted RBP	19.87	■□□□□ 0.77
HDLBP-238	ENST00000479894	VEZT	Q9HBM0	779 aa		19.87	■□□□□ 0.77
HDLBP-238	ENST00000479894		A0A1B0GUL6	1792 aa		19.87	■□□□□ 0.77
HDLBP-238	ENST00000479894	ARAP2	Q8WZ64	1704 aa		19.87	■□□□□ 0.77
HDLBP-238	ENST00000479894	LACTB	P83111	547 aa	Predicted RBP	19.86	■□□□□ 0.77
HDLBP-238	ENST00000479894	NEUROD2	Q15784	382 aa		19.86	■□□□□ 0.77
HDLBP-238	ENST00000479894	CCDC27	Q2M243	656 aa		19.86	■□□□□ 0.77
HDLBP-238	ENST00000479894	UBE2Q1	Q7Z7E8	422 aa		19.86	■□□□□ 0.77
HDLBP-238	ENST00000479894	NR2E3	Q9Y5X4	410 aa		19.86	■□□□□ 0.77
HDLBP-238	ENST00000479894	C15orf52	Q6ZUT6	534 aa	Known RBP	19.85	■□□□□ 0.77
HDLBP-238	ENST00000479894	FAM43A	Q8N2R8	423 aa		19.85	■□□□□ 0.77
HDLBP-238	ENST00000479894	PCDHAC2	Q9Y5I4	1007 aa		19.85	■□□□□ 0.77
HDLBP-238	ENST00000479894	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	19.84	■□□□□ 0.77
HDLBP-238	ENST00000479894	IRS2	Q9Y4H2	1338 aa		19.83	■□□□□ 0.77
HDLBP-238	ENST00000479894	KCNJ4	P48050	445 aa		19.83	■□□□□ 0.77
HDLBP-238	ENST00000479894	GJA8	P48165	433 aa		19.83	■□□□□ 0.77
HDLBP-238	ENST00000479894	MPHOSPH8	Q99549	860 aa		19.83	■□□□□ 0.77
HDLBP-238	ENST00000479894	CHMP4A	Q9BY43	222 aa		19.83	■□□□□ 0.77
HDLBP-238	ENST00000479894	MBIP	Q9NS73	344 aa		19.83	■□□□□ 0.77
HDLBP-238	ENST00000479894	LAMA3	Q16787	3333 aa		19.83	■□□□□ 0.76
HDLBP-238	ENST00000479894	IGKV5-2	P06315	115 aa		19.82	■□□□□ 0.76
HDLBP-238	ENST00000479894	GJB1	P08034	283 aa		19.82	■□□□□ 0.76
HDLBP-238	ENST00000479894	IL1R1	P14778	569 aa		19.82	■□□□□ 0.76
HDLBP-238	ENST00000479894	MAP3K9	P80192	1104 aa		19.82	■□□□□ 0.76
HDLBP-238	ENST00000479894	MTFR1	Q15390	333 aa		19.82	■□□□□ 0.76
HDLBP-238	ENST00000479894	HELB	Q8NG08	1087 aa	Predicted RBP	19.82	■□□□□ 0.76
HDLBP-238	ENST00000479894	ARHGAP39	Q9C0H5	1083 aa		19.82	■□□□□ 0.76
HDLBP-238	ENST00000479894	ZBTB7B	O15156	539 aa	Predicted RBP	19.81	■□□□□ 0.76
HDLBP-238	ENST00000479894	VGLL4	Q14135	290 aa		19.81	■□□□□ 0.76
HDLBP-238	ENST00000479894	SPDYE2	Q495Y8	402 aa		19.81	■□□□□ 0.76
HDLBP-238	ENST00000479894	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	19.81	■□□□□ 0.76
HDLBP-238	ENST00000479894	CNKSR2	Q8WXI2	1034 aa		19.81	■□□□□ 0.76
HDLBP-238	ENST00000479894	PLA2G12B	Q9BX93	195 aa		19.81	■□□□□ 0.76
HDLBP-238	ENST00000479894	MAP3K2	Q9Y2U5	619 aa		19.81	■□□□□ 0.76
HDLBP-238	ENST00000479894	CSAD	Q9Y600	493 aa		19.81	■□□□□ 0.76
HDLBP-238	ENST00000479894	MGAM	O43451	1857 aa		19.81	■□□□□ 0.76
HDLBP-238	ENST00000479894	AOX1	Q06278	1338 aa		19.8	■□□□□ 0.76

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