RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 FBXO3Q9UK99 471 aa18.86■□□□□ 0.61
PRKN-207ENST00000479615 PDE8BO95263 885 aa18.85■□□□□ 0.61
PRKN-207ENST00000479615 UBTFL1P0CB47 393 aaPredicted RBP18.85■□□□□ 0.61
PRKN-207ENST00000479615 RARSP54136 660 aaKnown RBP18.85■□□□□ 0.61
PRKN-207ENST00000479615 DLGAP5Q15398 846 aa18.85■□□□□ 0.61
PRKN-207ENST00000479615 METTL24Q5JXM2 366 aa18.85■□□□□ 0.61
PRKN-207ENST00000479615 DIEXFQ68CQ4 756 aaKnown RBP18.85■□□□□ 0.61
PRKN-207ENST00000479615 VPS37DQ86XT2 251 aa18.85■□□□□ 0.61
PRKN-207ENST00000479615 TDRD7Q8NHU6 1098 aaKnown RBP18.85■□□□□ 0.61
PRKN-207ENST00000479615 PUS3Q9BZE2 481 aaKnown RBP18.85■□□□□ 0.61
PRKN-207ENST00000479615 THSD7BQ9C0I4 1608 aa18.85■□□□□ 0.61
PRKN-207ENST00000479615 HSPA8P11142 646 aaKnown RBP18.84■□□□□ 0.61
PRKN-207ENST00000479615 ZNF157P51786 506 aaPredicted RBP18.84■□□□□ 0.61
PRKN-207ENST00000479615 LBX1P52954 281 aa18.84■□□□□ 0.61
PRKN-207ENST00000479615 ZBED3Q96IU2 234 aaPredicted RBP18.84■□□□□ 0.61
PRKN-207ENST00000479615 FAM84BQ96KN1 310 aaPredicted RBP18.84■□□□□ 0.61
PRKN-207ENST00000479615 AOC2O75106 756 aa18.83■□□□□ 0.6
PRKN-207ENST00000479615 DLK2Q6UY11 383 aa18.83■□□□□ 0.6
PRKN-207ENST00000479615 PPP2R3BQ9Y5P8 575 aa18.83■□□□□ 0.6
PRKN-207ENST00000479615 CERS5Q8N5B7 392 aa18.82■□□□□ 0.6
PRKN-207ENST00000479615 TBC1D22AQ8WUA7 517 aa18.82■□□□□ 0.6
PRKN-207ENST00000479615 EYA2O00167 538 aa18.81■□□□□ 0.6
PRKN-207ENST00000479615 IFIT1P09914 478 aaKnown RBP18.81■□□□□ 0.6
PRKN-207ENST00000479615 GYG1P46976 350 aa18.81■□□□□ 0.6
PRKN-207ENST00000479615 PUM3Q15397 648 aaKnown RBP18.81■□□□□ 0.6
PRKN-207ENST00000479615 LRRC24Q50LG9 513 aa18.81■□□□□ 0.6
PRKN-207ENST00000479615 MFSD14BQ5SR56 506 aa18.81■□□□□ 0.6
PRKN-207ENST00000479615 FBXO33Q7Z6M2 555 aa18.81■□□□□ 0.6
PRKN-207ENST00000479615 VGLL2Q8N8G2 317 aa18.81■□□□□ 0.6
PRKN-207ENST00000479615 SERPINA10Q9UK55 444 aa18.81■□□□□ 0.6
PRKN-207ENST00000479615 COL1A1P02452 1464 aaPredicted RBP18.81■□□□□ 0.6
PRKN-207ENST00000479615 FAM155AB1AL88 458 aaPredicted RBP18.8■□□□□ 0.6
PRKN-207ENST00000479615 FRAT2O75474 233 aaPredicted RBP18.8■□□□□ 0.6
PRKN-207ENST00000479615 CIAO1O76071 339 aa18.8■□□□□ 0.6
PRKN-207ENST00000479615 GNAI3P08754 354 aa18.8■□□□□ 0.6
PRKN-207ENST00000479615 SLC10A3P09131 477 aa18.8■□□□□ 0.6
PRKN-207ENST00000479615 INTS3Q68E01 1043 aaKnown RBP18.8■□□□□ 0.6
PRKN-207ENST00000479615 POLR2AP24928 1970 aaKnown RBP18.79■□□□□ 0.6
PRKN-207ENST00000479615 SPDYE2BA6NHP3 402 aa18.79■□□□□ 0.6
PRKN-207ENST00000479615 UNCXA6NJT0 531 aa18.79■□□□□ 0.6
PRKN-207ENST00000479615 SPDYE6P0CI01 402 aa18.79■□□□□ 0.6
PRKN-207ENST00000479615 RFX5P48382 616 aaPredicted RBP18.79■□□□□ 0.6
PRKN-207ENST00000479615 PTPN12Q05209 780 aaKnown RBP18.79■□□□□ 0.6
PRKN-207ENST00000479615 CFAP100Q494V2 611 aa18.79■□□□□ 0.6
PRKN-207ENST00000479615 ARMC9Q7Z3E5 817 aa18.79■□□□□ 0.6
PRKN-207ENST00000479615 LPIN2Q92539 896 aa18.79■□□□□ 0.6
PRKN-207ENST00000479615 DEFB129Q9H1M3 183 aa18.79■□□□□ 0.6
PRKN-207ENST00000479615 SAGE1Q9NXZ1 904 aa18.79■□□□□ 0.6
PRKN-207ENST00000479615 SUGT1Q9Y2Z0 365 aa18.79■□□□□ 0.6
PRKN-207ENST00000479615 HDLBPQ00341 1268 aaKnown RBP18.78■□□□□ 0.6
PRKN-207ENST00000479615 TNFAIP1Q13829 316 aa18.78■□□□□ 0.6
PRKN-207ENST00000479615 TTLL12Q14166 644 aaPredicted RBP18.78■□□□□ 0.6
PRKN-207ENST00000479615 MIER1Q8N108 512 aa18.78■□□□□ 0.6
PRKN-207ENST00000479615 MRIQ9BWK5 157 aa18.78■□□□□ 0.6
PRKN-207ENST00000479615 F8W031 263 aaPredicted RBP18.77■□□□□ 0.6
PRKN-207ENST00000479615 SLC5A1P13866 664 aa18.77■□□□□ 0.6
PRKN-207ENST00000479615 FGFR2P21802 821 aa18.77■□□□□ 0.6
PRKN-207ENST00000479615 RBM5P52756 815 aaKnown RBP eCLIP18.77■□□□□ 0.6
PRKN-207ENST00000479615 KIF23Q02241 960 aaPredicted RBP18.77■□□□□ 0.6
PRKN-207ENST00000479615 SUPT20HL1Q3ZLR7 823 aa18.77■□□□□ 0.6
PRKN-207ENST00000479615 KLHDC4Q8TBB5 520 aa18.77■□□□□ 0.6
PRKN-207ENST00000479615 TTF2Q9UNY4 1162 aaKnown RBP18.77■□□□□ 0.6
PRKN-207ENST00000479615 PAPPA2Q9BXP8 1791 aa18.77■□□□□ 0.6
PRKN-207ENST00000479615 PPP1R12BO60237 982 aaPredicted RBP18.76■□□□□ 0.59
PRKN-207ENST00000479615 IL15P40933 162 aaPredicted RBP18.76■□□□□ 0.59
PRKN-207ENST00000479615 HNRNPUQ00839 825 aaKnown RBP eCLIP18.76■□□□□ 0.59
PRKN-207ENST00000479615 ATF7IPQ6VMQ6 1270 aa18.76■□□□□ 0.59
PRKN-207ENST00000479615 PRMT6Q96LA8 375 aaPredicted RBP18.76■□□□□ 0.59
PRKN-207ENST00000479615 CEP126Q9P2H0 1117 aa18.76■□□□□ 0.59
PRKN-207ENST00000479615 ZNF646O15015 1829 aaPredicted RBP18.76■□□□□ 0.59
PRKN-207ENST00000479615 A0A1B0GUL6 1792 aa18.76■□□□□ 0.59
PRKN-207ENST00000479615 MAST3O60307 1309 aa18.75■□□□□ 0.59
PRKN-207ENST00000479615 RASAL3Q86YV0 1011 aa18.75■□□□□ 0.59
PRKN-207ENST00000479615 COPRSQ9NQ92 184 aa18.75■□□□□ 0.59
PRKN-207ENST00000479615 GNL3LQ9NVN8 582 aaKnown RBP18.75■□□□□ 0.59
PRKN-207ENST00000479615 LRRFIP2Q9Y608 721 aaKnown RBP18.75■□□□□ 0.59
PRKN-207ENST00000479615 UBE2Q2LH0YL09 131 aa18.74■□□□□ 0.59
PRKN-207ENST00000479615 ZBTB22O15209 634 aa18.74■□□□□ 0.59
PRKN-207ENST00000479615 PRAMEF18Q5VWM3 479 aa18.74■□□□□ 0.59
PRKN-207ENST00000479615 ATG9AQ7Z3C6 839 aa18.74■□□□□ 0.59
PRKN-207ENST00000479615 SCAF8Q9UPN6 1271 aaKnown RBP18.74■□□□□ 0.59
PRKN-207ENST00000479615 JAG2Q9Y219 1238 aa18.74■□□□□ 0.59
PRKN-207ENST00000479615 TNNI2P48788 182 aa18.73■□□□□ 0.59
PRKN-207ENST00000479615 BCAMP50895 628 aa18.73■□□□□ 0.59
PRKN-207ENST00000479615 MTX1Q13505 466 aa18.73■□□□□ 0.59
PRKN-207ENST00000479615 MAP3K11Q16584 847 aa18.73■□□□□ 0.59
PRKN-207ENST00000479615 WDR66Q8TBY9 1149 aa18.73■□□□□ 0.59
PRKN-207ENST00000479615 CSRNP1Q96S65 589 aa18.73■□□□□ 0.59
PRKN-207ENST00000479615 MEIS3Q99687 375 aa18.73■□□□□ 0.59
PRKN-207ENST00000479615 TRIM27P14373 513 aa18.72■□□□□ 0.59
PRKN-207ENST00000479615 CRKP46108 304 aa18.72■□□□□ 0.59
PRKN-207ENST00000479615 CHAF1AQ13111 956 aaPredicted RBP18.72■□□□□ 0.59
PRKN-207ENST00000479615 SPDYE2Q495Y8 402 aa18.72■□□□□ 0.59
PRKN-207ENST00000479615 LDLRAD1Q5T700 205 aa18.72■□□□□ 0.59
PRKN-207ENST00000479615 ZKSCAN2Q63HK3 967 aa18.72■□□□□ 0.59
PRKN-207ENST00000479615 DZIP1LQ8IYY4 767 aaKnown RBP18.72■□□□□ 0.59
PRKN-207ENST00000479615 FRAT1Q92837 279 aaPredicted RBP18.72■□□□□ 0.59
PRKN-207ENST00000479615 TEKT1Q969V4 418 aa18.72■□□□□ 0.59
PRKN-207ENST00000479615 ZIC5Q96T25 663 aa18.72■□□□□ 0.59
PRKN-207ENST00000479615 VEZTQ9HBM0 779 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms