RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 TRIM27P14373 513 aa14.56□□□□□ -0.08
LSM2-212ENST00000477182 PRKG1Q13976 671 aa14.56□□□□□ -0.08
LSM2-212ENST00000477182 APOBEC3FQ8IUX4 373 aaKnown RBP14.56□□□□□ -0.08
LSM2-212ENST00000477182 ARHGAP45Q92619 1136 aa14.56□□□□□ -0.08
LSM2-212ENST00000477182 API5Q9BZZ5 524 aaKnown RBP14.56□□□□□ -0.08
LSM2-212ENST00000477182 RBM27Q9P2N5 1060 aaKnown RBP14.56□□□□□ -0.08
LSM2-212ENST00000477182 PI4KAP2A4QPH2 592 aa14.55□□□□□ -0.08
LSM2-212ENST00000477182 UNCXA6NJT0 531 aa14.55□□□□□ -0.08
LSM2-212ENST00000477182 IGF2BP3O00425 579 aaKnown RBP eCLIP14.55□□□□□ -0.08
LSM2-212ENST00000477182 DDX58O95786 925 aaKnown RBP14.55□□□□□ -0.08
LSM2-212ENST00000477182 CRHR2Q13324 411 aa14.55□□□□□ -0.08
LSM2-212ENST00000477182 PI4KAP1Q8N8J0 262 aa14.55□□□□□ -0.08
LSM2-212ENST00000477182 CLUAP1Q96AJ1 413 aa14.55□□□□□ -0.08
LSM2-212ENST00000477182 FAM89AQ96GI7 184 aa14.55□□□□□ -0.08
LSM2-212ENST00000477182 MYO3BQ8WXR4 1341 aa14.55□□□□□ -0.08
LSM2-212ENST00000477182 COL6A3P12111 3177 aa14.55□□□□□ -0.08
LSM2-212ENST00000477182 HSP90B1P14625 803 aaKnown RBP14.54□□□□□ -0.08
LSM2-212ENST00000477182 C20orf194Q5TEA3 1177 aa14.54□□□□□ -0.08
LSM2-212ENST00000477182 KSR2Q6VAB6 950 aa14.54□□□□□ -0.08
LSM2-212ENST00000477182 ANKRD13DQ6ZTN6 518 aa14.54□□□□□ -0.08
LSM2-212ENST00000477182 RIC3Q7Z5B4 369 aa14.54□□□□□ -0.08
LSM2-212ENST00000477182 PLBD2Q8NHP8 589 aa14.54□□□□□ -0.08
LSM2-212ENST00000477182 WNK4Q96J92 1243 aa14.54□□□□□ -0.08
LSM2-212ENST00000477182 MAP3K2Q9Y2U5 619 aa14.54□□□□□ -0.08
LSM2-212ENST00000477182 RANBP2P49792 3224 aaKnown RBP14.53□□□□□ -0.08
LSM2-212ENST00000477182 COL1A1P02452 1464 aaPredicted RBP14.53□□□□□ -0.08
LSM2-212ENST00000477182 PPP1R12BO60237 982 aaPredicted RBP14.53□□□□□ -0.08
LSM2-212ENST00000477182 RLBP1P12271 317 aa14.53□□□□□ -0.08
LSM2-212ENST00000477182 MAP3K11Q16584 847 aa14.53□□□□□ -0.08
LSM2-212ENST00000477182 SLC4A10Q6U841 1118 aa14.53□□□□□ -0.08
LSM2-212ENST00000477182 FTSJ3Q8IY81 847 aaKnown RBP14.53□□□□□ -0.08
LSM2-212ENST00000477182 DZIP1LQ8IYY4 767 aaKnown RBP14.53□□□□□ -0.08
LSM2-212ENST00000477182 PANK1Q8TE04 598 aa14.53□□□□□ -0.08
LSM2-212ENST00000477182 DNAAF4Q8WXU2 420 aa14.53□□□□□ -0.08
LSM2-212ENST00000477182 DPF3Q92784 378 aa14.53□□□□□ -0.08
LSM2-212ENST00000477182 COL4A1P02462 1669 aa14.52□□□□□ -0.08
LSM2-212ENST00000477182 XDHP47989 1333 aa14.52□□□□□ -0.08
LSM2-212ENST00000477182 IRS4O14654 1257 aaPredicted RBP14.52□□□□□ -0.09
LSM2-212ENST00000477182 IRX6P78412 446 aaPredicted RBP14.52□□□□□ -0.09
LSM2-212ENST00000477182 MS4A1P11836 297 aa14.51□□□□□ -0.09
LSM2-212ENST00000477182 ATP2B4P23634 1241 aa14.51□□□□□ -0.09
LSM2-212ENST00000477182 PDE3AQ14432 1141 aa14.51□□□□□ -0.09
LSM2-212ENST00000477182 TMEM57Q8N5G2 664 aa14.51□□□□□ -0.09
LSM2-212ENST00000477182 ISCA1Q9BUE6 129 aa14.51□□□□□ -0.09
LSM2-212ENST00000477182 PTCH2Q9Y6C5 1203 aa14.51□□□□□ -0.09
LSM2-212ENST00000477182 A0A1W2PPC1 479 aa14.5□□□□□ -0.09
LSM2-212ENST00000477182 SASH1O94885 1247 aa14.5□□□□□ -0.09
LSM2-212ENST00000477182 DACT2Q5SW24 774 aa14.5□□□□□ -0.09
LSM2-212ENST00000477182 MYD88Q99836 296 aa14.5□□□□□ -0.09
LSM2-212ENST00000477182 METTL22Q9BUU2 404 aaPredicted RBP14.5□□□□□ -0.09
LSM2-212ENST00000477182 TESPA1A2RU30 521 aaPredicted RBP14.49□□□□□ -0.09
LSM2-212ENST00000477182 STRIP1Q5VSL9 837 aa14.49□□□□□ -0.09
LSM2-212ENST00000477182 CLMNQ96JQ2 1002 aa14.49□□□□□ -0.09
LSM2-212ENST00000477182 HTATIP2Q9BUP3 242 aa14.49□□□□□ -0.09
LSM2-212ENST00000477182 DEFB129Q9H1M3 183 aa14.49□□□□□ -0.09
LSM2-212ENST00000477182 PRO3102Q9H379 93 aa14.49□□□□□ -0.09
LSM2-212ENST00000477182 SEC31BQ9NQW1 1179 aa14.49□□□□□ -0.09
LSM2-212ENST00000477182 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.49□□□□□ -0.09
LSM2-212ENST00000477182 COG6Q9Y2V7 657 aa14.49□□□□□ -0.09
LSM2-212ENST00000477182 PPP2R3BQ9Y5P8 575 aa14.49□□□□□ -0.09
LSM2-212ENST00000477182 ATP5J2-PTCD1G3V325 749 aa14.48□□□□□ -0.09
LSM2-212ENST00000477182 IREB2P48200 963 aaKnown RBP14.48□□□□□ -0.09
LSM2-212ENST00000477182 CCT4P50991 539 aaKnown RBP14.48□□□□□ -0.09
LSM2-212ENST00000477182 NEXNQ0ZGT2 675 aa14.48□□□□□ -0.09
LSM2-212ENST00000477182 TRIM28Q13263 835 aaKnown RBP14.48□□□□□ -0.09
LSM2-212ENST00000477182 SUPT20HL1Q3ZLR7 823 aa14.48□□□□□ -0.09
LSM2-212ENST00000477182 CCDC152Q4G0S7 254 aa14.48□□□□□ -0.09
LSM2-212ENST00000477182 RTL5Q5HYW3 569 aaPredicted RBP14.48□□□□□ -0.09
LSM2-212ENST00000477182 BEND3Q5T5X7 828 aa14.48□□□□□ -0.09
LSM2-212ENST00000477182 ITPRIPQ8IWB1 547 aa14.48□□□□□ -0.09
LSM2-212ENST00000477182 NKX2-3Q8TAU0 364 aa14.48□□□□□ -0.09
LSM2-212ENST00000477182 FBXW7Q969H0 707 aa14.48□□□□□ -0.09
LSM2-212ENST00000477182 CRBNQ96SW2 442 aa14.48□□□□□ -0.09
LSM2-212ENST00000477182 NR2E3Q9Y5X4 410 aa14.48□□□□□ -0.09
LSM2-212ENST00000477182 MED23Q9ULK4 1368 aa14.47□□□□□ -0.09
LSM2-212ENST00000477182 IGKV5-2P06315 115 aa14.47□□□□□ -0.09
LSM2-212ENST00000477182 CAP1Q01518 475 aa14.47□□□□□ -0.09
LSM2-212ENST00000477182 CWF19L2Q2TBE0 894 aaKnown RBP14.47□□□□□ -0.09
LSM2-212ENST00000477182 ANKRD18AQ8IVF6 992 aa14.47□□□□□ -0.09
LSM2-212ENST00000477182 LINS1Q8NG48 757 aa14.47□□□□□ -0.09
LSM2-212ENST00000477182 PTPN18Q99952 460 aa14.47□□□□□ -0.09
LSM2-212ENST00000477182 SRCIN1Q9C0H9 1055 aa14.47□□□□□ -0.09
LSM2-212ENST00000477182 ZFYVE28Q9HCC9 887 aa14.47□□□□□ -0.09
LSM2-212ENST00000477182 FZD1Q9UP38 647 aa14.47□□□□□ -0.09
LSM2-212ENST00000477182 ZNF646O15015 1829 aaPredicted RBP14.47□□□□□ -0.09
LSM2-212ENST00000477182 WTIPA6NIX2 430 aaPredicted RBP14.46□□□□□ -0.09
LSM2-212ENST00000477182 WDHD1O75717 1129 aaPredicted RBP14.46□□□□□ -0.09
LSM2-212ENST00000477182 MYCP01106 439 aaPredicted RBP14.46□□□□□ -0.09
LSM2-212ENST00000477182 GNRH1P01148 92 aa14.46□□□□□ -0.09
LSM2-212ENST00000477182 NEFLP07196 543 aa14.46□□□□□ -0.09
LSM2-212ENST00000477182 MVPQ14764 893 aaKnown RBP14.46□□□□□ -0.09
LSM2-212ENST00000477182 KIF22Q14807 665 aa14.46□□□□□ -0.09
LSM2-212ENST00000477182 ZBTB38Q8NAP3 1195 aaPredicted RBP14.46□□□□□ -0.09
LSM2-212ENST00000477182 MXD3Q9BW11 206 aa14.46□□□□□ -0.09
LSM2-212ENST00000477182 COA1Q9GZY4 146 aa14.46□□□□□ -0.09
LSM2-212ENST00000477182 NEURL1BA8MQ27 555 aa14.45□□□□□ -0.1
LSM2-212ENST00000477182 ALDH1L1O75891 902 aa14.45□□□□□ -0.1
LSM2-212ENST00000477182 PRMT2P55345 433 aa14.45□□□□□ -0.1
LSM2-212ENST00000477182 TAF1CQ15572 869 aaPredicted RBP14.45□□□□□ -0.1
LSM2-212ENST00000477182 ANKRD13AQ8IZ07 590 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms