RNA–Protein interactions for RNA: ENST00000476201.5

TARDBP-207, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-207ENST00000476201 SREBF2Q12772 1141 aa18.36■□□□□ 0.53
TARDBP-207ENST00000476201 LINS1Q8NG48 757 aa18.36■□□□□ 0.53
TARDBP-207ENST00000476201 DNAAF4Q8WXU2 420 aa18.36■□□□□ 0.53
TARDBP-207ENST00000476201 MPHOSPH8Q99549 860 aa18.36■□□□□ 0.53
TARDBP-207ENST00000476201 VAMP4O75379 141 aa18.35■□□□□ 0.53
TARDBP-207ENST00000476201 IL1R1P14778 569 aa18.35■□□□□ 0.53
TARDBP-207ENST00000476201 PRMT6Q96LA8 375 aaPredicted RBP18.35■□□□□ 0.53
TARDBP-207ENST00000476201 COL1A1P02452 1464 aaPredicted RBP18.34■□□□□ 0.53
TARDBP-207ENST00000476201 IL16Q14005 1332 aa18.34■□□□□ 0.53
TARDBP-207ENST00000476201 IGF2BP3O00425 579 aaKnown RBP eCLIP18.34■□□□□ 0.53
TARDBP-207ENST00000476201 GJA5P36382 358 aa18.34■□□□□ 0.53
TARDBP-207ENST00000476201 DLGAP5Q15398 846 aa18.34■□□□□ 0.53
TARDBP-207ENST00000476201 EPHA10Q5JZY3 1008 aa18.34■□□□□ 0.53
TARDBP-207ENST00000476201 IFNL1Q8IU54 200 aa18.34■□□□□ 0.53
TARDBP-207ENST00000476201 BRCA2P51587 3418 aa18.33■□□□□ 0.53
TARDBP-207ENST00000476201 CAP1Q01518 475 aa18.33■□□□□ 0.52
TARDBP-207ENST00000476201 SLC10A4Q96EP9 437 aa18.33■□□□□ 0.52
TARDBP-207ENST00000476201 WNK4Q96J92 1243 aa18.33■□□□□ 0.52
TARDBP-207ENST00000476201 ANKRD18BA2A2Z9 1011 aa18.32■□□□□ 0.52
TARDBP-207ENST00000476201 SPDYE2BA6NHP3 402 aa18.32■□□□□ 0.52
TARDBP-207ENST00000476201 USP2O75604 605 aaPredicted RBP18.32■□□□□ 0.52
TARDBP-207ENST00000476201 SPDYE6P0CI01 402 aa18.32■□□□□ 0.52
TARDBP-207ENST00000476201 FKBP5Q13451 457 aaPredicted RBP18.32■□□□□ 0.52
TARDBP-207ENST00000476201 CFAP100Q494V2 611 aa18.32■□□□□ 0.52
TARDBP-207ENST00000476201 BEND3Q5T5X7 828 aa18.32■□□□□ 0.52
TARDBP-207ENST00000476201 NBPF12Q5TAG4 269 aaPredicted RBP18.32■□□□□ 0.52
TARDBP-207ENST00000476201 MYH16Q9H6N6 1097 aa18.32■□□□□ 0.52
TARDBP-207ENST00000476201 KIAA0100Q14667 2235 aaKnown RBP18.32■□□□□ 0.52
TARDBP-207ENST00000476201 FANCIQ9NVI1 1328 aa18.31■□□□□ 0.52
TARDBP-207ENST00000476201 CLRN2A0PK11 232 aa18.31■□□□□ 0.52
TARDBP-207ENST00000476201 MANSC4A6NHS7 340 aaPredicted RBP18.31■□□□□ 0.52
TARDBP-207ENST00000476201 F6X3S4 739 aa18.31■□□□□ 0.52
TARDBP-207ENST00000476201 F8W031 263 aaPredicted RBP18.31■□□□□ 0.52
TARDBP-207ENST00000476201 KCNJ4P48050 445 aa18.31■□□□□ 0.52
TARDBP-207ENST00000476201 INHBEP58166 350 aa18.31■□□□□ 0.52
TARDBP-207ENST00000476201 FKBP1AP62942 108 aaKnown RBP18.31■□□□□ 0.52
TARDBP-207ENST00000476201 ZNF594Q96JF6 807 aaPredicted RBP18.31■□□□□ 0.52
TARDBP-207ENST00000476201 PTPN18Q99952 460 aa18.31■□□□□ 0.52
TARDBP-207ENST00000476201 JAG2Q9Y219 1238 aa18.31■□□□□ 0.52
TARDBP-207ENST00000476201 OTOFQ9HC10 1997 aa18.31■□□□□ 0.52
TARDBP-207ENST00000476201 ALDH1A1P00352 501 aa18.3■□□□□ 0.52
TARDBP-207ENST00000476201 ZBTB48P10074 688 aaPredicted RBP18.3■□□□□ 0.52
TARDBP-207ENST00000476201 NCBP3Q53F19 620 aaKnown RBP18.3■□□□□ 0.52
TARDBP-207ENST00000476201 OTOP1Q7RTM1 612 aa18.3■□□□□ 0.52
TARDBP-207ENST00000476201 PPP2R3BQ9Y5P8 575 aa18.3■□□□□ 0.52
TARDBP-207ENST00000476201 POTEFA5A3E0 1075 aa18.29■□□□□ 0.52
TARDBP-207ENST00000476201 IFIT5Q13325 482 aaKnown RBP18.29■□□□□ 0.52
TARDBP-207ENST00000476201 LMBR1LQ6UX01 489 aa18.29■□□□□ 0.52
TARDBP-207ENST00000476201 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.29■□□□□ 0.52
TARDBP-207ENST00000476201 RBBP6Q7Z6E9 1792 aaKnown RBP18.28■□□□□ 0.52
TARDBP-207ENST00000476201 TESPA1A2RU30 521 aaPredicted RBP18.28■□□□□ 0.52
TARDBP-207ENST00000476201 UNCXA6NJT0 531 aa18.28■□□□□ 0.52
TARDBP-207ENST00000476201 PPP1R12BO60237 982 aaPredicted RBP18.28■□□□□ 0.52
TARDBP-207ENST00000476201 EXOSC9Q06265 439 aaKnown RBP18.28■□□□□ 0.52
TARDBP-207ENST00000476201 SPINK5Q9NQ38 1064 aaPredicted RBP18.28■□□□□ 0.52
TARDBP-207ENST00000476201 TRIM17Q9Y577 477 aa18.28■□□□□ 0.52
TARDBP-207ENST00000476201 FAM205AQ6ZU69 1335 aa18.27■□□□□ 0.52
TARDBP-207ENST00000476201 RASA3Q14644 834 aa18.27■□□□□ 0.52
TARDBP-207ENST00000476201 ZNF804AQ7Z570 1209 aa18.27■□□□□ 0.52
TARDBP-207ENST00000476201 CDAN1Q8IWY9 1227 aa18.27■□□□□ 0.52
TARDBP-207ENST00000476201 TDRD7Q8NHU6 1098 aaKnown RBP18.27■□□□□ 0.52
TARDBP-207ENST00000476201 CRHR2Q13324 411 aa18.26■□□□□ 0.51
TARDBP-207ENST00000476201 SUPT20HL1Q3ZLR7 823 aa18.26■□□□□ 0.51
TARDBP-207ENST00000476201 KAZALD1Q96I82 304 aa18.26■□□□□ 0.51
TARDBP-207ENST00000476201 MS4A4AQ96JQ5 239 aa18.26■□□□□ 0.51
TARDBP-207ENST00000476201 TEPSINQ96N21 525 aa18.26■□□□□ 0.51
TARDBP-207ENST00000476201 VEZTQ9HBM0 779 aa18.26■□□□□ 0.51
TARDBP-207ENST00000476201 PTPN22Q9Y2R2 807 aa18.26■□□□□ 0.51
TARDBP-207ENST00000476201 PLIN1O60240 522 aa18.25■□□□□ 0.51
TARDBP-207ENST00000476201 SPDYE2Q495Y8 402 aa18.25■□□□□ 0.51
TARDBP-207ENST00000476201 LDHAL6AQ6ZMR3 332 aa18.25■□□□□ 0.51
TARDBP-207ENST00000476201 CD99L2Q8TCZ2 262 aa18.25■□□□□ 0.51
TARDBP-207ENST00000476201 FAM84BQ96KN1 310 aaPredicted RBP18.25■□□□□ 0.51
TARDBP-207ENST00000476201 ZNF70Q9UC06 446 aaPredicted RBP18.25■□□□□ 0.51
TARDBP-207ENST00000476201 CHMP3Q9Y3E7 222 aa18.25■□□□□ 0.51
TARDBP-207ENST00000476201 GRM8O00222 908 aa18.24■□□□□ 0.51
TARDBP-207ENST00000476201 GYG1P46976 350 aa18.24■□□□□ 0.51
TARDBP-207ENST00000476201 IREB2P48200 963 aaKnown RBP18.24■□□□□ 0.51
TARDBP-207ENST00000476201 GRIK5Q16478 980 aa18.24■□□□□ 0.51
TARDBP-207ENST00000476201 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.24■□□□□ 0.51
TARDBP-207ENST00000476201 WDR63Q8IWG1 891 aa18.24■□□□□ 0.51
TARDBP-207ENST00000476201 ANKRD13AQ8IZ07 590 aa18.24■□□□□ 0.51
TARDBP-207ENST00000476201 PUS3Q9BZE2 481 aaKnown RBP18.24■□□□□ 0.51
TARDBP-207ENST00000476201 TDRD3Q9H7E2 651 aaKnown RBP18.24■□□□□ 0.51
TARDBP-207ENST00000476201 ARAP2Q8WZ64 1704 aa18.23■□□□□ 0.51
TARDBP-207ENST00000476201 MYO1BO43795 1136 aa18.23■□□□□ 0.51
TARDBP-207ENST00000476201 CNKSR2Q8WXI2 1034 aa18.23■□□□□ 0.51
TARDBP-207ENST00000476201 RBM5P52756 815 aaKnown RBP eCLIP18.22■□□□□ 0.51
TARDBP-207ENST00000476201 CCDC57Q2TAC2 916 aa18.22■□□□□ 0.51
TARDBP-207ENST00000476201 MFSD14BQ5SR56 506 aa18.22■□□□□ 0.51
TARDBP-207ENST00000476201 INTS3Q68E01 1043 aaKnown RBP18.22■□□□□ 0.51
TARDBP-207ENST00000476201 ARMC5Q96C12 935 aa18.22■□□□□ 0.51
TARDBP-207ENST00000476201 ELP3Q9H9T3 547 aa18.22■□□□□ 0.51
TARDBP-207ENST00000476201 SERPINA10Q9UK55 444 aa18.22■□□□□ 0.51
TARDBP-207ENST00000476201 SALL2Q9Y467 1007 aaPredicted RBP18.22■□□□□ 0.51
TARDBP-207ENST00000476201 UBE4AQ14139 1066 aa18.21■□□□□ 0.51
TARDBP-207ENST00000476201 DZIP1LQ8IYY4 767 aaKnown RBP18.21■□□□□ 0.51
TARDBP-207ENST00000476201 BRI3BPQ8WY22 251 aa18.21■□□□□ 0.51
TARDBP-207ENST00000476201 OPTNQ96CV9 577 aa18.21■□□□□ 0.51
TARDBP-207ENST00000476201 ERO1AQ96HE7 468 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms