RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 IKBKEQ14164 716 aa9.61□□□□□ -0.87
TM9SF3-204ENST00000475401 C12orf49Q9H741 205 aa9.61□□□□□ -0.87
TM9SF3-204ENST00000475401 SOX13Q9UN79 622 aa9.61□□□□□ -0.87
TM9SF3-204ENST00000475401 A0A0A0MRY4 1105 aa9.6□□□□□ -0.87
TM9SF3-204ENST00000475401 EPHA1P21709 976 aa9.6□□□□□ -0.87
TM9SF3-204ENST00000475401 PIP4K2BP78356 416 aa9.6□□□□□ -0.87
TM9SF3-204ENST00000475401 PTPN12Q05209 780 aaKnown RBP9.6□□□□□ -0.87
TM9SF3-204ENST00000475401 SPRED3Q2MJR0 410 aa9.6□□□□□ -0.87
TM9SF3-204ENST00000475401 DDX54Q8TDD1 881 aaKnown RBP9.6□□□□□ -0.87
TM9SF3-204ENST00000475401 WNT8BQ93098 351 aa9.6□□□□□ -0.87
TM9SF3-204ENST00000475401 CLEC4MQ9H2X3 399 aaPredicted RBP9.6□□□□□ -0.87
TM9SF3-204ENST00000475401 ABCB6Q9NP58 842 aa9.6□□□□□ -0.87
TM9SF3-204ENST00000475401 FAM8A1Q9UBU6 413 aa9.6□□□□□ -0.87
TM9SF3-204ENST00000475401 SPATA31C1P0DKV0 1188 aa9.59□□□□□ -0.87
TM9SF3-204ENST00000475401 TXNDC11Q6PKC3 985 aa9.59□□□□□ -0.87
TM9SF3-204ENST00000475401 SLC7A3Q8WY07 619 aa9.59□□□□□ -0.87
TM9SF3-204ENST00000475401 SEC31BQ9NQW1 1179 aa9.59□□□□□ -0.87
TM9SF3-204ENST00000475401 AK5Q9Y6K8 562 aa9.59□□□□□ -0.87
TM9SF3-204ENST00000475401 ELNP15502 786 aa9.58□□□□□ -0.88
TM9SF3-204ENST00000475401 ITPKAP23677 461 aa9.58□□□□□ -0.88
TM9SF3-204ENST00000475401 FMR1NBQ8N0W7 255 aaPredicted RBP9.58□□□□□ -0.88
TM9SF3-204ENST00000475401 KLHL23Q8NBE8 558 aa9.58□□□□□ -0.88
TM9SF3-204ENST00000475401 RGS22Q8NE09 1264 aa9.58□□□□□ -0.88
TM9SF3-204ENST00000475401 OSBPL7Q9BZF2 842 aa9.58□□□□□ -0.88
TM9SF3-204ENST00000475401 AKAP2Q9Y2D5 859 aa9.58□□□□□ -0.88
TM9SF3-204ENST00000475401 FSCN2O14926 492 aa9.57□□□□□ -0.88
TM9SF3-204ENST00000475401 SORBS3O60504 671 aa9.57□□□□□ -0.88
TM9SF3-204ENST00000475401 APBA3O96018 575 aa9.57□□□□□ -0.88
TM9SF3-204ENST00000475401 DAB2P98082 770 aa9.57□□□□□ -0.88
TM9SF3-204ENST00000475401 PCDH1Q08174 1060 aa9.57□□□□□ -0.88
TM9SF3-204ENST00000475401 RPS26P11Q5JNZ5 115 aaPredicted RBP9.57□□□□□ -0.88
TM9SF3-204ENST00000475401 TMC4Q7Z404 712 aa9.57□□□□□ -0.88
TM9SF3-204ENST00000475401 VN1R5Q7Z5H4 357 aa9.57□□□□□ -0.88
TM9SF3-204ENST00000475401 FBXO11Q86XK2 927 aa9.57□□□□□ -0.88
TM9SF3-204ENST00000475401 GLIS3Q8NEA6 775 aa9.57□□□□□ -0.88
TM9SF3-204ENST00000475401 NACC1Q96RE7 527 aa9.57□□□□□ -0.88
TM9SF3-204ENST00000475401 OSGEPQ9NPF4 335 aa9.57□□□□□ -0.88
TM9SF3-204ENST00000475401 RBM47A0AV96 593 aaKnown RBP9.56□□□□□ -0.88
TM9SF3-204ENST00000475401 FAM229AH3BQW9 127 aa9.56□□□□□ -0.88
TM9SF3-204ENST00000475401 ZNF16P17020 682 aaPredicted RBP9.56□□□□□ -0.88
TM9SF3-204ENST00000475401 C19orf57Q0VDD7 668 aa9.56□□□□□ -0.88
TM9SF3-204ENST00000475401 ADAMTSL4Q6UY14 1074 aa9.56□□□□□ -0.88
TM9SF3-204ENST00000475401 ZNF576Q9H609 170 aa9.56□□□□□ -0.88
TM9SF3-204ENST00000475401 VTI1BQ9UEU0 232 aa9.56□□□□□ -0.88
TM9SF3-204ENST00000475401 TAGLNQ01995 201 aaKnown RBP9.55□□□□□ -0.88
TM9SF3-204ENST00000475401 PPP2R3AQ06190 1150 aa9.55□□□□□ -0.88
TM9SF3-204ENST00000475401 SETDB1Q15047 1291 aa9.55□□□□□ -0.88
TM9SF3-204ENST00000475401 FOXD4L4Q8WXT5 416 aaPredicted RBP9.55□□□□□ -0.88
TM9SF3-204ENST00000475401 CARD10Q9BWT7 1032 aa9.55□□□□□ -0.88
TM9SF3-204ENST00000475401 PPM1HQ9ULR3 514 aa9.55□□□□□ -0.88
TM9SF3-204ENST00000475401 USP17L7P0C7H9 530 aa9.54□□□□□ -0.88
TM9SF3-204ENST00000475401 ESRRAP11474 423 aaPredicted RBP9.54□□□□□ -0.88
TM9SF3-204ENST00000475401 FAM161BQ96MY7 647 aa9.54□□□□□ -0.88
TM9SF3-204ENST00000475401 CEP44Q9C0F1 390 aa9.54□□□□□ -0.88
TM9SF3-204ENST00000475401 SOX17Q9H6I2 414 aaPredicted RBP9.54□□□□□ -0.88
TM9SF3-204ENST00000475401 GPN3Q9UHW5 284 aaPredicted RBP9.54□□□□□ -0.88
TM9SF3-204ENST00000475401 SOX1O00570 391 aaPredicted RBP9.53□□□□□ -0.88
TM9SF3-204ENST00000475401 COL8A1P27658 744 aa9.53□□□□□ -0.88
TM9SF3-204ENST00000475401 CD68P34810 354 aaPredicted RBP9.53□□□□□ -0.88
TM9SF3-204ENST00000475401 GSTM4Q03013 218 aa9.53□□□□□ -0.88
TM9SF3-204ENST00000475401 KCNMA1Q12791 1236 aa9.53□□□□□ -0.88
TM9SF3-204ENST00000475401 SUZ12Q15022 739 aaKnown RBP9.53□□□□□ -0.88
TM9SF3-204ENST00000475401 ILDR2Q71H61 639 aa9.53□□□□□ -0.88
TM9SF3-204ENST00000475401 DEAF1O75398 565 aaPredicted RBP9.52□□□□□ -0.89
TM9SF3-204ENST00000475401 IGF2-ASQ6U949 168 aa9.52□□□□□ -0.89
TM9SF3-204ENST00000475401 RNF19AQ9NV58 838 aa9.52□□□□□ -0.89
TM9SF3-204ENST00000475401 USP21Q9UK80 565 aa9.52□□□□□ -0.89
TM9SF3-204ENST00000475401 TTF2Q9UNY4 1162 aaKnown RBP9.52□□□□□ -0.89
TM9SF3-204ENST00000475401 B3GALT4O96024 378 aa9.51□□□□□ -0.89
TM9SF3-204ENST00000475401 CYP11A1P05108 521 aa9.51□□□□□ -0.89
TM9SF3-204ENST00000475401 NRG1Q02297 640 aaPredicted RBP9.51□□□□□ -0.89
TM9SF3-204ENST00000475401 RASSF7Q02833 373 aa9.51□□□□□ -0.89
TM9SF3-204ENST00000475401 GRIK4Q16099 956 aa9.51□□□□□ -0.89
TM9SF3-204ENST00000475401 KLHDC7BQ96G42 594 aa9.51□□□□□ -0.89
TM9SF3-204ENST00000475401 TMEM39AQ9NV64 488 aa9.51□□□□□ -0.89
TM9SF3-204ENST00000475401 C9orf172C9J069 976 aa9.5□□□□□ -0.89
TM9SF3-204ENST00000475401 DLL1O00548 723 aa9.5□□□□□ -0.89
TM9SF3-204ENST00000475401 HNRNPUQ00839 825 aaKnown RBP eCLIP9.5□□□□□ -0.89
TM9SF3-204ENST00000475401 ZNF423Q2M1K9 1284 aa9.5□□□□□ -0.89
TM9SF3-204ENST00000475401 C3orf58Q8NDZ4 430 aa9.5□□□□□ -0.89
TM9SF3-204ENST00000475401 CRELD1Q96HD1 420 aa9.5□□□□□ -0.89
TM9SF3-204ENST00000475401 MRPL18Q9H0U6 180 aaKnown RBP9.5□□□□□ -0.89
TM9SF3-204ENST00000475401 SAMM50Q9Y512 469 aa9.5□□□□□ -0.89
TM9SF3-204ENST00000475401 GDF11O95390 407 aa9.49□□□□□ -0.89
TM9SF3-204ENST00000475401 NLRP12P59046 1061 aa9.49□□□□□ -0.89
TM9SF3-204ENST00000475401 AP3B2Q13367 1082 aa9.49□□□□□ -0.89
TM9SF3-204ENST00000475401 DUOXA2Q1HG44 320 aa9.49□□□□□ -0.89
TM9SF3-204ENST00000475401 HP1BP3Q5SSJ5 553 aaPredicted RBP9.49□□□□□ -0.89
TM9SF3-204ENST00000475401 TMEM151AQ8N4L1 468 aa9.49□□□□□ -0.89
TM9SF3-204ENST00000475401 GALNT11Q8NCW6 608 aa9.49□□□□□ -0.89
TM9SF3-204ENST00000475401 DCAF5Q96JK2 942 aa9.49□□□□□ -0.89
TM9SF3-204ENST00000475401 ZNF157P51786 506 aaPredicted RBP9.48□□□□□ -0.89
TM9SF3-204ENST00000475401 TPTE2Q6XPS3 522 aa9.48□□□□□ -0.89
TM9SF3-204ENST00000475401 USP26Q9BXU7 913 aa9.48□□□□□ -0.89
TM9SF3-204ENST00000475401 TAF1CQ15572 869 aaPredicted RBP9.47□□□□□ -0.89
TM9SF3-204ENST00000475401 LENG1Q96BZ8 264 aaPredicted RBP9.47□□□□□ -0.89
TM9SF3-204ENST00000475401 CORO1BQ9BR76 489 aa9.47□□□□□ -0.89
TM9SF3-204ENST00000475401 FAAP100Q0VG06 881 aa9.46□□□□□ -0.9
TM9SF3-204ENST00000475401 FOXD4L6Q3SYB3 417 aaPredicted RBP9.46□□□□□ -0.9
TM9SF3-204ENST00000475401 FOXD4L3Q6VB84 417 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms