RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 CAPN10Q9HC96 672 aa7.2□□□□□ -1.26
ECHDC1-215ENST00000475319 ZFP64Q9NPA5 681 aa7.2□□□□□ -1.26
ECHDC1-215ENST00000475319 OGFRQ9NZT2 677 aa7.2□□□□□ -1.26
ECHDC1-215ENST00000475319 PRKAG2Q9UGJ0 569 aa7.2□□□□□ -1.26
ECHDC1-215ENST00000475319 LRFN2Q9ULH4 789 aa7.2□□□□□ -1.26
ECHDC1-215ENST00000475319 CCDC196A0A1B0GTZ2 297 aa7.19□□□□□ -1.26
ECHDC1-215ENST00000475319 DHX16O60231 1041 aaKnown RBP7.19□□□□□ -1.26
ECHDC1-215ENST00000475319 ZNF76P36508 570 aa7.19□□□□□ -1.26
ECHDC1-215ENST00000475319 ZC3H12AQ5D1E8 599 aaKnown RBP7.19□□□□□ -1.26
ECHDC1-215ENST00000475319 GOLGA6L1Q8N7Z2 621 aa7.19□□□□□ -1.26
ECHDC1-215ENST00000475319 BORCS6Q96GS4 357 aa7.19□□□□□ -1.26
ECHDC1-215ENST00000475319 NUCKS1Q9H1E3 243 aaKnown RBP7.19□□□□□ -1.26
ECHDC1-215ENST00000475319 RASSF4Q9H2L5 321 aa7.19□□□□□ -1.26
ECHDC1-215ENST00000475319 ACBD3Q9H3P7 528 aa7.19□□□□□ -1.26
ECHDC1-215ENST00000475319 MAP4K5Q9Y4K4 846 aa7.19□□□□□ -1.26
ECHDC1-215ENST00000475319 CARMIL2Q6F5E8 1435 aa7.19□□□□□ -1.26
ECHDC1-215ENST00000475319 KIF27Q86VH2 1401 aa7.19□□□□□ -1.26
ECHDC1-215ENST00000475319 SHROOM2Q13796 1616 aa7.18□□□□□ -1.26
ECHDC1-215ENST00000475319 PNMA6FA0A0J9YX94 578 aa7.18□□□□□ -1.26
ECHDC1-215ENST00000475319 FIGNL2A6NMB9 653 aa7.18□□□□□ -1.26
ECHDC1-215ENST00000475319 HSPA5P11021 654 aaKnown RBP7.18□□□□□ -1.26
ECHDC1-215ENST00000475319 POLD1P28340 1107 aa7.18□□□□□ -1.26
ECHDC1-215ENST00000475319 ENOX2Q16206 610 aaKnown RBP7.18□□□□□ -1.26
ECHDC1-215ENST00000475319 STAG2Q8N3U4 1231 aa7.18□□□□□ -1.26
ECHDC1-215ENST00000475319 DHX38Q92620 1227 aaKnown RBP7.18□□□□□ -1.26
ECHDC1-215ENST00000475319 SCHIP1Q9P0W5 487 aaPredicted RBP7.18□□□□□ -1.26
ECHDC1-215ENST00000475319 SMG6Q86US8 1419 aaKnown RBP7.18□□□□□ -1.26
ECHDC1-215ENST00000475319 IBTKQ9P2D0 1353 aaPredicted RBP7.18□□□□□ -1.26
ECHDC1-215ENST00000475319 CCDC189A1A4V9 331 aa7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 TNNI2P48788 182 aa7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 ABTB2Q8N961 1025 aa7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 SLC43A3Q8NBI5 491 aa7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 ERCC4Q92889 916 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 NOL7Q9UMY1 257 aaKnown RBP7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 POLIQ9UNA4 740 aa7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 EMILIN1Q9Y6C2 1016 aa7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 A6NJY4 79 aa7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 TPM3P06753 285 aa7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 SCP2P22307 547 aa7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 ALG1LQ6GMV1 187 aa7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 DDX46Q7L014 1031 aaKnown RBP7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 ZNF784Q8NCA9 323 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 TBC1D22AQ8WUA7 517 aa7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 ZBTB9Q96C00 473 aa7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 CDK15Q96Q40 435 aa7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 LNPKQ9C0E8 428 aa7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 CXorf56Q9H5V9 222 aa7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 RAB6BQ9NRW1 208 aa7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 RSPH14Q9UHP6 348 aa7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 SUFUQ9UMX1 484 aa7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 SMC3Q9UQE7 1217 aa7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 RIPOR2Q9Y4F9 1068 aa7.17□□□□□ -1.26
ECHDC1-215ENST00000475319 DHX57Q6P158 1386 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-215ENST00000475319 SCAPERQ9BY12 1400 aa7.16□□□□□ -1.26
ECHDC1-215ENST00000475319 KIAA0586Q9BVV6 1533 aa7.16□□□□□ -1.26
ECHDC1-215ENST00000475319 H0YHG0 523 aa7.16□□□□□ -1.26
ECHDC1-215ENST00000475319 ATP2B1P20020 1258 aa7.16□□□□□ -1.26
ECHDC1-215ENST00000475319 FSHRP23945 695 aa7.16□□□□□ -1.26
ECHDC1-215ENST00000475319 ITGB7P26010 798 aa7.16□□□□□ -1.26
ECHDC1-215ENST00000475319 PSMA6P60900 246 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-215ENST00000475319 SARNPP82979 210 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-215ENST00000475319 ARID5BQ14865 1188 aa7.16□□□□□ -1.26
ECHDC1-215ENST00000475319 ATP2B3Q16720 1220 aa7.16□□□□□ -1.26
ECHDC1-215ENST00000475319 FOXD4L6Q3SYB3 417 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-215ENST00000475319 ARTNQ5T4W7 220 aa7.16□□□□□ -1.26
ECHDC1-215ENST00000475319 FOXD4L3Q6VB84 417 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-215ENST00000475319 GJD3Q8N144 294 aa7.16□□□□□ -1.26
ECHDC1-215ENST00000475319 MYO19Q96H55 970 aa7.16□□□□□ -1.26
ECHDC1-215ENST00000475319 NGLY1Q96IV0 654 aa7.16□□□□□ -1.26
ECHDC1-215ENST00000475319 LRRC4BQ9NT99 713 aa7.16□□□□□ -1.26
ECHDC1-215ENST00000475319 IQSEC3Q9UPP2 1182 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-215ENST00000475319 USP3Q9Y6I4 520 aa7.16□□□□□ -1.26
ECHDC1-215ENST00000475319 ABCC10Q5T3U5 1492 aa7.15□□□□□ -1.26
ECHDC1-215ENST00000475319 PTPRGP23470 1445 aa7.15□□□□□ -1.26
ECHDC1-215ENST00000475319 GOLGA6CA6NDK9 693 aa7.15□□□□□ -1.27
ECHDC1-215ENST00000475319 GOLGA6BA6NDN3 693 aa7.15□□□□□ -1.27
ECHDC1-215ENST00000475319 SLFN14P0C7P3 912 aa7.15□□□□□ -1.27
ECHDC1-215ENST00000475319 GOLGA6DP0CG33 693 aa7.15□□□□□ -1.27
ECHDC1-215ENST00000475319 YBX3P16989 372 aaKnown RBP eCLIP7.15□□□□□ -1.27
ECHDC1-215ENST00000475319 GNA15P30679 374 aa7.15□□□□□ -1.27
ECHDC1-215ENST00000475319 CD151P48509 253 aa7.15□□□□□ -1.27
ECHDC1-215ENST00000475319 SMTNP53814 917 aa7.15□□□□□ -1.27
ECHDC1-215ENST00000475319 GSCP56915 257 aaPredicted RBP7.15□□□□□ -1.27
ECHDC1-215ENST00000475319 DNM1Q05193 864 aaKnown RBP7.15□□□□□ -1.27
ECHDC1-215ENST00000475319 MTFR1Q15390 333 aa7.15□□□□□ -1.27
ECHDC1-215ENST00000475319 TACO1Q9BSH4 297 aaKnown RBP7.15□□□□□ -1.27
ECHDC1-215ENST00000475319 CFHR5Q9BXR6 569 aa7.15□□□□□ -1.27
ECHDC1-215ENST00000475319 KRTAP4-9Q9BYQ8 210 aa7.15□□□□□ -1.27
ECHDC1-215ENST00000475319 GOLGA6AQ9NYA3 693 aa7.15□□□□□ -1.27
ECHDC1-215ENST00000475319 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.15□□□□□ -1.27
ECHDC1-215ENST00000475319 ERCC6L2Q5T890 1561 aa7.15□□□□□ -1.27
ECHDC1-215ENST00000475319 MAPKBP1O60336 1514 aa7.14□□□□□ -1.27
ECHDC1-215ENST00000475319 CUL7Q14999 1698 aa7.14□□□□□ -1.27
ECHDC1-215ENST00000475319 EIF3JO75822 258 aaKnown RBP7.14□□□□□ -1.27
ECHDC1-215ENST00000475319 GNRH1P01148 92 aa7.14□□□□□ -1.27
ECHDC1-215ENST00000475319 SETSIPP0DME0 302 aa7.14□□□□□ -1.27
ECHDC1-215ENST00000475319 DNAJA1P31689 397 aaKnown RBP7.14□□□□□ -1.27
ECHDC1-215ENST00000475319 DDX10Q13206 875 aaKnown RBP7.14□□□□□ -1.27
ECHDC1-215ENST00000475319 BIRC2Q13490 618 aa7.14□□□□□ -1.27
ECHDC1-215ENST00000475319 CDC37Q16543 378 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms