RNA–Protein interactions for RNA: ENST00000475309.5

WIPI2-208, Transcript of WD repeat domain, phosphoinositide interacting 2, human

TSL 1 (best)

Gene WIPI2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WIPI2-208	ENST00000475309	TMC6	Q7Z403	805 aa		11.75	□□□□□ -0.53
WIPI2-208	ENST00000475309	TBC1D22A	Q8WUA7	517 aa		11.75	□□□□□ -0.53
WIPI2-208	ENST00000475309	DDX11	Q96FC9	970 aa		11.75	□□□□□ -0.53
WIPI2-208	ENST00000475309	PGBD1	Q96JS3	809 aa		11.75	□□□□□ -0.53
WIPI2-208	ENST00000475309	GGNBP2	Q9H3C7	697 aa		11.75	□□□□□ -0.53
WIPI2-208	ENST00000475309	CABP1	Q9NZU7	370 aa		11.75	□□□□□ -0.53
WIPI2-208	ENST00000475309	CFAP45	Q9UL16	551 aa		11.75	□□□□□ -0.53
WIPI2-208	ENST00000475309	GBP3	Q9H0R5	595 aa		11.74	□□□□□ -0.53
WIPI2-208	ENST00000475309	ZSWIM6	Q9HCJ5	1215 aa		11.74	□□□□□ -0.53
WIPI2-208	ENST00000475309	AKAP2	Q9Y2D5	859 aa		11.74	□□□□□ -0.53
WIPI2-208	ENST00000475309	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	11.74	□□□□□ -0.53
WIPI2-208	ENST00000475309	TUBB	P07437	444 aa		11.74	□□□□□ -0.53
WIPI2-208	ENST00000475309	CCT4	P50991	539 aa	Known RBP	11.74	□□□□□ -0.53
WIPI2-208	ENST00000475309	TSHZ3	Q63HK5	1081 aa		11.74	□□□□□ -0.53
WIPI2-208	ENST00000475309	TTLL5	Q6EMB2	1281 aa		11.74	□□□□□ -0.53
WIPI2-208	ENST00000475309	POTED	Q86YR6	584 aa		11.74	□□□□□ -0.53
WIPI2-208	ENST00000475309	RASEF	Q8IZ41	740 aa		11.74	□□□□□ -0.53
WIPI2-208	ENST00000475309	AOPEP	Q8N6M6	819 aa		11.74	□□□□□ -0.53
WIPI2-208	ENST00000475309	C19orf44	Q9H6X5	657 aa		11.74	□□□□□ -0.53
WIPI2-208	ENST00000475309	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.74	□□□□□ -0.53
WIPI2-208	ENST00000475309	ANKRD62	A6NC57	917 aa		11.74	□□□□□ -0.53
WIPI2-208	ENST00000475309	GNAI2	P04899	355 aa		11.74	□□□□□ -0.53
WIPI2-208	ENST00000475309	MKRN3	Q13064	507 aa	Known RBP	11.74	□□□□□ -0.53
WIPI2-208	ENST00000475309	BEND6	Q5SZJ8	279 aa	Predicted RBP	11.74	□□□□□ -0.53
WIPI2-208	ENST00000475309	FERMT3	Q86UX7	667 aa		11.74	□□□□□ -0.53
WIPI2-208	ENST00000475309	SLC24A3	Q9HC58	644 aa		11.74	□□□□□ -0.53
WIPI2-208	ENST00000475309	FAN1	Q9Y2M0	1017 aa		11.74	□□□□□ -0.53
WIPI2-208	ENST00000475309	CD163L1	Q9NR16	1453 aa		11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	NUTM2E	B1AL46	878 aa	Predicted RBP	11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	MAP2K1	Q02750	393 aa	Predicted RBP	11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	ST3GAL1	Q11201	340 aa		11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	IRF5	Q13568	498 aa		11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	KRT24	Q2M2I5	525 aa		11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	CNNM3	Q8NE01	707 aa		11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	ARHGEF1	Q92888	912 aa	Known RBP	11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	KCNB2	Q92953	911 aa		11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	THUMPD2	Q9BTF0	503 aa	Known RBP	11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	RAB21	Q9UL25	225 aa		11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	NHSL1	Q5SYE7	1610 aa		11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	HNRNPH1	P31943	449 aa	Known RBP	11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	ANKRD1	Q15327	319 aa		11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	ME3	Q16798	604 aa		11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	UNC5CL	Q8IV45	518 aa		11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	ZNF513	Q8N8E2	541 aa	Predicted RBP	11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	GIMAP7	Q8NHV1	300 aa		11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	MICAL1	Q8TDZ2	1067 aa		11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	SYTL4	Q96C24	671 aa	Predicted RBP	11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	ORAI2	Q96SN7	254 aa		11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	IL25	Q9H293	177 aa		11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	QTRT2	Q9H974	415 aa	Known RBP	11.73	□□□□□ -0.53
WIPI2-208	ENST00000475309	ADCY9	O60503	1353 aa		11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	GOLGA6C	A6NDK9	693 aa		11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	GOLGA6B	A6NDN3	693 aa		11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	KIN	O60870	393 aa	Known RBP	11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	PEX14	O75381	377 aa		11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	GOLGA6D	P0CG33	693 aa		11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	GBP6	Q6ZN66	633 aa		11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	CCDC73	Q6ZRK6	1079 aa		11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	LARP6	Q9BRS8	491 aa	Known RBP	11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	XPO4	Q9C0E2	1151 aa	Known RBP	11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	GOLGA6A	Q9NYA3	693 aa		11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	TFIP11	Q9UBB9	837 aa	Known RBP	11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	TUBB2A	Q13885	445 aa		11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	MCM6	Q14566	821 aa		11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	SETDB1	Q15047	1291 aa		11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	NBPF6	Q5VWK0	638 aa		11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	FAM173B	Q6P4H8	233 aa		11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	CNTROB	Q8N137	903 aa		11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	MSANTD4	Q8NCY6	345 aa		11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	RUFY2	Q8WXA3	655 aa		11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	NBPF4	Q96M43	638 aa		11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	JAKMIP1	Q96N16	626 aa	Known RBP	11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	TUBB2B	Q9BVA1	445 aa		11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	GNL3L	Q9NVN8	582 aa	Known RBP	11.72	□□□□□ -0.53
WIPI2-208	ENST00000475309	RGL2	O15211	777 aa		11.71	□□□□□ -0.53
WIPI2-208	ENST00000475309	DDR1	Q08345	913 aa		11.71	□□□□□ -0.53
WIPI2-208	ENST00000475309	LONRF3	Q496Y0	759 aa		11.71	□□□□□ -0.53
WIPI2-208	ENST00000475309	JMY	Q8N9B5	988 aa		11.71	□□□□□ -0.53
WIPI2-208	ENST00000475309	ERCC4	Q92889	916 aa	Predicted RBP	11.71	□□□□□ -0.53
WIPI2-208	ENST00000475309	EPC1	Q9H2F5	836 aa		11.71	□□□□□ -0.53
WIPI2-208	ENST00000475309	IFNK	Q9P0W0	207 aa		11.71	□□□□□ -0.53
WIPI2-208	ENST00000475309	L1RE1	Q9UN81	338 aa		11.71	□□□□□ -0.53
WIPI2-208	ENST00000475309	STK24	Q9Y6E0	443 aa		11.71	□□□□□ -0.53
WIPI2-208	ENST00000475309	ARHGEF10	O15013	1369 aa		11.71	□□□□□ -0.54
WIPI2-208	ENST00000475309	FYB1	O15117	783 aa		11.71	□□□□□ -0.54
WIPI2-208	ENST00000475309	ARHGAP6	O43182	974 aa		11.71	□□□□□ -0.54
WIPI2-208	ENST00000475309	NEDD9	Q14511	834 aa		11.71	□□□□□ -0.54
WIPI2-208	ENST00000475309	C11orf91	Q3C1V1	193 aa		11.71	□□□□□ -0.54
WIPI2-208	ENST00000475309	ESCO1	Q5FWF5	840 aa		11.71	□□□□□ -0.54
WIPI2-208	ENST00000475309	NBPF10	Q6P3W6	841 aa	Known RBP	11.71	□□□□□ -0.54
WIPI2-208	ENST00000475309	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.71	□□□□□ -0.54
WIPI2-208	ENST00000475309	NGLY1	Q96IV0	654 aa		11.71	□□□□□ -0.54
WIPI2-208	ENST00000475309	ATXN2	Q99700	1313 aa	Known RBP	11.7	□□□□□ -0.54
WIPI2-208	ENST00000475309	VWA3A	A6NCI4	1184 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms