RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 FOXN1O15353 648 aa15.4■□□□□ 0.06
SSR1-205ENST00000475213 IL1R1P14778 569 aa15.4■□□□□ 0.06
SSR1-205ENST00000475213 RARSP54136 660 aaKnown RBP15.4■□□□□ 0.06
SSR1-205ENST00000475213 GRM1Q13255 1194 aa15.4■□□□□ 0.06
SSR1-205ENST00000475213 ZNF804AQ7Z570 1209 aa15.4■□□□□ 0.06
SSR1-205ENST00000475213 OGFOD1Q8N543 542 aa15.4■□□□□ 0.06
SSR1-205ENST00000475213 HHIPL1Q96JK4 782 aa15.4■□□□□ 0.06
SSR1-205ENST00000475213 RIPOR2Q9Y4F9 1068 aa15.4■□□□□ 0.06
SSR1-205ENST00000475213 UBE4AQ14139 1066 aa15.39■□□□□ 0.05
SSR1-205ENST00000475213 NBPF9Q3BBW0 867 aa15.39■□□□□ 0.05
SSR1-205ENST00000475213 AIDAQ96BJ3 306 aa15.39■□□□□ 0.05
SSR1-205ENST00000475213 PITPNM2Q9BZ72 1349 aa15.39■□□□□ 0.05
SSR1-205ENST00000475213 WNT10BO00744 389 aa15.38■□□□□ 0.05
SSR1-205ENST00000475213 AOC2O75106 756 aa15.38■□□□□ 0.05
SSR1-205ENST00000475213 MMP14P50281 582 aa15.38■□□□□ 0.05
SSR1-205ENST00000475213 HUNKP57058 714 aa15.38■□□□□ 0.05
SSR1-205ENST00000475213 MAP2K1Q02750 393 aaPredicted RBP15.38■□□□□ 0.05
SSR1-205ENST00000475213 EVX2Q03828 476 aa15.38■□□□□ 0.05
SSR1-205ENST00000475213 LRRC24Q50LG9 513 aa15.38■□□□□ 0.05
SSR1-205ENST00000475213 KIAA0825Q8IV33 1275 aa15.38■□□□□ 0.05
SSR1-205ENST00000475213 API5Q9BZZ5 524 aaKnown RBP15.38■□□□□ 0.05
SSR1-205ENST00000475213 GBA2Q9HCG7 927 aaPredicted RBP15.38■□□□□ 0.05
SSR1-205ENST00000475213 MROH5Q6ZUA9 1318 aa15.38■□□□□ 0.05
SSR1-205ENST00000475213 CERS5Q8N5B7 392 aa15.37■□□□□ 0.05
SSR1-205ENST00000475213 C2orf69Q8N8R5 385 aa15.37■□□□□ 0.05
SSR1-205ENST00000475213 KLHDC4Q8TBB5 520 aa15.37■□□□□ 0.05
SSR1-205ENST00000475213 SP7Q8TDD2 431 aaPredicted RBP15.37■□□□□ 0.05
SSR1-205ENST00000475213 CDCA5Q96FF9 252 aa15.37■□□□□ 0.05
SSR1-205ENST00000475213 HDAC9Q9UKV0 1011 aa15.37■□□□□ 0.05
SSR1-205ENST00000475213 SCAF8Q9UPN6 1271 aaKnown RBP15.37■□□□□ 0.05
SSR1-205ENST00000475213 SASH1O94885 1247 aa15.36■□□□□ 0.05
SSR1-205ENST00000475213 MAP2K2P36507 400 aa15.36■□□□□ 0.05
SSR1-205ENST00000475213 CTCFP49711 727 aaPredicted RBP15.36■□□□□ 0.05
SSR1-205ENST00000475213 ECM29Q5VYK3 1845 aa15.36■□□□□ 0.05
SSR1-205ENST00000475213 UBTFL1P0CB47 393 aaPredicted RBP15.35■□□□□ 0.05
SSR1-205ENST00000475213 HIBADHP31937 336 aaKnown RBP15.35■□□□□ 0.05
SSR1-205ENST00000475213 GYG1P46976 350 aa15.35■□□□□ 0.05
SSR1-205ENST00000475213 RFX5P48382 616 aaPredicted RBP15.35■□□□□ 0.05
SSR1-205ENST00000475213 FKBP1AP62942 108 aaKnown RBP15.35■□□□□ 0.05
SSR1-205ENST00000475213 METTL24Q5JXM2 366 aa15.35■□□□□ 0.05
SSR1-205ENST00000475213 VGLL2Q8N8G2 317 aa15.35■□□□□ 0.05
SSR1-205ENST00000475213 TDRD7Q8NHU6 1098 aaKnown RBP15.35■□□□□ 0.05
SSR1-205ENST00000475213 ARHGAP45Q92619 1136 aa15.35■□□□□ 0.05
SSR1-205ENST00000475213 ZBED3Q96IU2 234 aaPredicted RBP15.35■□□□□ 0.05
SSR1-205ENST00000475213 FAM84BQ96KN1 310 aaPredicted RBP15.35■□□□□ 0.05
SSR1-205ENST00000475213 JAG2Q9Y219 1238 aa15.35■□□□□ 0.05
SSR1-205ENST00000475213 KIF16BQ96L93 1317 aa15.35■□□□□ 0.05
SSR1-205ENST00000475213 HNRNPUQ00839 825 aaKnown RBP eCLIP15.34■□□□□ 0.05
SSR1-205ENST00000475213 RGMBQ6NW40 437 aa15.34■□□□□ 0.05
SSR1-205ENST00000475213 F8W031 263 aaPredicted RBP15.33■□□□□ 0.04
SSR1-205ENST00000475213 PDE8BO95263 885 aa15.33■□□□□ 0.04
SSR1-205ENST00000475213 HSPA8P11142 646 aaKnown RBP15.33■□□□□ 0.04
SSR1-205ENST00000475213 LBX1P52954 281 aa15.33■□□□□ 0.04
SSR1-205ENST00000475213 PTPN12Q05209 780 aaKnown RBP15.33■□□□□ 0.04
SSR1-205ENST00000475213 PRAMEF18Q5VWM3 479 aa15.33■□□□□ 0.04
SSR1-205ENST00000475213 TNS4Q8IZW8 715 aa15.33■□□□□ 0.04
SSR1-205ENST00000475213 PRDM10Q9NQV6 1147 aa15.33■□□□□ 0.04
SSR1-205ENST00000475213 ARAP2Q8WZ64 1704 aa15.33■□□□□ 0.04
SSR1-205ENST00000475213 FAM205AQ6ZU69 1335 aa15.33■□□□□ 0.04
SSR1-205ENST00000475213 PAPPA2Q9BXP8 1791 aa15.33■□□□□ 0.04
SSR1-205ENST00000475213 EYA2O00167 538 aa15.32■□□□□ 0.04
SSR1-205ENST00000475213 BCAR3O75815 825 aa15.32■□□□□ 0.04
SSR1-205ENST00000475213 DLGAP5Q15398 846 aa15.32■□□□□ 0.04
SSR1-205ENST00000475213 INTS3Q68E01 1043 aaKnown RBP15.32■□□□□ 0.04
SSR1-205ENST00000475213 FBXO33Q7Z6M2 555 aa15.32■□□□□ 0.04
SSR1-205ENST00000475213 MTMR14Q8NCE2 650 aa15.32■□□□□ 0.04
SSR1-205ENST00000475213 ZIC5Q96T25 663 aa15.32■□□□□ 0.04
SSR1-205ENST00000475213 MEIS3Q99687 375 aa15.32■□□□□ 0.04
SSR1-205ENST00000475213 BEGAINQ9BUH8 593 aa15.32■□□□□ 0.04
SSR1-205ENST00000475213 PCDHAC2Q9Y5I4 1007 aa15.32■□□□□ 0.04
SSR1-205ENST00000475213 LRRFIP2Q9Y608 721 aaKnown RBP15.32■□□□□ 0.04
SSR1-205ENST00000475213 FAM155AB1AL88 458 aaPredicted RBP15.31■□□□□ 0.04
SSR1-205ENST00000475213 ZNF157P51786 506 aaPredicted RBP15.31■□□□□ 0.04
SSR1-205ENST00000475213 NOGQ13253 232 aa15.31■□□□□ 0.04
SSR1-205ENST00000475213 CFAP100Q494V2 611 aa15.31■□□□□ 0.04
SSR1-205ENST00000475213 MFSD14BQ5SR56 506 aa15.31■□□□□ 0.04
SSR1-205ENST00000475213 VPS37DQ86XT2 251 aa15.31■□□□□ 0.04
SSR1-205ENST00000475213 APOBEC3FQ8IUX4 373 aaKnown RBP15.31■□□□□ 0.04
SSR1-205ENST00000475213 MYH13Q9UKX3 1938 aa15.31■□□□□ 0.04
SSR1-205ENST00000475213 IPO8O15397 1037 aaKnown RBP15.3■□□□□ 0.04
SSR1-205ENST00000475213 TRIM27P14373 513 aa15.3■□□□□ 0.04
SSR1-205ENST00000475213 FGFR2P21802 821 aa15.3■□□□□ 0.04
SSR1-205ENST00000475213 FKBP1BP68106 108 aa15.3■□□□□ 0.04
SSR1-205ENST00000475213 PUM3Q15397 648 aaKnown RBP15.3■□□□□ 0.04
SSR1-205ENST00000475213 CAVIN4Q5BKX8 364 aa15.3■□□□□ 0.04
SSR1-205ENST00000475213 ATG9AQ7Z3C6 839 aa15.3■□□□□ 0.04
SSR1-205ENST00000475213 CCDC102AQ96A19 550 aa15.3■□□□□ 0.04
SSR1-205ENST00000475213 IQSEC3Q9UPP2 1182 aaPredicted RBP15.3■□□□□ 0.04
SSR1-205ENST00000475213 HDAC5Q9UQL6 1122 aa15.3■□□□□ 0.04
SSR1-205ENST00000475213 TNNQ9UQP3 1299 aa15.3■□□□□ 0.04
SSR1-205ENST00000475213 BCAMP50895 628 aa15.29■□□□□ 0.04
SSR1-205ENST00000475213 ATF7IPQ6VMQ6 1270 aa15.29■□□□□ 0.04
SSR1-205ENST00000475213 MOB2Q70IA6 237 aa15.29■□□□□ 0.04
SSR1-205ENST00000475213 FRAT1Q92837 279 aaPredicted RBP15.29■□□□□ 0.04
SSR1-205ENST00000475213 PRMT6Q96LA8 375 aaPredicted RBP15.29■□□□□ 0.04
SSR1-205ENST00000475213 SIL1Q9H173 461 aa15.29■□□□□ 0.04
SSR1-205ENST00000475213 AKAP11Q9UKA4 1901 aa15.29■□□□□ 0.04
SSR1-205ENST00000475213 AOX1Q06278 1338 aa15.28■□□□□ 0.04
SSR1-205ENST00000475213 CIAO1O76071 339 aa15.28■□□□□ 0.04
SSR1-205ENST00000475213 GNAI3P08754 354 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms