RNA–Protein interactions for RNA: ENST00000473633.1

AGAP3-212, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 1 (best)

Gene AGAP3, Length 3,751 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-212ENST00000473633 RXRAP19793 462 aa11.01□□□□□ -0.65
AGAP3-212ENST00000473633 PUS3Q9BZE2 481 aaKnown RBP11.01□□□□□ -0.65
AGAP3-212ENST00000473633 USP54Q70EL1 1684 aa11.01□□□□□ -0.65
AGAP3-212ENST00000473633 LIG1P18858 919 aa11□□□□□ -0.65
AGAP3-212ENST00000473633 LMAN1P49257 510 aa11□□□□□ -0.65
AGAP3-212ENST00000473633 ZNF165P49910 485 aa11□□□□□ -0.65
AGAP3-212ENST00000473633 ELF2Q15723 593 aa11□□□□□ -0.65
AGAP3-212ENST00000473633 TTC39AQ5SRH9 613 aa11□□□□□ -0.65
AGAP3-212ENST00000473633 NFXL1Q6ZNB6 911 aa11□□□□□ -0.65
AGAP3-212ENST00000473633 RASSF8Q8NHQ8 419 aa11□□□□□ -0.65
AGAP3-212ENST00000473633 ANKRD7Q92527 254 aa11□□□□□ -0.65
AGAP3-212ENST00000473633 DNAJC25Q9H1X3 360 aa11□□□□□ -0.65
AGAP3-212ENST00000473633 SH2B1Q9NRF2 756 aaPredicted RBP11□□□□□ -0.65
AGAP3-212ENST00000473633 HEG1Q9ULI3 1381 aa11□□□□□ -0.65
AGAP3-212ENST00000473633 ANO6Q4KMQ2 910 aa11□□□□□ -0.65
AGAP3-212ENST00000473633 LRRC24Q50LG9 513 aa11□□□□□ -0.65
AGAP3-212ENST00000473633 KAZALD1Q96I82 304 aa11□□□□□ -0.65
AGAP3-212ENST00000473633 FTOQ9C0B1 505 aaKnown RBP eCLIP11□□□□□ -0.65
AGAP3-212ENST00000473633 TMX1Q9H3N1 280 aa11□□□□□ -0.65
AGAP3-212ENST00000473633 KRBA2Q6ZNG9 492 aa11□□□□□ -0.65
AGAP3-212ENST00000473633 NAT10Q9H0A0 1025 aaKnown RBP11□□□□□ -0.65
AGAP3-212ENST00000473633 ACBD3Q9H3P7 528 aa11□□□□□ -0.65
AGAP3-212ENST00000473633 CEP126Q9P2H0 1117 aa11□□□□□ -0.65
AGAP3-212ENST00000473633 USP21Q9UK80 565 aa11□□□□□ -0.65
AGAP3-212ENST00000473633 DCCP43146 1447 aa11□□□□□ -0.65
AGAP3-212ENST00000473633 TTC41PQ6P2S7 1318 aa10.99□□□□□ -0.65
AGAP3-212ENST00000473633 SKILP12757 684 aa10.99□□□□□ -0.65
AGAP3-212ENST00000473633 CUL4AQ13619 759 aa10.99□□□□□ -0.65
AGAP3-212ENST00000473633 SNAP23O00161 211 aa10.99□□□□□ -0.65
AGAP3-212ENST00000473633 SNW1Q13573 536 aaKnown RBP10.99□□□□□ -0.65
AGAP3-212ENST00000473633 HSP90AA4PQ58FG1 418 aa10.99□□□□□ -0.65
AGAP3-212ENST00000473633 PTF1AQ7RTS3 328 aa10.99□□□□□ -0.65
AGAP3-212ENST00000473633 EFCC1Q9HA90 598 aa10.99□□□□□ -0.65
AGAP3-212ENST00000473633 IQSEC3Q9UPP2 1182 aaPredicted RBP10.99□□□□□ -0.65
AGAP3-212ENST00000473633 MTMR7Q9Y216 660 aa10.99□□□□□ -0.65
AGAP3-212ENST00000473633 MTMR6Q9Y217 621 aa10.99□□□□□ -0.65
AGAP3-212ENST00000473633 RGPD5Q99666 1765 aa10.99□□□□□ -0.65
AGAP3-212ENST00000473633 LDHAL6AQ6ZMR3 332 aa10.99□□□□□ -0.65
AGAP3-212ENST00000473633 TTC6Q86TZ1 520 aa10.99□□□□□ -0.65
AGAP3-212ENST00000473633 PDILTQ8N807 584 aa10.99□□□□□ -0.65
AGAP3-212ENST00000473633 IFIT5Q13325 482 aaKnown RBP10.98□□□□□ -0.65
AGAP3-212ENST00000473633 DHX8Q14562 1220 aaKnown RBP10.98□□□□□ -0.65
AGAP3-212ENST00000473633 STK38Q15208 465 aa10.98□□□□□ -0.65
AGAP3-212ENST00000473633 ANKRD1Q15327 319 aa10.98□□□□□ -0.65
AGAP3-212ENST00000473633 TTLL5Q6EMB2 1281 aa10.98□□□□□ -0.65
AGAP3-212ENST00000473633 DBNLQ9UJU6 430 aaKnown RBP10.98□□□□□ -0.65
AGAP3-212ENST00000473633 ZNF215Q9UL58 517 aaPredicted RBP10.98□□□□□ -0.65
AGAP3-212ENST00000473633 MORC2Q9Y6X9 1032 aaPredicted RBP10.98□□□□□ -0.65
AGAP3-212ENST00000473633 CPDO75976 1380 aa10.98□□□□□ -0.65
AGAP3-212ENST00000473633 TRDNQ13061 729 aa10.98□□□□□ -0.65
AGAP3-212ENST00000473633 VPS53Q5VIR6 699 aa10.98□□□□□ -0.65
AGAP3-212ENST00000473633 CPLX2Q6PUV4 134 aaKnown RBP10.98□□□□□ -0.65
AGAP3-212ENST00000473633 PSMD1Q99460 953 aa10.98□□□□□ -0.65
AGAP3-212ENST00000473633 STRCP1A6NGW2 1772 aa10.98□□□□□ -0.65
AGAP3-212ENST00000473633 USP8P40818 1118 aa10.98□□□□□ -0.65
AGAP3-212ENST00000473633 HNRNPH2P55795 449 aaKnown RBP10.98□□□□□ -0.65
AGAP3-212ENST00000473633 MARCH10Q8NA82 808 aaPredicted RBP10.98□□□□□ -0.65
AGAP3-212ENST00000473633 DDX19AQ9NUU7 478 aaKnown RBP10.98□□□□□ -0.65
AGAP3-212ENST00000473633 RNF216Q9NWF9 866 aaPredicted RBP10.98□□□□□ -0.65
AGAP3-212ENST00000473633 COL5A2P05997 1499 aaPredicted RBP10.97□□□□□ -0.65
AGAP3-212ENST00000473633 URI1O94763 535 aaPredicted RBP10.97□□□□□ -0.65
AGAP3-212ENST00000473633 TYRO3Q06418 890 aa10.97□□□□□ -0.65
AGAP3-212ENST00000473633 POLA2Q14181 598 aa10.97□□□□□ -0.65
AGAP3-212ENST00000473633 ARHGAP29Q52LW3 1261 aa10.97□□□□□ -0.65
AGAP3-212ENST00000473633 TNNI3KQ59H18 835 aa10.97□□□□□ -0.65
AGAP3-212ENST00000473633 METTL24Q5JXM2 366 aa10.97□□□□□ -0.65
AGAP3-212ENST00000473633 ZBTB9Q96C00 473 aa10.97□□□□□ -0.65
AGAP3-212ENST00000473633 FPGT-TNNI3KV9GXZ4 949 aa10.97□□□□□ -0.65
AGAP3-212ENST00000473633 EIF3JO75822 258 aaKnown RBP10.97□□□□□ -0.65
AGAP3-212ENST00000473633 SLFN14P0C7P3 912 aa10.97□□□□□ -0.65
AGAP3-212ENST00000473633 CALRP27797 417 aaKnown RBP10.97□□□□□ -0.65
AGAP3-212ENST00000473633 TTC31Q49AM3 519 aaPredicted RBP10.97□□□□□ -0.65
AGAP3-212ENST00000473633 NIP7Q9Y221 180 aaKnown RBP eCLIP10.97□□□□□ -0.65
AGAP3-212ENST00000473633 CLGNO14967 610 aa10.97□□□□□ -0.65
AGAP3-212ENST00000473633 CCDC158Q5M9N0 1113 aa10.97□□□□□ -0.65
AGAP3-212ENST00000473633 SALL3Q9BXA9 1300 aa10.97□□□□□ -0.65
AGAP3-212ENST00000473633 LOC102724428A0A0B4J2F2 783 aa10.96□□□□□ -0.65
AGAP3-212ENST00000473633 SIK1P57059 783 aa10.96□□□□□ -0.65
AGAP3-212ENST00000473633 LRMPQ12912 555 aa10.96□□□□□ -0.65
AGAP3-212ENST00000473633 GOLGB1Q14789 3259 aaKnown RBP10.96□□□□□ -0.65
AGAP3-212ENST00000473633 A0A1B0GUL7 405 aa10.96□□□□□ -0.65
AGAP3-212ENST00000473633 IRS4O14654 1257 aaPredicted RBP10.96□□□□□ -0.65
AGAP3-212ENST00000473633 CAVIN2O95810 425 aa10.96□□□□□ -0.65
AGAP3-212ENST00000473633 IVLP07476 585 aa10.96□□□□□ -0.65
AGAP3-212ENST00000473633 SFPQP23246 707 aaKnown RBP eCLIP10.96□□□□□ -0.65
AGAP3-212ENST00000473633 TCIRG1Q13488 830 aa10.96□□□□□ -0.65
AGAP3-212ENST00000473633 RPS6KB1P23443 525 aa10.96□□□□□ -0.66
AGAP3-212ENST00000473633 GSDMDP57764 484 aa10.96□□□□□ -0.66
AGAP3-212ENST00000473633 PTPN12Q05209 780 aaKnown RBP10.96□□□□□ -0.66
AGAP3-212ENST00000473633 TRIM29Q14134 588 aa10.96□□□□□ -0.66
AGAP3-212ENST00000473633 PI16Q6UXB8 463 aa10.96□□□□□ -0.66
AGAP3-212ENST00000473633 SLC4A9Q96Q91 983 aa10.96□□□□□ -0.66
AGAP3-212ENST00000473633 SCAND2PQ9GZW5 306 aaPredicted RBP10.96□□□□□ -0.66
AGAP3-212ENST00000473633 GOLGA8BA8MQT2 603 aa10.95□□□□□ -0.66
AGAP3-212ENST00000473633 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.95□□□□□ -0.66
AGAP3-212ENST00000473633 FSIP1Q8NA03 581 aa10.95□□□□□ -0.66
AGAP3-212ENST00000473633 NEK11Q8NG66 645 aa10.95□□□□□ -0.66
AGAP3-212ENST00000473633 MPHOSPH8Q99549 860 aa10.95□□□□□ -0.66
AGAP3-212ENST00000473633 TEX13AQ9BXU3 409 aaPredicted RBP10.95□□□□□ -0.66
AGAP3-212ENST00000473633 GPHNQ9NQX3 736 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms