RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 F8W031 263 aaPredicted RBP14.37□□□□□ -0.11
CPNE1-222ENST00000473373 EGFRP00533 1210 aa14.37□□□□□ -0.11
CPNE1-222ENST00000473373 HIBADHP31937 336 aaKnown RBP14.37□□□□□ -0.11
CPNE1-222ENST00000473373 RBM5P52756 815 aaKnown RBP eCLIP14.37□□□□□ -0.11
CPNE1-222ENST00000473373 SCARF1Q14162 830 aa14.37□□□□□ -0.11
CPNE1-222ENST00000473373 ARAP2Q8WZ64 1704 aa14.37□□□□□ -0.11
CPNE1-222ENST00000473373 IFIT1P09914 478 aaKnown RBP14.36□□□□□ -0.11
CPNE1-222ENST00000473373 MAP2K2P36507 400 aa14.36□□□□□ -0.11
CPNE1-222ENST00000473373 GYG1P46976 350 aa14.36□□□□□ -0.11
CPNE1-222ENST00000473373 MLLT1Q03111 559 aaPredicted RBP14.36□□□□□ -0.11
CPNE1-222ENST00000473373 DACT2Q5SW24 774 aa14.36□□□□□ -0.11
CPNE1-222ENST00000473373 ANGEL2Q5VTE6 544 aaKnown RBP14.36□□□□□ -0.11
CPNE1-222ENST00000473373 MEIS3Q99687 375 aa14.36□□□□□ -0.11
CPNE1-222ENST00000473373 ZNF609O15014 1411 aa14.35□□□□□ -0.11
CPNE1-222ENST00000473373 ADM5C9JUS6 153 aa14.35□□□□□ -0.11
CPNE1-222ENST00000473373 SLC34A2O95436 690 aa14.35□□□□□ -0.11
CPNE1-222ENST00000473373 SLC5A1P13866 664 aa14.35□□□□□ -0.11
CPNE1-222ENST00000473373 TRIM27P14373 513 aa14.35□□□□□ -0.11
CPNE1-222ENST00000473373 ZNF280AP59817 542 aaPredicted RBP14.35□□□□□ -0.11
CPNE1-222ENST00000473373 CHAF1AQ13111 956 aaPredicted RBP14.35□□□□□ -0.11
CPNE1-222ENST00000473373 SAPCD2Q86UD0 394 aa14.35□□□□□ -0.11
CPNE1-222ENST00000473373 C2orf69Q8N8R5 385 aa14.35□□□□□ -0.11
CPNE1-222ENST00000473373 RIPOR2Q9Y4F9 1068 aa14.35□□□□□ -0.11
CPNE1-222ENST00000473373 AK9Q5TCS8 1911 aa14.35□□□□□ -0.11
CPNE1-222ENST00000473373 EYA2O00167 538 aa14.34□□□□□ -0.11
CPNE1-222ENST00000473373 MYO1BO43795 1136 aa14.34□□□□□ -0.11
CPNE1-222ENST00000473373 SASH1O94885 1247 aa14.34□□□□□ -0.11
CPNE1-222ENST00000473373 PDE8BO95263 885 aa14.34□□□□□ -0.11
CPNE1-222ENST00000473373 TTLL12Q14166 644 aaPredicted RBP14.34□□□□□ -0.11
CPNE1-222ENST00000473373 PUM3Q15397 648 aaKnown RBP14.34□□□□□ -0.11
CPNE1-222ENST00000473373 DLGAP5Q15398 846 aa14.34□□□□□ -0.11
CPNE1-222ENST00000473373 INTS3Q68E01 1043 aaKnown RBP14.34□□□□□ -0.11
CPNE1-222ENST00000473373 C15orf52Q6ZUT6 534 aaKnown RBP14.34□□□□□ -0.11
CPNE1-222ENST00000473373 ITPRIPQ8IWB1 547 aa14.34□□□□□ -0.11
CPNE1-222ENST00000473373 PGAP2Q9UHJ9 254 aa14.34□□□□□ -0.11
CPNE1-222ENST00000473373 IQSEC3Q9UPP2 1182 aaPredicted RBP14.34□□□□□ -0.11
CPNE1-222ENST00000473373 THSD7BQ9C0I4 1608 aa14.33□□□□□ -0.11
CPNE1-222ENST00000473373 IL1R1P14778 569 aa14.33□□□□□ -0.12
CPNE1-222ENST00000473373 NF2P35240 595 aa14.33□□□□□ -0.12
CPNE1-222ENST00000473373 MMP14P50281 582 aa14.33□□□□□ -0.12
CPNE1-222ENST00000473373 GMLQ99445 158 aa14.33□□□□□ -0.12
CPNE1-222ENST00000473373 MCOLN1Q9GZU1 580 aa14.33□□□□□ -0.12
CPNE1-222ENST00000473373 CEP126Q9P2H0 1117 aa14.33□□□□□ -0.12
CPNE1-222ENST00000473373 ASTN2O75129 1339 aaPredicted RBP14.33□□□□□ -0.12
CPNE1-222ENST00000473373 SRGAP3O43295 1099 aa14.32□□□□□ -0.12
CPNE1-222ENST00000473373 GNAI2P04899 355 aa14.32□□□□□ -0.12
CPNE1-222ENST00000473373 RGS19P49795 217 aa14.32□□□□□ -0.12
CPNE1-222ENST00000473373 HUNKP57058 714 aa14.32□□□□□ -0.12
CPNE1-222ENST00000473373 NBPF9Q3BBW0 867 aa14.32□□□□□ -0.12
CPNE1-222ENST00000473373 MFSD14BQ5SR56 506 aa14.32□□□□□ -0.12
CPNE1-222ENST00000473373 DLK2Q6UY11 383 aa14.32□□□□□ -0.12
CPNE1-222ENST00000473373 DZIP1LQ8IYY4 767 aaKnown RBP14.32□□□□□ -0.12
CPNE1-222ENST00000473373 TMEM57Q8N5G2 664 aa14.32□□□□□ -0.12
CPNE1-222ENST00000473373 GBA2Q9HCG7 927 aaPredicted RBP14.32□□□□□ -0.12
CPNE1-222ENST00000473373 TNNQ9UQP3 1299 aa14.32□□□□□ -0.12
CPNE1-222ENST00000473373 AKAP11Q9UKA4 1901 aa14.32□□□□□ -0.12
CPNE1-222ENST00000473373 WNT10BO00744 389 aa14.31□□□□□ -0.12
CPNE1-222ENST00000473373 PTPN12Q05209 780 aaKnown RBP14.31□□□□□ -0.12
CPNE1-222ENST00000473373 OS9Q13438 667 aaPredicted RBP14.31□□□□□ -0.12
CPNE1-222ENST00000473373 APOBEC3FQ8IUX4 373 aaKnown RBP14.31□□□□□ -0.12
CPNE1-222ENST00000473373 CDCA5Q96FF9 252 aa14.31□□□□□ -0.12
CPNE1-222ENST00000473373 FAM84BQ96KN1 310 aaPredicted RBP14.31□□□□□ -0.12
CPNE1-222ENST00000473373 ZIC5Q96T25 663 aa14.31□□□□□ -0.12
CPNE1-222ENST00000473373 TTF2Q9UNY4 1162 aaKnown RBP14.31□□□□□ -0.12
CPNE1-222ENST00000473373 SCAF8Q9UPN6 1271 aaKnown RBP14.31□□□□□ -0.12
CPNE1-222ENST00000473373 PA2G4Q9UQ80 394 aaKnown RBP14.31□□□□□ -0.12
CPNE1-222ENST00000473373 PITPNM2Q9BZ72 1349 aa14.31□□□□□ -0.12
CPNE1-222ENST00000473373 CA12O43570 354 aa14.3□□□□□ -0.12
CPNE1-222ENST00000473373 IL15P40933 162 aaPredicted RBP14.3□□□□□ -0.12
CPNE1-222ENST00000473373 DGKZQ13574 1117 aa14.3□□□□□ -0.12
CPNE1-222ENST00000473373 ATP2B3Q16720 1220 aa14.3□□□□□ -0.12
CPNE1-222ENST00000473373 CFAP100Q494V2 611 aa14.3□□□□□ -0.12
CPNE1-222ENST00000473373 TDRD7Q8NHU6 1098 aaKnown RBP14.3□□□□□ -0.12
CPNE1-222ENST00000473373 LPIN2Q92539 896 aa14.3□□□□□ -0.12
CPNE1-222ENST00000473373 VEZTQ9HBM0 779 aa14.3□□□□□ -0.12
CPNE1-222ENST00000473373 GNL3LQ9NVN8 582 aaKnown RBP14.3□□□□□ -0.12
CPNE1-222ENST00000473373 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.3□□□□□ -0.12
CPNE1-222ENST00000473373 FBXO3Q9UK99 471 aa14.3□□□□□ -0.12
CPNE1-222ENST00000473373 CIAO1O76071 339 aa14.29□□□□□ -0.12
CPNE1-222ENST00000473373 MS4A1P11836 297 aa14.29□□□□□ -0.12
CPNE1-222ENST00000473373 RFX5P48382 616 aaPredicted RBP14.29□□□□□ -0.12
CPNE1-222ENST00000473373 BCAMP50895 628 aa14.29□□□□□ -0.12
CPNE1-222ENST00000473373 FKBP1AP62942 108 aaKnown RBP14.29□□□□□ -0.12
CPNE1-222ENST00000473373 CERS5Q8N5B7 392 aa14.29□□□□□ -0.12
CPNE1-222ENST00000473373 TBC1D22AQ8WUA7 517 aa14.29□□□□□ -0.12
CPNE1-222ENST00000473373 HHIPL1Q96JK4 782 aa14.29□□□□□ -0.12
CPNE1-222ENST00000473373 IRS2Q9Y4H2 1338 aa14.29□□□□□ -0.12
CPNE1-222ENST00000473373 PAPPA2Q9BXP8 1791 aa14.29□□□□□ -0.12
CPNE1-222ENST00000473373 CLRN2A0PK11 232 aa14.28□□□□□ -0.12
CPNE1-222ENST00000473373 G3BP1Q13283 466 aaKnown RBP eCLIP14.28□□□□□ -0.12
CPNE1-222ENST00000473373 GORABQ5T7V8 394 aa14.28□□□□□ -0.12
CPNE1-222ENST00000473373 FAM205AQ6ZU69 1335 aa14.28□□□□□ -0.12
CPNE1-222ENST00000473373 VGLL2Q8N8G2 317 aa14.28□□□□□ -0.12
CPNE1-222ENST00000473373 MYH2Q9UKX2 1941 aa14.27□□□□□ -0.12
CPNE1-222ENST00000473373 ZNF157P51786 506 aaPredicted RBP14.27□□□□□ -0.13
CPNE1-222ENST00000473373 PRKG1Q13976 671 aa14.27□□□□□ -0.13
CPNE1-222ENST00000473373 PRAMEF18Q5VWM3 479 aa14.27□□□□□ -0.13
CPNE1-222ENST00000473373 FBXO33Q7Z6M2 555 aa14.27□□□□□ -0.13
CPNE1-222ENST00000473373 NEUROD6Q96NK8 337 aa14.27□□□□□ -0.13
CPNE1-222ENST00000473373 AKAP2Q9Y2D5 859 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms