RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 LDHDQ86WU2 507 aa24.41■■□□□ 1.5
HDAC7-220ENST00000471235 TRPM4Q8TD43 1214 aa24.41■■□□□ 1.5
HDAC7-220ENST00000471235 H7C1D1 291 aa24.4■■□□□ 1.5
HDAC7-220ENST00000471235 TIMM10P62072 90 aa24.4■■□□□ 1.5
HDAC7-220ENST00000471235 USP50Q70EL3 339 aaPredicted RBP24.4■■□□□ 1.5
HDAC7-220ENST00000471235 CERS5Q8N5B7 392 aa24.4■■□□□ 1.5
HDAC7-220ENST00000471235 MYO5AQ9Y4I1 1855 aaKnown RBP24.39■■□□□ 1.5
HDAC7-220ENST00000471235 SMC1BQ8NDV3 1235 aa24.39■■□□□ 1.49
HDAC7-220ENST00000471235 EGFRP00533 1210 aa24.38■■□□□ 1.49
HDAC7-220ENST00000471235 PHKA1P46020 1223 aa24.38■■□□□ 1.49
HDAC7-220ENST00000471235 ZNF280AP59817 542 aaPredicted RBP24.38■■□□□ 1.49
HDAC7-220ENST00000471235 FKBP1AP62942 108 aaKnown RBP24.38■■□□□ 1.49
HDAC7-220ENST00000471235 SAMD7Q7Z3H4 446 aa24.38■■□□□ 1.49
HDAC7-220ENST00000471235 XAGE2Q96GT9 111 aa24.38■■□□□ 1.49
HDAC7-220ENST00000471235 GPR108Q9NPR9 543 aa24.38■■□□□ 1.49
HDAC7-220ENST00000471235 USP17L8P0C7I0 530 aa24.37■■□□□ 1.49
HDAC7-220ENST00000471235 FSTL1Q12841 308 aa24.37■■□□□ 1.49
HDAC7-220ENST00000471235 CHAF1AQ13111 956 aaPredicted RBP24.37■■□□□ 1.49
HDAC7-220ENST00000471235 TBC1D10BQ4KMP7 808 aaPredicted RBP24.37■■□□□ 1.49
HDAC7-220ENST00000471235 TNNI3KQ59H18 835 aa24.37■■□□□ 1.49
HDAC7-220ENST00000471235 CHADLQ6NUI6 762 aa24.37■■□□□ 1.49
HDAC7-220ENST00000471235 ERC1Q8IUD2 1116 aa24.37■■□□□ 1.49
HDAC7-220ENST00000471235 FPGT-TNNI3KV9GXZ4 949 aa24.37■■□□□ 1.49
HDAC7-220ENST00000471235 FRAT2O75474 233 aaPredicted RBP24.36■■□□□ 1.49
HDAC7-220ENST00000471235 HIRAP54198 1017 aaPredicted RBP24.36■■□□□ 1.49
HDAC7-220ENST00000471235 KIF4BQ2VIQ3 1234 aa24.36■■□□□ 1.49
HDAC7-220ENST00000471235 HSP90AB4PQ58FF6 505 aa24.36■■□□□ 1.49
HDAC7-220ENST00000471235 CCDC102BQ68D86 513 aa24.36■■□□□ 1.49
HDAC7-220ENST00000471235 KIAA0825Q8IV33 1275 aa24.36■■□□□ 1.49
HDAC7-220ENST00000471235 NEUROD6Q96NK8 337 aa24.36■■□□□ 1.49
HDAC7-220ENST00000471235 CLEC11AQ9Y240 323 aa24.36■■□□□ 1.49
HDAC7-220ENST00000471235 PCDHB15Q9Y5E8 787 aa24.36■■□□□ 1.49
HDAC7-220ENST00000471235 MAST2Q6P0Q8 1798 aa24.36■■□□□ 1.49
HDAC7-220ENST00000471235 MYH2Q9UKX2 1941 aa24.35■■□□□ 1.49
HDAC7-220ENST00000471235 MFSD14BQ5SR56 506 aa24.35■■□□□ 1.49
HDAC7-220ENST00000471235 GNL3LQ9NVN8 582 aaKnown RBP24.34■■□□□ 1.49
HDAC7-220ENST00000471235 RBM26Q5T8P6 1007 aaKnown RBP24.33■■□□□ 1.49
HDAC7-220ENST00000471235 RHPN1Q8TCX5 695 aa24.33■■□□□ 1.49
HDAC7-220ENST00000471235 MYOZ2Q9NPC6 264 aa24.33■■□□□ 1.49
HDAC7-220ENST00000471235 DOCK2Q92608 1830 aa24.33■■□□□ 1.48
HDAC7-220ENST00000471235 APBB1O00213 710 aa24.32■■□□□ 1.48
HDAC7-220ENST00000471235 SEMA3EO15041 775 aa24.32■■□□□ 1.48
HDAC7-220ENST00000471235 ZBTB22O15209 634 aa24.32■■□□□ 1.48
HDAC7-220ENST00000471235 MAP1SQ66K74 1059 aaPredicted RBP24.32■■□□□ 1.48
HDAC7-220ENST00000471235 TBC1D22AQ8WUA7 517 aa24.32■■□□□ 1.48
HDAC7-220ENST00000471235 DBNDD2Q9BQY9 259 aa24.32■■□□□ 1.48
HDAC7-220ENST00000471235 F8W031 263 aaPredicted RBP24.31■■□□□ 1.48
HDAC7-220ENST00000471235 RASGRF1Q13972 1273 aa24.31■■□□□ 1.48
HDAC7-220ENST00000471235 OGFOD1Q8N543 542 aa24.31■■□□□ 1.48
HDAC7-220ENST00000471235 EXOC6Q8TAG9 804 aa24.31■■□□□ 1.48
HDAC7-220ENST00000471235 EAF2Q96CJ1 260 aaPredicted RBP24.31■■□□□ 1.48
HDAC7-220ENST00000471235 KIF1BPQ96EK5 621 aa24.31■■□□□ 1.48
HDAC7-220ENST00000471235 IL1RAPL2Q9NP60 686 aa24.31■■□□□ 1.48
HDAC7-220ENST00000471235 TLR7Q9NYK1 1049 aaKnown RBP24.31■■□□□ 1.48
HDAC7-220ENST00000471235 HDAC9Q9UKV0 1011 aa24.31■■□□□ 1.48
HDAC7-220ENST00000471235 RAB11FIP3O75154 756 aa24.3■■□□□ 1.48
HDAC7-220ENST00000471235 MMP14P50281 582 aa24.3■■□□□ 1.48
HDAC7-220ENST00000471235 GRIK5Q16478 980 aa24.3■■□□□ 1.48
HDAC7-220ENST00000471235 GORABQ5T7V8 394 aa24.3■■□□□ 1.48
HDAC7-220ENST00000471235 PGAP2Q9UHJ9 254 aa24.3■■□□□ 1.48
HDAC7-220ENST00000471235 DBNLQ9UJU6 430 aaKnown RBP24.3■■□□□ 1.48
HDAC7-220ENST00000471235 DENND2AQ9ULE3 1009 aa24.3■■□□□ 1.48
HDAC7-220ENST00000471235 PDS5AQ29RF7 1337 aaKnown RBP24.3■■□□□ 1.48
HDAC7-220ENST00000471235 ARID4AP29374 1257 aaPredicted RBP24.29■■□□□ 1.48
HDAC7-220ENST00000471235 ZC3H15Q8WU90 426 aaKnown RBP24.29■■□□□ 1.48
HDAC7-220ENST00000471235 CCDC8Q9H0W5 538 aaPredicted RBP24.29■■□□□ 1.48
HDAC7-220ENST00000471235 ASTN2O75129 1339 aaPredicted RBP24.29■■□□□ 1.48
HDAC7-220ENST00000471235 AAMPQ13685 434 aa24.28■■□□□ 1.48
HDAC7-220ENST00000471235 AACSQ86V21 672 aa24.28■■□□□ 1.48
HDAC7-220ENST00000471235 WDR66Q8TBY9 1149 aa24.28■■□□□ 1.48
HDAC7-220ENST00000471235 TTF2Q9UNY4 1162 aaKnown RBP24.28■■□□□ 1.48
HDAC7-220ENST00000471235 IRX6P78412 446 aaPredicted RBP24.27■■□□□ 1.48
HDAC7-220ENST00000471235 CNTROBQ8N137 903 aa24.27■■□□□ 1.48
HDAC7-220ENST00000471235 DCTPP1Q9H773 170 aa24.27■■□□□ 1.48
HDAC7-220ENST00000471235 GGA3Q9NZ52 723 aa24.27■■□□□ 1.48
HDAC7-220ENST00000471235 PASKQ96RG2 1323 aa24.27■■□□□ 1.48
HDAC7-220ENST00000471235 SALL1Q9NSC2 1324 aa24.27■■□□□ 1.48
HDAC7-220ENST00000471235 MYH7P12883 1935 aa24.27■■□□□ 1.48
HDAC7-220ENST00000471235 ITGBL1O95965 494 aaPredicted RBP24.26■■□□□ 1.47
HDAC7-220ENST00000471235 UQCRFS1P1P0C7P4 283 aa24.26■■□□□ 1.47
HDAC7-220ENST00000471235 SCARF1Q14162 830 aa24.26■■□□□ 1.47
HDAC7-220ENST00000471235 ZBED3Q96IU2 234 aaPredicted RBP24.26■■□□□ 1.47
HDAC7-220ENST00000471235 PCDHAC2Q9Y5I4 1007 aa24.26■■□□□ 1.47
HDAC7-220ENST00000471235 WNT10BO00744 389 aa24.25■■□□□ 1.47
HDAC7-220ENST00000471235 MCAMP43121 646 aa24.25■■□□□ 1.47
HDAC7-220ENST00000471235 NBPF9Q3BBW0 867 aa24.25■■□□□ 1.47
HDAC7-220ENST00000471235 CFAP100Q494V2 611 aa24.25■■□□□ 1.47
HDAC7-220ENST00000471235 TTC39AQ5SRH9 613 aa24.25■■□□□ 1.47
HDAC7-220ENST00000471235 PI16Q6UXB8 463 aa24.25■■□□□ 1.47
HDAC7-220ENST00000471235 CLASRPQ8N2M8 674 aaKnown RBP24.25■■□□□ 1.47
HDAC7-220ENST00000471235 HMG20BQ9P0W2 317 aa24.25■■□□□ 1.47
HDAC7-220ENST00000471235 SUGT1Q9Y2Z0 365 aa24.25■■□□□ 1.47
HDAC7-220ENST00000471235 HSPA6P17066 643 aa24.24■■□□□ 1.47
HDAC7-220ENST00000471235 CCDC158Q5M9N0 1113 aa24.24■■□□□ 1.47
HDAC7-220ENST00000471235 MTMR14Q8NCE2 650 aa24.24■■□□□ 1.47
HDAC7-220ENST00000471235 GLIS2Q9BZE0 524 aaPredicted RBP24.24■■□□□ 1.47
HDAC7-220ENST00000471235 LRRCC1Q9C099 1032 aa24.24■■□□□ 1.47
HDAC7-220ENST00000471235 PRDX5P30044 214 aa24.23■■□□□ 1.47
HDAC7-220ENST00000471235 DLGAP5Q15398 846 aa24.23■■□□□ 1.47
HDAC7-220ENST00000471235 ANGEL2Q5VTE6 544 aaKnown RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 191 ms